For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
IASVRGEVLEVALDHVVIEAAGVGYRVNATPATLATLRQGTEARLITAMIVREDSMTLYGFPDGETRDLF LTLLSVSGVGPRLAMAALAVHDAPALRQVLADGNVAALTRVPGIGKRGAERMVLELRDKVGVAATGGALS TNGHAVRSPVVEALVGLGFAAKQAEEATDTVLAANHDATTSSALRSALSLLGKAR*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv2593c | ruvA | - | 100% (196) | Holliday junction DNA helicase motor protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2624c | ruvA | 1e-104 | 100.00% (196) | Holliday junction DNA helicase RuvA |
M. gilvum PYR-GCK | Mflv_3825 | ruvA | 8e-74 | 70.10% (194) | Holliday junction DNA helicase motor protein |
M. leprae Br4923 | MLBr_00482 | ruvA | 1e-76 | 76.35% (203) | Holliday junction DNA helicase RuvA |
M. abscessus ATCC 19977 | MAB_2883c | - | 5e-74 | 73.27% (202) | Holliday junction DNA helicase RuvA |
M. marinum M | MMAR_2110 | ruvA | 2e-86 | 84.77% (197) | Holliday junction DNA helicase RuvA |
M. avium 104 | MAV_3474 | ruvA | 1e-85 | 83.92% (199) | Holliday junction DNA helicase motor protein |
M. smegmatis MC2 155 | MSMEG_2944 | ruvA | 3e-82 | 78.87% (194) | Holliday junction DNA helicase motor protein |
M. thermoresistible (build 8) | TH_1491 | - | 1e-17 | 69.70% (66) | CONSERVED HYPOTHETICAL PROTEIN |
M. ulcerans Agy99 | MUL_1715 | ruvA | 1e-86 | 84.77% (197) | Holliday junction DNA helicase RuvA |
M. vanbaalenii PYR-1 | Mvan_2574 | ruvA | 2e-74 | 71.13% (194) | Holliday junction DNA helicase motor protein |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_3825|M.gilvum_PYR-GCK -------------------------MIASVRGEVLDIALDHVVIEAAGVG Mvan_2574|M.vanbaalenii_PYR-1 -------------------------MIAAVRGEVLDIALDHVVIEAAGVG MSMEG_2944|M.smegmatis_MC2_155 -------------------------MIASVRGEVIDIALDHAVIEAAGVG Rv2593c|M.tuberculosis_H37Rv -------------------------MIASVRGEVLEVALDHVVIEAAGVG Mb2624c|M.bovis_AF2122/97 -------------------------MIASVRGEVLEVALDHVVIEAAGVG MMAR_2110|M.marinum_M -------------------------MISSLRGEVLEVALDHVVIEAAGVG MUL_1715|M.ulcerans_Agy99 -------------------------MISSLRGEVLEVALDHVVIEAAGVG MLBr_00482|M.leprae_Br4923 -------------------------MIFSVRGEVLEVALDHAVIEAAGIG MAV_3474|M.avium_104 -------------------------MIASVRGEVLEVALDHAVIEAAGVG MAB_2883c|M.abscessus_ATCC_199 -------------------------MIASVNGEVIDIALDHVVIEAAGVG TH_1491|M.thermoresistible__bu VANRRALVLAGGGLAGIAWETGVLLGIADESPHTADLLLTSDVLVGTSAG * .. :: * *: .:. * Mflv_3825|M.gilvum_PYR-GCK