For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SRVQISTVLAIDTATPAVTAGIVRRHDLVVLGERVTVDARAHAERLTPNVLAALADAALTMADLDAVVVG CGPGPFTGLRAGMASAAAYGHALGIPVYGVCSLDAIGGQTIGDTLVVTDARRREVYWARYCDGIRTVGPA VNAAADVDPGPALAVAGAPEHAALFALPCVEPSRPSPAGLVAAVNWADKPAPLVPLYLRRPDAKPLAVCT *
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv3421c | - | - | 100% (211) | hypothetical protein Rv3421c |
M. tuberculosis H37Rv | Rv3419c | gcp | 2e-07 | 31.50% (127) | putative DNA-binding/iron metalloprotein/AP endonuclease |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3455c | - | 1e-119 | 100.00% (211) | hypothetical protein Mb3455c |
M. gilvum PYR-GCK | Mflv_4931 | - | 2e-76 | 73.13% (201) | peptidase M22, glycoprotease |
M. leprae Br4923 | MLBr_00378 | - | 1e-83 | 75.61% (205) | putative acetyltransferase |
M. abscessus ATCC 19977 | MAB_3736c | - | 1e-63 | 59.61% (203) | hypothetical protein MAB_3736c |
M. marinum M | MMAR_1122 | - | 3e-89 | 80.00% (205) | hypothetical protein MMAR_1122 |
M. avium 104 | MAV_4369 | - | 2e-87 | 79.60% (201) | peptidase M22, glycoprotease |
M. smegmatis MC2 155 | MSMEG_1578 | - | 9e-78 | 71.01% (207) | peptidase M22, glycoprotease |
M. thermoresistible (build 8) | TH_1691 | - | 2e-71 | 69.12% (204) | CONSERVED HYPOTHETICAL PROTEIN |
M. ulcerans Agy99 | MUL_0882 | - | 2e-89 | 80.00% (205) | hypothetical protein MUL_0882 |
M. vanbaalenii PYR-1 | Mvan_1487 | - | 7e-77 | 73.13% (201) | peptidase M22, glycoprotease |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_4931|M.gilvum_PYR-GCK ----MSRLVLAVDTATPAVTAGIVRV-DGDAIEVLAEQVTVDARAHAEQL Mvan_1487|M.vanbaalenii_PYR-1 ----MSRLVLAIDTATPAVTAGVLRV-DGDAVEVLAEQVTVDARAHAERL MSMEG_1578|M.smegmatis_MC2_155 ----MTRTVLTIDTATPAVSAGVVRLSDGEAPATLAERVTIDARAHAEQL Rv3421c|M.tuberculosis_H37Rv MSRVQISTVLAIDTATPAVTAGIVRR-H--DLVVLGERVTVDARAHAERL Mb3455c|M.bovis_AF2122/97 MSRVQISTVLAIDTATPAVTAGIVRR-H--DLVVLGERVTVDARAHAERL MMAR_1122|M.marinum_M -----MTIILALDTSTPAVTAGVVQL-TGSECVALAERVTVDARAHAERL MUL_0882|M.ulcerans_Agy99 -----MTIILALDTSTPAVTAGVVQL-TGSECVALAERVTVDARAHAERL MAV_4369|M.avium_104 ----MSPLVLALDTSTPAVTAGIVRR-D--DLSVLAQRITVDARAHAERL MLBr_00378|M.leprae_Br4923 -----MSIVLAIDTATAAVTAGIVAF-DGHDCFTLAERVTVDAKAHVERL TH_1691|M.thermoresistible__bu ----MTMLILTIDTATPAVSAGVVRR-TPAGEELLAEKVTVDARAHAERL MAB_3736c|M.abscessus_ATCC_199 -----MTLILALDTATAAITAGLVRRAPDGSVQPLAERITMGAKGHAEAL :*::**:*.*::**:: *.:::*:.*:.*.