For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. smegmatis MC2 155 MSMEG_1469 (rpsH)

annotation: 30S ribosomal protein S8
coordinates: 1563476 - 1563874
length: 132

MTMTDPIADFLTRLRNANSAYHDEVTLPHSKLKANIAEILKREGYISDYRTEDARVGKSLVVQLKYGPSR
ERSIAGLRRVSKPGLRVYAKSTNLPRVLGGLGVAIISTSSGLLTDRQAARQGVGGEVLAYVW
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. smegmatis MC2 155MSMEG_1469rpsH-100% (132)30S ribosomal protein S8

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb0739rpsH5e-6996.21% (132) 30S ribosomal protein S8
M. gilvum PYR-GCKMflv_5033rpsH1e-6896.21% (132) 30S ribosomal protein S8
M. tuberculosis H37RvRv0718rpsH5e-6996.21% (132) 30S ribosomal protein S8
M. leprae Br4923MLBr_01845rpsH8e-6791.67% (132) 30S ribosomal protein S8
M. abscessus ATCC 19977MAB_3798crpsH1e-6795.38% (130) 30S ribosomal protein S8
M. marinum MMMAR_1049rpsH5e-6894.70% (132) 30S ribosomal protein S8, RpsH
M. avium 104MAV_4451rpsH3e-6896.92% (130) 30S ribosomal protein S8
M. thermoresistible (build 8)TH_0309rpsH3e-6792.42% (132) PROBABLE 30S RIBOSOMAL PROTEIN S8 RPSH
M. ulcerans Agy99MUL_0808rpsH3e-6894.70% (132) 30S ribosomal protein S8
M. vanbaalenii PYR-1Mvan_1336rpsH3e-6996.97% (132) 30S ribosomal protein S8

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_5033|M.gilvum_PYR-GCK          MTMTDPIADFLTRLRNANSAYHDEVTLPHSKIKANIAEILKSEGYISDYR
Mvan_1336|M.vanbaalenii_PYR-1       MTMTDPIADFLTRLRNANSAYHDEVTLPHSKIKANIAEILKKEGYISDYR
MSMEG_1469|M.smegmatis_MC2_155      MTMTDPIADFLTRLRNANSAYHDEVTLPHSKLKANIAEILKREGYISDYR
MAB_3798c|M.abscessus_ATCC_199      --MTDPIADFLTRLRNANSAYHDEVTLPHSKIKANIAEILKREGYITDYR
MMAR_1049|M.marinum_M               MTMTDPIADFLTRLRNANSAYHDEVSLPHSKIKANIAQILKNEGYISDFH
MUL_0808|M.ulcerans_Agy99           MTMTDPIADFLTRLRNANSAYHDEVSLPHSKIKANIAQILKNEGYISDFH
MAV_4451|M.avium_104                --MTDPIADFLTRLRNANSAYHDEVTLPHSKLKANIAQILKNEGYISDFR
MLBr_01845|M.leprae_Br4923          MTMTDPIADFLTRLRNANSAYHDEVTVPHSNIKANIAQILKNEGYIRDFR
Mb0739|M.bovis_AF2122/97            MTMTDPIADFLTRLRNANSAYHDEVSLPHSKLKANIAQILKNEGYISDFR
Rv0718|M.tuberculosis_H37Rv         MTMTDPIADFLTRLRNANSAYHDEVSLPHSKLKANIAQILKNEGYISDFR
TH_0309|M.thermoresistible__bu      MTMTDPIADFLTRLRNANSAYHDEVVLPHSKLKANIAEILKKEGYIADYR
                                      *********************** :***::*****:*** **** *::

Mflv_5033|M.gilvum_PYR-GCK          TEDARVGKSLVVQLKYGPSRERSIAGLRRVSKPGLRVYAKSTNLPRVLGG
Mvan_1336|M.vanbaalenii_PYR-1       TEDARVGKSLVVQLKYGPSRERSIAGLRRVSKPGLRVYAKSTNLPRVLGG
MSMEG_1469|M.smegmatis_MC2_155      TEDARVGKSLVVQLKYGPSRERSIAGLRRVSKPGLRVYAKSTNLPRVLGG
MAB_3798c|M.abscessus_ATCC_199      TEDARVGKNLVVSLKYGPSRERSIAGLRRVSKPGLRVYAKSTNLPKVLGG
MMAR_1049|M.marinum_M               TEDARVGKSLIVQLKYGPSRERSIAGLRRVSKPGLRVYAKSTNLPRVLGG
MUL_0808|M.ulcerans_Agy99           TEDARVGKSLIVQLKYGPSRERSIAGLRRVSKPGLRVYAKSTNLPRVLGG
MAV_4451|M.avium_104                TEDARVGKSLIVQLKYGPSRERSIAGLRRVSKPGLRVYAKSTNLPRVLGG
MLBr_01845|M.leprae_Br4923          TEDARVGKSLIIQLKYGPSRERSIAGLRRVSKPGLRVYAKSINLPRVLGG
Mb0739|M.bovis_AF2122/97            TEDARVGKSLVIQLKYGPSRERSIAGLRRVSKPGLRVYAKSTNLPRVLGG
Rv0718|M.tuberculosis_H37Rv         TEDARVGKSLVIQLKYGPSRERSIAGLRRVSKPGLRVYAKSTNLPRVLGG
TH_0309|M.thermoresistible__bu      TEDARVGKSLIIELKYGPNRERSIAGLRRVSKPGLRVYAKSTNLPRVLGG
                                    ********.*::.*****.********************** ***:****

Mflv_5033|M.gilvum_PYR-GCK          LGVAIISTSSGLRTDRQASREGVGGEVLAYVW
Mvan_1336|M.vanbaalenii_PYR-1       LGVAIISTSSGLRTDRQAAREGVGGEVLAYVW
MSMEG_1469|M.smegmatis_MC2_155      LGVAIISTSSGLLTDRQAARQGVGGEVLAYVW
MAB_3798c|M.abscessus_ATCC_199      LGVAIISTSTGLLTDRQAARQGVGGEVLAYVW
MMAR_1049|M.marinum_M               LGVAIISTSSGLLTDRQAARQGVGGEVLAYVW
MUL_0808|M.ulcerans_Agy99           LGVAIISTSSGLLTDRQAARQGVGGEVLAYVW
MAV_4451|M.avium_104                LGVAIISTSSGLLTDRQAARQGVGGEVLAYVW
MLBr_01845|M.leprae_Br4923          LGVVIISTSSGLLTDRQAARQGVGGEVLAYVW
Mb0739|M.bovis_AF2122/97            LGVAIISTSSGLLTDRQAARQGVGGEVLAYVW
Rv0718|M.tuberculosis_H37Rv         LGVAIISTSSGLLTDRQAARQGVGGEVLAYVW
TH_0309|M.thermoresistible__bu      LGVAIISTSKGLRTDRQAAREGVGGEVLAYVW
                                    ***.*****.** *****:*:***********