YKVMATP------------------------------------------A Mvan_2574|M.vanbaalenii_PYR-1 YKVMATP------------------------------------------A MSMEG_2944|M.smegmatis_MC2_155 YKVMATP------------------------------------------S Rv2593c|M.tuberculosis_H37Rv YRVNATP------------------------------------------A Mb2624c|M.bovis_AF2122/97 YRVNATP------------------------------------------A MMAR_2110|M.marinum_M YRVNATP------------------------------------------S MUL_1715|M.ulcerans_Agy99 YRVNATP------------------------------------------S MLBr_00482|M.leprae_Br4923 YRVNATP------------------------------------------S MAV_3474|M.avium_104 YRVNATP------------------------------------------S MAB_2883c|M.abscessus_ATCC_199 YRVNATP------------------------------------------A TH_1491|M.thermoresistible__bu SAVAAQLGSGAPLTRLFERQLDPNTAEIKPRVAIDDLTAEFLEAVRRPGS * * : Mflv_3825|M.gilvum_PYR-GCK TLATLRRGSEARLITAMIVREDS-------QTLYGFADSDAR-------- Mvan_2574|M.vanbaalenii_PYR-1 TLATLRRGAEARLITAMIVREDS-------MTLYGFADSDAR-------- MSMEG_2944|M.smegmatis_MC2_155 TLATLRRGTEARLITAMIVREDS-------MTLYGFVDGDAR-------- Rv2593c|M.tuberculosis_H37Rv TLATLRQGTEARLITAMIVREDS-------MTLYGFPDGETR-------- Mb2624c|M.bovis_AF2122/97 TLATLRQGTEARLITAMIVREDS-------MTLYGFPDGETR-------- MMAR_2110|M.marinum_M TLATLRQGTDARLITAMIVREDS-------MTLYGFVDGETR-------- MUL_1715|M.ulcerans_Agy99 TLATLRQGTDARLITAMIVREDS-------MTLYGFVDGETR-------- MLBr_00482|M.leprae_Br4923 ALATLRQGSQARLVTAMVVREDS-------MTLYGFSDAENR-------- MAV_3474|M.avium_104 TLSTLRTGTQARLITAMIVREDS-------MTLYGFTDAETR-------- MAB_2883c|M.abscessus_ATCC_199 TLSTLRRGTQIRLITAMIVREDS-------MTLYGFTDTDAR-------- TH_1491|M.thermoresistible__bu TVEKLRRIGAVALSTGTVGEAERRAVIAARLPAHDWPDRDLRLSAVDVGT :: .** * *. : . : . :.: * : * Mflv_3825|M.gilvum_PYR-GCK ---------------DLFLTLLGVSGIGPSIALGALAMYD---GPTLRQA Mvan_2574|M.vanbaalenii_PYR-1 ---------------NLFLTLLGVSGIGPSIALGALAMYD---GPTLRQA MSMEG_2944|M.smegmatis_MC2_155 ---------------DLFLTLLGVSGVGPKIALATLAVYD---PQALRQA Rv2593c|M.tuberculosis_H37Rv ---------------DLFLTLLSVSGVGPRLAMAALAVHD---APALRQV Mb2624c|M.bovis_AF2122/97 ---------------DLFLTLLSVSGVGPRLAMAALAVHD---APALRQV MMAR_2110|M.marinum_M ---------------DLFLTLLSVSGVGPRLAMATLSVHD---ANGLRQA MUL_1715|M.ulcerans_Agy99 ---------------DLFLTLLSVSGVGPRLAMATLSVHD---ANGLRQA MLBr_00482|M.leprae_Br4923 ---------------DLFLALLSVSGVGPRLAMATLAVHD---AAALRQA MAV_3474|M.avium_104 ---------------DLFLTLLSVSGVGPRLAMATLAVHD---AGALRQA MAB_2883c|M.abscessus_ATCC_199 ---------------DLFTTLLGVSGVGPKIAMATLAVYD---APTLRQA TH_1491|M.thermoresistible__bu GELVCFDRDSGVPLVDAVAASCAVPGVWPPVTIGERRYMDGGVASTVNMA : . : .