* * Mflv_4931|M.gilvum_PYR-GCK TPNIVAALGDAGIDASRLDAVVVGCGPGPFTGLRVGMATAAAFGHALGVP Mvan_1487|M.vanbaalenii_PYR-1 TPNIVDALADAGVSVGQLDAVVVGCGPGPFTGLRVGMATAAAFGHALGVP MSMEG_1578|M.smegmatis_MC2_155 TPNIVAALGDAGITAGDLDAVVVGCGPGPFTGLRVGMASAAAFAHAIGVP Rv3421c|M.tuberculosis_H37Rv TPNVLAALADAALTMADLDAVVVGCGPGPFTGLRAGMASAAAYGHALGIP Mb3455c|M.bovis_AF2122/97 TPNVLAALADAALTMADLDAVVVGCGPGPFTGLRAGMASAAAYGHALGIP MMAR_1122|M.marinum_M TPNVLAALAGAALTMADLNAVVVGCGPGPFTGLRAGMATGAAYGHALDIP MUL_0882|M.ulcerans_Agy99 TPNVLAALAGAALTMADLNAVVVGCGPGPFTGLRAGMATGAAYGHALDIP MAV_4369|M.avium_104 TPNVLAALRDSGLNMTDLAAVVVGCGPGPFTGLRAGMATAAAYGHALGIP MLBr_00378|M.leprae_Br4923 TPNVLVALADAELAMCELDAVVVGCGPGPFTGLRVGMATAAAYGHALGIP TH_1691|M.thermoresistible__bu TPNVVAALAEAGLAFDDLDAVVVGCGPGPFTGLRVGMASAAAYGHALDIP MAB_3736c|M.abscessus_ATCC_199 TPNIGVACADAGVAVGDLGAIVVGCGPGPFTGLRVGMATAAAMGLALDIP ***: * : : * *:*************.***:.** . *:.:* Mflv_4931|M.gilvum_PYR-GCK VHGVCSLDAIA---AGTTGDVLVVTDARRREVYWARYRDGRRVDGPAVNS Mvan_1487|M.vanbaalenii_PYR-1 VRGVCSLDAIA---AGSTGDVLVVTDARRREVYWARYRDGLRVDGPAVNA MSMEG_1578|M.smegmatis_MC2_155 VHGVCSLDAIG---GDTRGDVLVVTDARRREVYWARYHDGARVAGPSVNA Rv3421c|M.tuberculosis_H37Rv VYGVCSLDAIG---GQTIGDTLVVTDARRREVYWARYCDGIRTVGPAVNA Mb3455c|M.bovis_AF2122/97 VYGVCSLDAIG---GQTIGDTLVVTDARRREVYWARYCDGIRTVGPAVNA MMAR_1122|M.marinum_M VYGVCSLDAIG---GLTTGDTLVVTDARRREVYWARYRDGVRTHGPAVNA MUL_0882|M.ulcerans_Agy99 VYGVCSLDAIG---GLTTGDTLVVTDARRREVYWARYRDGVRTHGPAVNA MAV_4369|M.avium_104 VHGVCSLDAIG---GQTTGDTLVVTGARRREVYWARYRDGVRTDGPAVAA MLBr_00378|M.leprae_Br4923 VHGVCSLDAIG---VRTTGDTLVVTDARRHEVYWARYRDGVRIAGPAVGS TH_1691|M.thermoresistible__bu VHGVCSLDAIGVDTADTAGHVLVVTDARRREVYWARYRGGVRTDGPAVDS MAB_3736c|M.abscessus_ATCC_199 VYPVCTLDAIG---HGTAGRVLVVTDARRREVYWAGYSDGVRVSGPAVDA * **:****. : * .****.***:***** * .* * **:* : Mflv_4931|M.gilvum_PYR-GCK AVDVP----AGAAAVAGSPEHTALFELPRLAPVYPSAAGLVAAVRDWDTD Mvan_1487|M.vanbaalenii_PYR-1 AVDVP----GGADAVAGSPEHAALFELPRLAPVYPTAAGLVAAVADWVSE MSMEG_1578|M.smegmatis_MC2_155 PADVPALLDAPVAAVAGSPAHTALFDLPVLEQVYPTPAGLVAAVADWD-D Rv3421c|M.tuberculosis_H37Rv AADVDP---GPALAVAGAPEHAALFALPCVEPSRPSPAGLVAAVN-WADK Mb3455c|M.bovis_AF2122/97 AADVDP---GPALAVAGAPEHAALFALPCVEPSRPSPAGLVAAVN-WADK MMAR_1122|M.marinum_M PGDVDP---GTAHAVAGSPEHAGLFDLPRCEPSYPTVAGLAAAVN-WAQD MUL_0882|M.ulcerans_Agy99 PGDVDP---GTAHAVAGSPEHAGLFDLPRCEPSYPTVAGLAAAVN-WAQD MAV_4369|M.avium_104 PADVDP---GGAEAVAGSPEHARLFGLPVTGPAHPTPAGLVAAVGDWSVR MLBr_00378|M.leprae_Br4923 PTDVDP---GTALTVAGSPEHAALFGLPLCEPIYPTPAGLVAAVPDWSVS TH_1691|M.thermoresistible__bu PADVPT-----ADAVAGSRDHIGLFDLPALPPARPTPVGLVRVVPDWDSP MAB_3736c|M.abscessus_ATCC_199 PADVSL---DGYTQVAGSPDHTTLFDLPAVDRHYPSPSRLVQVAG-WDEP . ** ***: * ** ** *: *. .. * Mflv_4931|M.gilvum_PYR-GCK PAPLVPLYLRRPDAKPSQAVKR---------------------------- Mvan_1487|M.vanbaalenii_PYR-1 PDPLVPLYLRRPDAKPPRAVAR---------------------------- MSMEG_1578|M.smegmatis_MC2_155 PQPLVPLYLRRPDAKPSAAVKR---------------------------- Rv3421c|M.tuberculosis_H37Rv PAPLVPLYLRRPDAKPLAVCT----------------------------- Mb3455c|M.bovis_AF2122/97 