For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_0278 | - | - | 100% (277) | gluconolactonase |
M. thermoresistible (build 8) | TH_0100 | - | 2e-06 | 27.20% (239) | CONSERVED HYPOTHETICAL PROTEIN |
M. thermoresistible (build 8) | TH_3744 | - | 4e-05 | 26.09% (161) | PUTATIVE - |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_4109 | - | 1e-107 | 71.06% (273) | SMP-30/gluconolaconase/LRE domain-containing protein |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_3680 | - | 3e-12 | 29.38% (177) | strictosidine synthase family protein |
M. marinum M | MMAR_0391 | - | 1e-115 | 72.79% (272) | hypothetical protein MMAR_0391 |
M. avium 104 | MAV_5132 | - | 1e-112 | 71.79% (273) | senescence marker protein-30 (SMP-30) |
M. smegmatis MC2 155 | MSMEG_2561 | - | 1e-107 | 69.34% (274) | gluconolactonase |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_2237 | - | 1e-106 | 71.00% (269) | SMP-30/gluconolaconase/LRE domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_4109|M.gilvum_PYR-GCK ----------------MT-------LTPLADGFCFGEGPR----WFEGLV Mvan_2237|M.vanbaalenii_PYR-1 ----------------MT-------LTSLANGFCFGEGPR----WFEGLV MSMEG_2561|M.smegmatis_MC2_155 ----------------MTTEAGPERTTELATGFCFGEGPR----WFEGLL MMAR_0391|M.marinum_M ----------MHDTFAVICNGTRREVSPLARGFCFGEGPR----WFEGLL MAV_5132|M.avium_104 ----------------MIP-------EPLVNGFCFGEGPR----WFEGLL TH_0278|M.thermoresistible__bu ----------------VLN------PTPLAKGFCFGEGPR----WFEGLL MAB_3680|M.abscessus_ATCC_1997 MAKPSIDPVRWQPPGVRALSLEPQPLPRLSIVALPGHGPEDVVADAAGNI * *.**. * : Mflv_4109|M.gilvum_PYR-GCK WFSDMLG---EAVHTVTLDGATSTLALPGHAPSGLGFRPDGTLLIVSTEL Mvan_2237|M.vanbaalenii_PYR-1 WFSDMLG---EAVHTVTLAGEMSTLQLAGHAPSGLGFRPDGSLLIVSTER MSMEG_2561|M.smegmatis_MC2_155 WFSDMLG---EAVHTVTLGGSMTTLPLPGHAPSGLGFRPDGTLYIVSTEK MMAR_0391|M.marinum_M WFSDMLG---EAVHTSDMHGSLTTLPLPGHSPCGLGFRPDGTLLIASAHD MAV_5132|M.avium_104 WFSDMLG---EAVHTTTMGGALTTLPLPGHCPSGLGFRPDGSLLIASTRD TH_0278|M.thermoresistible__bu WFSDMLG---EAVHTVDLNGSMTTLPLPGHAPSGLGFRPDGSLLIASTEA MAB_3680|M.abscessus_ATCC_1997 WAGVADGRIFRISPDDTEGAAVTHVATTEHPPLGLHIARDGRVLICSRDK * . * . . : : . * * ** : ** : * * Mflv_4109|M.gilvum_PYR-GCK RQVLGYDGETVVTVADLSALVPANLGDMTVD-RHGCAYVGS--------- Mvan_2237|M.vanbaalenii_PYR-1 RQILGYDGDSVTTVADLSAMVPAALGDMVID-RHGGAYVGS--------- MSMEG_2561|M.smegmatis_MC2_155 RQVLCYDGETVELLADLHQVAPAPLGDMVLD-ERGRAYVGS--------- MMAR_0391|M.marinum_M RLVLRYDGDTVVTVADLRDLAPADLGDMVID-RAGRAYIGC--------- MAV_5132|M.avium_104 