For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TMTDPIADFLTRLRNANSAYHDEVTVPHSNIKANIAQILKNEGYIRDFRTEDARVGKSLIIQLKYGPSRE RSIAGLRRVSKPGLRVYAKSINLPRVLGGLGVVIISTSSGLLTDRQAARQGVGGEVLAYVW*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. leprae Br4923 | MLBr_01845 | rpsH | - | 100% (132) | 30S ribosomal protein S8 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0739 | rpsH | 2e-67 | 93.94% (132) | 30S ribosomal protein S8 |
M. gilvum PYR-GCK | Mflv_5033 | rpsH | 3e-65 | 90.15% (132) | 30S ribosomal protein S8 |
M. tuberculosis H37Rv | Rv0718 | rpsH | 2e-67 | 93.94% (132) | 30S ribosomal protein S8 |
M. abscessus ATCC 19977 | MAB_3798c | rpsH | 7e-64 | 89.23% (130) | 30S ribosomal protein S8 |
M. marinum M | MMAR_1049 | rpsH | 5e-67 | 93.94% (132) | 30S ribosomal protein S8, RpsH |
M. avium 104 | MAV_4451 | rpsH | 1e-66 | 94.62% (130) | 30S ribosomal protein S8 |
M. smegmatis MC2 155 | MSMEG_1469 | rpsH | 3e-66 | 91.67% (132) | 30S ribosomal protein S8 |
M. thermoresistible (build 8) | TH_0309 | rpsH | 7e-64 | 88.64% (132) | PROBABLE 30S RIBOSOMAL PROTEIN S8 RPSH |
M. ulcerans Agy99 | MUL_0808 | rpsH | 4e-67 | 93.94% (132) | 30S ribosomal protein S8 |
M. vanbaalenii PYR-1 | Mvan_1336 | rpsH | 2e-65 | 90.91% (132) | 30S ribosomal protein S8 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_5033|M.gilvum_PYR-GCK MTMTDPIADFLTRLRNANSAYHDEVTLPHSKIKANIAEILKSEGYISDYR Mvan_1336|M.vanbaalenii_PYR-1 MTMTDPIADFLTRLRNANSAYHDEVTLPHSKIKANIAEILKKEGYISDYR Mb0739|M.bovis_AF2122/97 MTMTDPIADFLTRLRNANSAYHDEVSLPHSKLKANIAQILKNEGYISDFR Rv0718|M.tuberculosis_H37Rv MTMTDPIADFLTRLRNANSAYHDEVSLPHSKLKANIAQILKNEGYISDFR MMAR_1049|M.marinum_M MTMTDPIADFLTRLRNANSAYHDEVSLPHSKIKANIAQILKNEGYISDFH MUL_0808|M.ulcerans_Agy99 MTMTDPIADFLTRLRNANSAYHDEVSLPHSKIKANIAQILKNEGYISDFH MAV_4451|M.avium_104 --MTDPIADFLTRLRNANSAYHDEVTLPHSKLKANIAQILKNEGYISDFR MLBr_01845|M.leprae_Br4923 MTMTDPIADFLTRLRNANSAYHDEVTVPHSNIKANIAQILKNEGYIRDFR MAB_3798c|M.abscessus_ATCC_199 --MTDPIADFLTRLRNANSAYHDEVTLPHSKIKANIAEILKREGYITDYR MSMEG_1469|M.smegmatis_MC2_155 MTMTDPIADFLTRLRNANSAYHDEVTLPHSKLKANIAEILKREGYISDYR TH_0309|M.thermoresistible__bu MTMTDPIADFLTRLRNANSAYHDEVVLPHSKLKANIAEILKKEGYIADYR *********************** :***::*****:*** **** *:: Mflv_5033|M.gilvum_PYR-GCK TEDARVGKSLVVQLKYGPSRERSIAGLRRVSKPGLRVYAKSTNLPRVLGG Mvan_1336|M.vanbaalenii_PYR-1 TEDARVGKSLVVQLKYGPSRERSIAGLRRVSKPGLRVYAKSTNLPRVLGG Mb0739|M.bovis_AF2122/97 TEDARVGKSLVIQLKYGPSRERSIAGLRRVSKPGLRVYAKSTNLPRVLGG Rv0718|M.tuberculosis_H37Rv TEDARVGKSLVIQLKYGPSRERSIAGLRRVSKPGLRVYAKSTNLPRVLGG MMAR_1049|M.marinum_M TEDARVGKSLIVQLKYGPSRERSIAGLRRVSKPGLRVYAKSTNLPRVLGG MUL_0808|M.ulcerans_Agy99 TEDARVGKSLIVQLKYGPSRERSIAGLRRVSKPGLRVYAKSTNLPRVLGG MAV_4451|M.avium_104 TEDARVGKSLIVQLKYGPSRERSIAGLRRVSKPGLRVYAKSTNLPRVLGG MLBr_01845|M.leprae_Br4923 TEDARVGKSLIIQLKYGPSRERSIAGLRRVSKPGLRVYAKSINLPRVLGG MAB_3798c|M.abscessus_ATCC_199 TEDARVGKNLVVSLKYGPSRERSIAGLRRVSKPGLRVYAKSTNLPKVLGG MSMEG_1469|M.smegmatis_MC2_155 TEDARVGKSLVVQLKYGPSRERSIAGLRRVSKPGLRVYAKSTNLPRVLGG TH_0309|M.thermoresistible__bu TEDARVGKSLIIELKYGPNRERSIAGLRRVSKPGLRVYAKSTNLPRVLGG ********.*::.*****.********************** ***:**** Mflv_5033|M.gilvum_PYR-GCK LGVAIISTSSGLRTDRQASREGVGGEVLAYVW Mvan_1336|M.vanbaalenii_PYR-1 LGVAIISTSSGLRTDRQAAREGVGGEVLAYVW Mb0739|M.bovis_AF2122/97 LGVAIISTSSGLLTDRQAARQGVGGEVLAYVW Rv0718|M.tuberculosis_H37Rv LGVAIISTSSGLLTDRQAARQGVGGEVLAYVW MMAR_1049|M.marinum_M LGVAIISTSSGLLTDRQAARQGVGGEVLAYVW MUL_0808|M.ulcerans_Agy99 LGVAIISTSSGLLTDRQAARQGVGGEVLAYVW MAV_4451|M.avium_104 LGVAIISTSSGLLTDRQAARQGVGGEVLAYVW MLBr_01845|M.leprae_Br4923 LGVVIISTSSGLLTDRQAARQGVGGEVLAYVW MAB_3798c|M.abscessus_ATCC_199 LGVAIISTSTGLLTDRQAARQGVGGEVLAYVW MSMEG_1469|M.smegmatis_MC2_155 LGVAIISTSSGLLTDRQAARQGVGGEVLAYVW TH_0309|M.thermoresistible__bu LGVAIISTSKGLRTDRQAAREGVGGEVLAYVW ***.*****.** *****:*:***********