For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_0365 | - | 100% (134) | CONSERVED HYPOTHETICAL PROTEIN | |
M. thermoresistible (build 8) | TH_3548 | - | 3e-31 | 49.22% (128) | PUTATIVE conserved hypothetical protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3571c | - | 5e-56 | 80.95% (126) | hypothetical protein Mb3571c |
M. gilvum PYR-GCK | Mflv_1512 | - | 2e-60 | 81.06% (132) | dehydratase |
M. tuberculosis H37Rv | Rv3541c | - | 5e-56 | 80.95% (126) | hypothetical protein Rv3541c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_0617 | - | 8e-53 | 75.59% (127) | hypothetical protein MAB_0617 |
M. marinum M | MMAR_5028 | - | 1e-62 | 84.73% (131) | hypothetical protein MMAR_5028 |
M. avium 104 | MAV_0620 | - | 5e-63 | 84.21% (133) | hypothetical protein MAV_0620 |
M. smegmatis MC2 155 | MSMEG_5991 | - | 2e-59 | 82.44% (131) | MaoC like domain-containing protein |
M. ulcerans Agy99 | MUL_4102 | - | 3e-61 | 85.71% (126) | hypothetical protein MUL_4102 |
M. vanbaalenii PYR-1 | Mvan_5254 | - | 6e-63 | 84.09% (132) | MaoC-like dehydratase |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_1512|M.gilvum_PYR-GCK ---MSAPSIEVGTTLPELTIYGDPTFIVSTAIATRDYQDVHHDRDKAQAK Mvan_5254|M.vanbaalenii_PYR-1 ---MSAPALEVGTKLPELKIYGDPTFIVSTAIATRDYQDVHHDRDKAQAK MSMEG_5991|M.smegmatis_MC2_155 MGAQSMTVIEVGTALPELAIYGDPTFIVSTAIATRDYQDVHHDRDKAQAK TH_0365|M.thermoresistible__bu ---MSTPVVEVGTKLPELKIHADPTFIVSTALATRDFQDVHHDRDKAQAK MMAR_5028|M.marinum_M ---MSAPTMDVGTKLPELKLHGDPTFIVSTALATRDFQDVHHDRDKAQAK MUL_4102|M.ulcerans_Agy99 --------MDVGTKLPELKLHGDPTFIVSTALATRDFQDVHHDRDKAQAK Mb3571c|M.bovis_AF2122/97 -------MTVVGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQ Rv3541c|M.tuberculosis_H37Rv -------MTVVGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQ MAV_0620|M.avium_104 ---MSAPVIEVGTTLPELKLYGDPTFIISTALATRDFQDVHHDRDKAQAK MAB_0617|M.abscessus_ATCC_1997 -------MTTVGEKLPELKLEGTPTFIVSTALATRDFQDVHHDRDLAQAK ** **** : . ****:***:****:******** * *: Mflv_1512|M.gilvum_PYR-GCK GSKDIFVNILTDTGLVQRYLTDWAGPAARIRSIGLRLGVPWYAYDTITFT Mvan_5254|M.vanbaalenii_PYR-1 GSKDIFVNILTDTGLVQRYLTDWAGPTARIKSIGLRLGVPWYAYDTITFT MSMEG_5991|M.smegmatis_MC2_155 GSKDIFVNILTDTGLVQRYLTDWAGPNARIKSIGLRLGVPWYAYDTVTFR TH_0365|M.thermoresistible__bu GSKDIFVNILTDTGLVQRYLTDWAGPAARIKSIKLRLGVPWYAYDTVTFT MMAR_5028|M.marinum_M GSKDIFVNILTDTGLVQRYVTDWAGPSALIKSIGLRLGVPWYAYDTVIFS MUL_4102|M.ulcerans_Agy99 GSKDIFVNILTDTGLVQRYVTDWAGPSALIKSIGLRLGLPWYAYDTVTFS Mb3571c|M.bovis_AF2122/97 GSKDIFVNILTDTGLVQRYVTDWAGPSALIKSIGLRLGVPWYAYDTVTFS Rv3541c|M.tuberculosis_H37Rv GSKDIFVNILTDTGLVQRYVTDWAGPSALIKSIGLRLGVPWYAYDTVTFS MAV_0620|M.avium_104 GSKDIFVNILTDTGLVQRYVTDWAGPSALIKSIGLRLGVPWYAYDTVTFS MAB_0617|M.abscessus_ATCC_1997 GSKDIFINILSDTGLVERFVTDWAGPAARVKSISLRLGVPWYAYDTTVFT ******:***:*****:*::****** * ::** ****:******* * Mflv_1512|M.gilvum_PYR-GCK GEVTAVDDDIATVKVVGANSLGNHVIATATLALGDH- Mvan_5254|M.vanbaalenii_PYR-1 GEVTAVDDGVATVKVLGSNSLGDHVIATATLSLGDR- MSMEG_5991|M.smegmatis_MC2_155 GEVTAIEDDLVTVKVTGSNSLGNHVIATATLNLGDKA TH_0365|M.thermoresistible__bu GEVTDVVDGLVTVKVVGSNSLGDHIIATTTLTMGES- MMAR_5028|M.marinum_M GEVTTIEDGLITVKVVGSNSLGNHVIATVTLTVGGA- MUL_4102|M.ulcerans_Agy99 GEVTAIEDGLITVKVVGSNSLGNHVIATVTLTVGGA- Mb3571c|M.bovis_AF2122/97 GEVTAVNDGLITVKVVGRNTLGDHVTATVELSMRDS- Rv3541c|M.tuberculosis_H37Rv GEVTAVNDGLITVKVVGRNTLGDHVTATVELSMRDS- MAV_0620|M.avium_104 GEVTAVQDGLVTLKVFGRNSLGDHVIATVTLTMGDA- MAB_0617|M.abscessus_ATCC_1997 GEVAAVEDGVVEVDVVGNNSLGAHVTAKVKLTIGAEQ ***: : *.: :.* * *:** *: *.. * :