PAPLVPLYLRRPDAKPLAVCT----------------------------- MMAR_1122|M.marinum_M PAPLVPLYLRRPDAKPLAARP----------------------------- MUL_0882|M.ulcerans_Agy99 PAPLVPLYLRRPDAKPLAARP----------------------------- MAV_4369|M.avium_104 PQPLVPLYLRRPDATPRAARP----------------------------- MLBr_00378|M.leprae_Br4923 PIPLVALYLRRPDAKPITADNEPIVIGTLTPADVDRCAQLESQFFDGDNP TH_1691|M.thermoresistible__bu PAALKPLYLRRPDAKPAVARNR---------------------------- MAB_3736c|M.abscessus_ATCC_199 PGALTPLYLRRPDAKEPRR------------------------------- * .* .********. Mflv_4931|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_1487|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_1578|M.smegmatis_MC2_155 -------------------------------------------------- Rv3421c|M.tuberculosis_H37Rv -------------------------------------------------- Mb3455c|M.bovis_AF2122/97 -------------------------------------------------- MMAR_1122|M.marinum_M -------------------------------------------------- MUL_0882|M.ulcerans_Agy99 -------------------------------------------------- MAV_4369|M.avium_104 -------------------------------------------------- MLBr_00378|M.leprae_Br4923 WPAAAFDRELANSYNCYVGARTADTLVGYAGITRLGHTPPFEYEVHTIAV TH_1691|M.thermoresistible__bu -------------------------------------------------- MAB_3736c|M.abscessus_ATCC_199 -------------------------------------------------- Mflv_4931|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_1487|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_1578|M.smegmatis_MC2_155 -------------------------------------------------- Rv3421c|M.tuberculosis_H37Rv -------------------------------------------------- Mb3455c|M.bovis_AF2122/97 -------------------------------------------------- MMAR_1122|M.marinum_M -------------------------------------------------- MUL_0882|M.ulcerans_Agy99 -------------------------------------------------- MAV_4369|M.avium_104 -------------------------------------------------- MLBr_00378|M.leprae_Br4923 DPAYRGRGVGRRLLGELLDFAGSGAIYLEVRTDNETAIALYRSVGFERIG TH_1691|M.thermoresistible__bu -------------------------------------------------- MAB_3736c|M.abscessus_ATCC_199 -------------------------------------------------- Mflv_4931|M.gilvum_PYR-GCK --------------------- Mvan_1487|M.vanbaalenii_PYR-1 --------------------- MSMEG_1578|M.smegmatis_MC2_155 --------------------- Rv3421c|M.tuberculosis_H37Rv --------------------- Mb3455c|M.bovis_AF2122/97 --------------------- MMAR_1122|M.marinum_M --------------------- MUL_0882|M.ulcerans_Agy99 --------------------- MAV_4369|M.avium_104 --------------------- MLBr_00378|M.leprae_Br4923 LRPRYYPASGADAYLMRREAQ TH_1691|M.thermoresistible__bu --------------------- MAB_3736c|M.abscessus_ATCC_199 ---------------------