*.*: * :::. * :. . Mflv_3825|M.gilvum_PYR-GCK IGDGDLTALTRIPK-------VGKKTAELLALTLRDKVGSSTSSGVAA-- Mvan_2574|M.vanbaalenii_PYR-1 IGDGDVTALTRIPK-------VGKKTAELLVLTLRDKVGTSTSAGVAS-- MSMEG_2944|M.smegmatis_MC2_155 LADGDVTALTRVPG-------IGKRGAERMVLELRDKIGPVSAGGGAA-- Rv2593c|M.tuberculosis_H37Rv LADGNVAALTRVPG-------IGKRGAERMVLELRDKVGVAATGGALS-- Mb2624c|M.bovis_AF2122/97 LADGNVAALTRVPG-------IGKRGAERMVLELRDKVGVAATGGALS-- MMAR_2110|M.marinum_M LADGDVTALTRVPG-------IGKRGAERMVVELRDKVGPAGSAATAP-- MUL_1715|M.ulcerans_Agy99 LADGDVTALTRVPG-------IGKRGAERMVVELRDKVGPAGSAATAP-- MLBr_00482|M.leprae_Br4923 LADSDVASLTRVPG-------IGKRGAERIVLELRDKVGPVGASGLTVGT MAV_3474|M.avium_104 LHDGDVAALTRVPG-------IGKRGAERMVLELRDKIGAAGAAGAPAGA MAB_2883c|M.abscessus_ATCC_199 LADGDVAALTRVPG-------IGKRGAERLVLELREKVAAAPGGTTELG- TH_1491|M.thermoresistible__bu LAADCDTVVALVPSRRDTPSPFGPGPAREIDEFGGAAVGVFADDASVAAF : . : :: :* .* *. : :. Mflv_3825|M.gilvum_PYR-GCK ---AGGHGIRGPVVEALVGLGFAVKQAEEATDKVLANDP----EATTSSA Mvan_2574|M.vanbaalenii_PYR-1 ---AGGHGIRGPVVEALVGLGFAQKQAEEATDKVLANEP----EATTSSA MSMEG_2944|M.smegmatis_MC2_155 ---VGGHAIRGPVVEALVGLGFAAKQAEEATDKVLANDP----EATTSSA Rv2593c|M.tuberculosis_H37Rv ---TNGHAVRSPVVEALVGLGFAAKQAEEATDTVLAANH----DATTSSA Mb2624c|M.bovis_AF2122/97 ---TNGHAVRSPVVEALVGLGFAAKQAEEATDTVLAANH----DATTSSA MMAR_2110|M.marinum_M A--VNGHTVRAPVVEALVGLGFAAKQAEEATDKVLAGDG----EATTSSA MUL_1715|M.ulcerans_Agy99 A--VNGHTVRAPVVEALVGLGFAAKQAEEATDKVLAGDG----EATTSSA MLBr_00482|M.leprae_Br4923 A--ADGNAVRGSVVEALVGLGFAAKQAEEATDQVLDGELGKDGAVATSSA MAV_3474|M.avium_104 A--RNGHAVRGPVVEALVGLGFAAKQAEEATDKVLAAEP----EAGTSGA MAB_2883c|M.abscessus_ATCC_199 R--GTASLVRSQVVEALIGLGFAAKQAEQATDTVLAQDNPGDTGADVSGV TH_1491|M.thermoresistible__bu GXXXGGHAVRGPVVEALVGLGFSAKQAEEATDKVLADDP----DASTSTA . :*. *****:****: ****:*** ** : . .* . Mflv_3825|M.gilvum_PYR-GCK LRAALSMLGKK- Mvan_2574|M.vanbaalenii_PYR-1 LRAALSMLGKK- MSMEG_2944|M.smegmatis_MC2_155 LRAALSMLGKK- Rv2593c|M.tuberculosis_H37Rv LRSALSLLGKAR Mb2624c|M.bovis_AF2122/97 LRSALSLLGKAR MMAR_2110|M.marinum_M LRAALSLLGKAR MUL_1715|M.ulcerans_Agy99 LRAALSLLGKAR MLBr_00482|M.leprae_Br4923 LRAALSLLGKTR MAV_3474|M.avium_104 LRAALSLLGKSR MAB_2883c|M.abscessus_ATCC_199 LRSALALLGKTR TH_1491|M.thermoresistible__bu LRSALSMLGRK- **:**::**: