For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MPIPAPSPDARAVVTGASQNIGAALATELAARGHHLIVTARREDVLTELAARLADKYRVTVDVRPADLAD PQERSKLADELAARPISILCANAGTATFGPIASLDLAGEKTQVQLNAVAVHDLTLAVLPGMIERKAGGIL ISGSAAGNSPIPYNATYAATKAFVNTFSESLRGELRGSGVHVTVLAPGPVRTELPDASEASLVEKLVPDF LWISTEHTARVSLNALERNKMRVVPGLTSKAMSVASQYAPRAIVAPIVGAFYKRLGGS
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv2509 | - | - | 100% (268) | PROBABLE SHORT-CHAIN TYPE DEHYDROGENASE/REDUCTASE |
M. tuberculosis H37Rv | Rv1544 | - | 3e-52 | 43.07% (267) | ketoacyl reductase |
M. tuberculosis H37Rv | Rv0765c | - | 2e-23 | 33.94% (221) | short chain dehydrogenase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2537 | - | 1e-147 | 100.00% (268) | putative short-chain type dehydrogenase/reductase |
M. gilvum PYR-GCK | Mflv_2545 | - | 1e-113 | 76.40% (267) | short-chain dehydrogenase/reductase SDR |
M. leprae Br4923 | MLBr_00429 | - | 1e-131 | 88.76% (267) | putative oxidoreductase |
M. abscessus ATCC 19977 | MAB_1537c | - | 1e-114 | 78.20% (266) | putative short chain dehydrogenase/reductase |
M. marinum M | MMAR_3856 | - | 1e-136 | 91.76% (267) | short-chain type dehydrogenase/reductase |
M. avium 104 | MAV_1666 | - | 1e-131 | 87.27% (267) | short-chain dehydrogenase |
M. smegmatis MC2 155 | MSMEG_4722 | - | 1e-117 | 79.03% (267) | short-chain dehydrogenase |
M. thermoresistible (build 8) | TH_1383 | - | 1e-118 | 79.40% (267) | PROBABLE SHORT-CHAIN TYPE DEHYDROGENASE/REDUCTASE |
M. ulcerans Agy99 | MUL_3788 | - | 1e-135 | 91.01% (267) | short-chain type dehydrogenase/reductase |
M. vanbaalenii PYR-1 | Mvan_4098 | - | 1e-114 | 76.78% (267) | short-chain dehydrogenase/reductase SDR |
CLUSTAL 2.0.9 multiple sequence alignment Rv2509|M.tuberculosis_H37Rv MPIPAPSPDARAVVTGASQNIGAALATELAARGHHLIVTARREDVLTELA Mb2537|M.bovis_AF2122/97 MPIPAPSPDARAVVTGASQNIGAALATELAARGHHLIVTARREDVLTELA MLBr_00429|M.leprae_Br4923 MPIPAPSPEARAVVTGASQNIGEALATELAAHGHSLIVIARREDVLVDLA MMAR_3856|M.marinum_M MPIPAPSPDARAVVTGASQNIGEALATELAARGHNLIVTARRESLLNELA MUL_3788|M.ulcerans_Agy99 MPIPAPSPDARAVVTGASQNIGEALATELAARGHNLIVTARRESLLNELA MAV_1666|M.avium_104 MPIPAPSPEARAVVTGASQNIGEALATELAARGHHLIVTARREDLLKDLA MAB_1537c|M.abscessus_ATCC_199 MPIPAPSPDARAVVTGASQGIGAALAEELAARGHNLIITARRGEILNDLA Mflv_2545|M.gilvum_PYR-GCK MPVPAPSADARAVVTGASQNIGEALAVELARRGHHLIITARREEVLNALA Mvan_4098|M.vanbaalenii_PYR-1 MPVPAPSEDARAVVTGASQNIGEALAVELAERGHHLIITARREEVLNALA MSMEG_4722|M.smegmatis_MC2_155 MPVPAPSPDARAVVTGASQNIGEALATELAARGHHLIITARREEVLTSLA TH_1383|M.thermoresistible__bu MPVPEPTPDARAVITGASQNIGAALATELAARGHNLIVTARRAEVLTELA **:* *: :****:*****.** *** *** :** **: *** .:* ** Rv2509|M.tuberculosis_H37Rv ARLADKYRVTVDVRPADLADPQERSKLADELAARPISILCANAGTATFGP Mb2537|M.bovis_AF2122/97 ARLADKYRVTVDVRPADLADPQERSKLADELAARPISILCANAGTATFGP MLBr_00429|M.leprae_Br4923 ARLADKYRVAVEVRPADLTDPSERVKLADELTVRPISILCANAGTATFGP MMAR_3856|M.marinum_M ARLTDKYRVTVEVRPADLADPQERTKLTDELAARPISILCANAGTATFGP MUL_3788|M.ulcerans_Agy99 ARLTDKYRVSVEVRPADLADPQERTKLTDELAARPISILCANAGTATFGP MAV_1666|M.avium_104 ARLTEKYRVTVEVRPADLADAGERATLCDELAARPISVLCANAGTATFGP MAB_1537c|M.abscessus_ATCC_199 NALSEKTGVIVEVRAVDLADPGARDALCTELSERNISILCNNAGTATFGP Mflv_2545|M.gilvum_PYR-GCK DRLRSEFGVTVEVRAVDLADPAARDVFCEELATRTISILCANAGTATFGA Mvan_4098|M.vanbaalenii_PYR-1 ERLRQKYGVTVEVRAVDLADPVSRGAFCDELAGRNISILCANAGTATFGA MSMEG_4722|M.smegmatis_MC2_155 QRLTERYGVTVEVRAVDLTDPAARATLCDELAEREISILCANAGTATFGA TH_1383|M.thermoresistible__bu DRLTDRHGVTVEVRPLDLADPEQRGTLCAELAEREISILCANAGVATFGP * .. * *:**. **:*. * : **: * **:** ***.****. Rv2509|M.tuberculosis_H37Rv IASLDLAGEKTQVQLNAVAVHDLTLAVLPGMIERKAGGILISGSAAGNSP Mb2537|M.bovis_AF2122/97 IASLDLAGEKTQVQLNAVAVHDLTLAVLPGMIERKAGGILISGSAAGNSP MLBr_00429|M.leprae_Br4923 VSALDPAGEKAQVQLNAVAVHDLTLAVLPGMIERKAGGILISGSAAGNSP MMAR_3856|M.marinum_M VASLDPAGEKAQVQLNAVAVHDLTLAVLPGMIERRAGGILISGSAAGNSP MUL_3788|M.ulcerans_Agy99 VASLDPAGEKAQVQLNAVAVHDLTLAVLPGMIERRAGGILISGSAAGNSP MAV_1666|M.avium_104 VATLDPAGEKAQVQLNVLGVHDLTLAVLPGMVERRAGGILISGSAAGNSP MAB_1537c|M.abscessus_ATCC_199 IRGLDPAGERKQVQLNAVAVHDLTLAVLPGMLARGAGGILISGSAAGNSP Mflv_2545|M.gilvum_PYR-GCK VASLDPADERKQVQLNVLGVHDLVLAVLPGMVARRAGGILISGSAAGNSP Mvan_4098|M.vanbaalenii_PYR-1 VHALDPAEERKQVQLNVLGVHDLVLAVLPGMVQRRAGGILISGSAAGNSP MSMEG_4722|M.smegmatis_MC2_155 VKDLDPAGEKAQVQLNVLGVHDLVLAVLPGMVARRAGGILISGSAAGNSP TH_1383|M.thermoresistible__bu VHKLDPAEEKAQVQLNVLGVHDLVLAVLPGMVQRRAGGILISGSAAGNSP : ** * *: *****.:.****.