RRVLRYDGETVVTVAELADIAPADLGDMVVD-RAGRAYIGC--------- TH_0278|M.thermoresistible__bu RCVLRYDGETVTTIADLSAFAPDNLGDMVVD-DAGRAYVGS--------- MAB_3680|M.abscessus_ATCC_1997 LLALDPASGKIEPVVTKVDGPPLIFCSNVTESMDGTIYFSESTARFPFEQ * . .: :. * : . . : * *.. Mflv_4109|M.gilvum_PYR-GCK ------QARDGGVIVRVDPDT--GRATVVAENLQFPNGMALTADGATLIV Mvan_2237|M.vanbaalenii_PYR-1 ------QAREGGVIVRVDPDG--RTCEVVAEDLQFPNGMAITADGATLIV MSMEG_2561|M.smegmatis_MC2_155 ------QARGGGVIVRIDPDDPVEPIRVVAEGLDFPNGMAITPDGETLIV MMAR_0391|M.marinum_M ------QSFSGGVIIRLDTDNS---AQVVAEDLDFPNGMVITPDHDTLIV MAV_5132|M.avium_104 ------QAFTRGAIIRLDPDDR---AKVVADDLDFPNGMAITPDGATLIV TH_0278|M.thermoresistible__bu ------QAYSGGVIVRVDPDDPDDPVTVVAEDLDFPNGMVITEDRSTLIV MAB_3680|M.abscessus_ATCC_1997 FMAAILEGRPTGRVFRRDPDGT---VTTIATGLAFTNGVTITADGSALII :. * :.* *.* .:* .* *.**:.:* * :**: Mflv_4109|M.gilvum_PYR-GCK AESTGRRLTAYSVADDGTLSDRRIFADGLDGPPDGICLDDEGGVWVGMT- Mvan_2237|M.vanbaalenii_PYR-1 AESTGRRLTAFTIAEDGSLSGRRVFADGLDGPPDGICLDAAGGVWVAMT- MSMEG_2561|M.smegmatis_MC2_155 AESTARRLTAYTVDEDGDLSDRRIFAEGLDGPPDGIAIDLEGGVWTALT- MMAR_0391|M.marinum_M AESVGRRLSAFTVSADGALNDRRVFAAGLDGPPDGIALDAEGAVWAAMT- MAV_5132|M.avium_104 AESTGRRLSAFAIDDDGALSGRRVFADGLDGPPDGIALDADGGVWAAMT- TH_0278|M.thermoresistible__bu AESIGRRLTSYRIAADGTLTDREVFADGLDGPPDGIALDAAGAVWTSMT- MAB_3680|M.abscessus_ATCC_1997 AETVGRRVSRYALTG-PAAGTLTPIVEEIPGMPDNISTGADGRIWITLAS **: .**:: : : :. : * **.*. . * :* :: Mflv_4109|M.gilvum_PYR-GCK -----LAHQFERVVETGG-QARVTDRIDMG-GRTAIACTLGGPEGRTLFL Mvan_2237|M.vanbaalenii_PYR-1 -----LAHQFERIEEGG----EVTDRIDIG-ARTAIACTLGGPEDRTLFM MSMEG_2561|M.smegmatis_MC2_155 -----LAHEFQRIVDSGPGTPTVTDRIDAG-GRTAIACALGGAEGRTLFL MMAR_0391|M.marinum_M -----LAHQFERIVAGG----VVTDRIDMG-DRVAIACALGGPGRRTLFL MAV_5132|M.avium_104 -----LAHQFERIVAGG----AVTDRIDIG-DRVAIACALGGPQRRTLFL TH_0278|M.thermoresistible__bu -----LAHRFDRILPGG----EVTDRIDIG-GRAAIACALGGPGRNLLFL MAB_3680|M.abscessus_ATCC_1997 PRNALAEWLLPRSPAIRKVLWRLPDALLPGTDTDPWVIAVNPDTGDVLAN : * :.* : * . . ::. * Mflv_4109|M.gilvum_PYR-GCK VTTTDAYPERLRGTTLS--RLDAVTVDVPAAG--FVGEVHVH---- Mvan_2237|M.vanbaalenii_PYR-1 LTAADAYPERLRGTTLS--RLDATTVDIPAAS--PA---------- MSMEG_2561|M.smegmatis_MC2_155 VTTTDAYPQRLVGTKLS--RIEALDVAVPAPGDFAVGDHHHH---- MMAR_0391|M.marinum_M LSSTDAYPKRLIGTRLS--QLDAVTVATPGAG--LP---------- MAV_5132|M.avium_104 LSSTDAYPQRLVGTRLS--RLDAVTVTTPGAG--LP---------- TH_0278|M.thermoresistible__bu LSTTDAYPKRLIGTQSA--RLDVVKVDVAGAG--LP---------- MAB_3680|M.abscessus_ATCC_1997 ITGKSRDLRTVTGVVESGGRLWMGCIGSSAVGHISLADIASSSSGP :: . . : *. : :: : .. .