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aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_0309 | rpsH | - | 100% (133) | PROBABLE 30S RIBOSOMAL PROTEIN S8 RPSH |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0739 | rpsH | 4e-66 | 91.67% (132) | 30S ribosomal protein S8 |
| M. gilvum PYR-GCK | Mflv_5033 | rpsH | 2e-67 | 92.42% (132) | 30S ribosomal protein S8 |
| M. tuberculosis H37Rv | Rv0718 | rpsH | 4e-66 | 91.67% (132) | 30S ribosomal protein S8 |
| M. leprae Br4923 | MLBr_01845 | rpsH | 3e-64 | 88.64% (132) | 30S ribosomal protein S8 |
| M. abscessus ATCC 19977 | MAB_3798c | rpsH | 1e-64 | 90.00% (130) | 30S ribosomal protein S8 |
| M. marinum M | MMAR_1049 | rpsH | 4e-65 | 90.15% (132) | 30S ribosomal protein S8, RpsH |
| M. avium 104 | MAV_4451 | rpsH | 4e-65 | 91.54% (130) | 30S ribosomal protein S8 |
| M. smegmatis MC2 155 | MSMEG_1469 | rpsH | 4e-67 | 92.42% (132) | 30S ribosomal protein S8 |
| M. ulcerans Agy99 | MUL_0808 | rpsH | 3e-65 | 90.15% (132) | 30S ribosomal protein S8 |
| M. vanbaalenii PYR-1 | Mvan_1336 | rpsH | 2e-68 | 93.94% (132) | 30S ribosomal protein S8 |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_1049|M.marinum_M MTMTDPIADFLTRLRNANSAYHDEVSLPHSKIKANIAQILKNEGYISDFH
MUL_0808|M.ulcerans_Agy99 MTMTDPIADFLTRLRNANSAYHDEVSLPHSKIKANIAQILKNEGYISDFH
MAV_4451|M.avium_104 --MTDPIADFLTRLRNANSAYHDEVTLPHSKLKANIAQILKNEGYISDFR
MLBr_01845|M.leprae_Br4923 MTMTDPIADFLTRLRNANSAYHDEVTVPHSNIKANIAQILKNEGYIRDFR
Mb0739|M.bovis_AF2122/97 MTMTDPIADFLTRLRNANSAYHDEVSLPHSKLKANIAQILKNEGYISDFR
Rv0718|M.tuberculosis_H37Rv MTMTDPIADFLTRLRNANSAYHDEVSLPHSKLKANIAQILKNEGYISDFR
MAB_3798c|M.abscessus_ATCC_199 --MTDPIADFLTRLRNANSAYHDEVTLPHSKIKANIAEILKREGYITDYR
MSMEG_1469|M.smegmatis_MC2_155 MTMTDPIADFLTRLRNANSAYHDEVTLPHSKLKANIAEILKREGYISDYR
Mflv_5033|M.gilvum_PYR-GCK MTMTDPIADFLTRLRNANSAYHDEVTLPHSKIKANIAEILKSEGYISDYR
Mvan_1336|M.vanbaalenii_PYR-1 MTMTDPIADFLTRLRNANSAYHDEVTLPHSKIKANIAEILKKEGYISDYR
TH_0309|M.thermoresistible__bu MTMTDPIADFLTRLRNANSAYHDEVVLPHSKLKANIAEILKKEGYIADYR
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MMAR_1049|M.marinum_M TEDARVGKSLIVQLKYGPSRERSIAGLRRVSKPGLRVYAKSTNLPRVLGG
MUL_0808|M.ulcerans_Agy99 TEDARVGKSLIVQLKYGPSRERSIAGLRRVSKPGLRVYAKSTNLPRVLGG
MAV_4451|M.avium_104 TEDARVGKSLIVQLKYGPSRERSIAGLRRVSKPGLRVYAKSTNLPRVLGG
MLBr_01845|M.leprae_Br4923 TEDARVGKSLIIQLKYGPSRERSIAGLRRVSKPGLRVYAKSINLPRVLGG
Mb0739|M.bovis_AF2122/97 TEDARVGKSLVIQLKYGPSRERSIAGLRRVSKPGLRVYAKSTNLPRVLGG
Rv0718|M.tuberculosis_H37Rv TEDARVGKSLVIQLKYGPSRERSIAGLRRVSKPGLRVYAKSTNLPRVLGG
MAB_3798c|M.abscessus_ATCC_199 TEDARVGKNLVVSLKYGPSRERSIAGLRRVSKPGLRVYAKSTNLPKVLGG
MSMEG_1469|M.smegmatis_MC2_155 TEDARVGKSLVVQLKYGPSRERSIAGLRRVSKPGLRVYAKSTNLPRVLGG
Mflv_5033|M.gilvum_PYR-GCK TEDARVGKSLVVQLKYGPSRERSIAGLRRVSKPGLRVYAKSTNLPRVLGG
Mvan_1336|M.vanbaalenii_PYR-1 TEDARVGKSLVVQLKYGPSRERSIAGLRRVSKPGLRVYAKSTNLPRVLGG
TH_0309|M.thermoresistible__bu TEDARVGKSLIIELKYGPNRERSIAGLRRVSKPGLRVYAKSTNLPRVLGG
********.*::.*****.********************** ***:****
MMAR_1049|M.marinum_M LGVAIISTSSGLLTDRQAARQGVGGEVLAYVW
MUL_0808|M.ulcerans_Agy99 LGVAIISTSSGLLTDRQAARQGVGGEVLAYVW
MAV_4451|M.avium_104 LGVAIISTSSGLLTDRQAARQGVGGEVLAYVW
MLBr_01845|M.leprae_Br4923 LGVVIISTSSGLLTDRQAARQGVGGEVLAYVW
Mb0739|M.bovis_AF2122/97 LGVAIISTSSGLLTDRQAARQGVGGEVLAYVW
Rv0718|M.tuberculosis_H37Rv LGVAIISTSSGLLTDRQAARQGVGGEVLAYVW
MAB_3798c|M.abscessus_ATCC_199 LGVAIISTSTGLLTDRQAARQGVGGEVLAYVW
MSMEG_1469|M.smegmatis_MC2_155 LGVAIISTSSGLLTDRQAARQGVGGEVLAYVW
Mflv_5033|M.gilvum_PYR-GCK LGVAIISTSSGLRTDRQASREGVGGEVLAYVW
Mvan_1336|M.vanbaalenii_PYR-1 LGVAIISTSSGLRTDRQAAREGVGGEVLAYVW
TH_0309|M.thermoresistible__bu LGVAIISTSKGLRTDRQAAREGVGGEVLAYVW
***.*****.** *****:*:***********