*******: * *************** Rv2509|M.tuberculosis_H37Rv IPYNATYAATKAFVNTFSESLRGELRGSGVHVTVLAPGPVRTELPDASEA Mb2537|M.bovis_AF2122/97 IPYNATYAATKAFVNTFSESLRGELRGSGVHVTVLAPGPVRTELPDASEA MLBr_00429|M.leprae_Br4923 IPYNATYAATKAFANTFSESLRGELHGSGVHVTLLAPGPVRTELPDHDEA MMAR_3856|M.marinum_M IPYNATYAATKAFANTFSESLRGELRGSGVHVTLLAPGPVRTDLPDASEA MUL_3788|M.ulcerans_Agy99 IPYNATYAATKAFANTFSESLRGELRGSGVHVTLLAPGPVRTDLPDASEA MAV_1666|M.avium_104 IPYNATYAATKAFVNTFSESLRGELRGSGVHVTLLAPGPVRTDLPDDAEA MAB_1537c|M.abscessus_ATCC_199 IPNNATYAATKAFANTFSESLRGELKGTGVHVTLLAPGPVRTVEPDPAEA Mflv_2545|M.gilvum_PYR-GCK IPNNATYAATKAFANTFGESLRGEVKSTGVHVTVLAPGPVRTELPDPDEQ Mvan_4098|M.vanbaalenii_PYR-1 IPNNATYAATKAFANTFGESLRGEVKSAGVHVTVLAPGPVRTELPDPDEQ MSMEG_4722|M.smegmatis_MC2_155 IPNNATYAASKAFANTFSESLRGELTGVGVHVTLLAPGPVRTELPDPSEQ TH_1383|M.thermoresistible__bu IPNNATYAATKAFANTFSESLRGELKDLGVHVTLLAPGPVRSDLPDPSEA ** ******:***.***.******: . *****:*******: ** * Rv2509|M.tuberculosis_H37Rv SLVEKLVPDFLWISTEHTARVSLNALERNKMRVVPGLTSKAMSVASQYAP Mb2537|M.bovis_AF2122/97 SLVEKLVPDFLWISTEHTARVSLNALERNKMRVVPGLTSKAMSVASQYAP MLBr_00429|M.leprae_Br4923 SLVEKLVPDFLWISTEHTARLSLDALERNKMRVVPGLTSKAMSVASRYAP MMAR_3856|M.marinum_M SLVERLVPDFLWISTEHTAQVSLDALARNKMRVVPGLTSKAMSVASQYAP MUL_3788|M.ulcerans_Agy99 SLVERLVPDFLWISTEHTAQVSLDALARNKMRVVAGLTSKAMSVASQYAP MAV_1666|M.avium_104 SIVERLVPDFLWISTEHTARVSLDALGRNKMRVVPGLTSKAMSVASGYAP MAB_1537c|M.abscessus_ATCC_199 SIVDKVVPDFLWINGEYTARVSLNALERNKMRVVPGITSKAMSVAAGYAP Mflv_2545|M.gilvum_PYR-GCK SLVERLIPDFLWIDTEYTAKVSLDGLDRNKMRVVPGVTSKAMSAASGYAP Mvan_4098|M.vanbaalenii_PYR-1 SLVERLIPDFLWIDTEYTAKVSLDGLDRNKMRVVPGITSKAMSAASGYAP MSMEG_4722|M.smegmatis_MC2_155 SLVERLIPDFLWIDTEYTAKLSLDGLEHNKMRVVPGVTSKAMSVASGYAP TH_1383|M.thermoresistible__bu SLVDRLVPDFLWISTEHTAKLSLDGLAANKMRVVPGLTSKAMSVASGYAP *:*::::******. *:**::**:.* ******.*:******.*: *** Rv2509|M.tuberculosis_H37Rv RAIVAPIVGAFYKRLGGS Mb2537|M.bovis_AF2122/97 RAIVAPIVGAFYKRLGGS MLBr_00429|M.leprae_Br4923 RAIVASIVGNFYKKLGGG MMAR_3856|M.marinum_M RAIVAPIVGGFYKKLGGG MUL_3788|M.ulcerans_Agy99 RAIVAPIVGGFYKKLGGG MAV_1666|M.avium_104 RAIVAPIVGSFYKKLGGG MAB_1537c|M.abscessus_ATCC_199 RAVVAPIVGSFYKKLGD- Mflv_2545|M.gilvum_PYR-GCK RAIVAPIVGAVYKKLGGD Mvan_4098|M.vanbaalenii_PYR-1 RAIVAPIVGAVYKKLGGD MSMEG_4722|M.smegmatis_MC2_155 RAIVTPIVGAVYKKLGGG TH_1383|M.thermoresistible__bu RAIVAPIVGAFYKKLGGG **:*:.*** .**:**.