For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
LWAVVGQRFVPGISDALASYTFGAFGVPLWQMVVGSFIGSAPRVFVYTALGASITNLSSPLVYSAIAVWC VTAIIGAFAARRWYRKWRARPRRRCGLAQLTTGSQQRHTSHRTPAGVVMPGSLSEHRRLRQEAPDRIEHH PPIE
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv2306B | - | - | 100% (144) | POSSIBLE CONSERVED MEMBRANE PROTEIN |
M. tuberculosis H37Rv | Rv0625c | - | 1e-36 | 77.17% (92) | transmembrane protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2329 | - | 1e-82 | 100.00% (144) | hypothetical protein Mb2329 |
M. gilvum PYR-GCK | Mflv_5151 | - | 6e-37 | 73.33% (90) | hypothetical protein Mflv_5151 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_3541 | - | 3e-40 | 83.33% (90) | hypothetical protein MMAR_3541 |
M. avium 104 | MAV_4545 | - | 2e-40 | 80.43% (92) | hypothetical protein MAV_4545 |
M. smegmatis MC2 155 | MSMEG_2840 | - | 6e-42 | 87.78% (90) | hypothetical protein MSMEG_2840 |
M. thermoresistible (build 8) | TH_2317 | - | 8e-40 | 76.60% (94) | POSSIBLE CONSERVED MEMBRANE PROTEIN |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_1181 | - | 5e-35 | 67.78% (90) | hypothetical protein Mvan_1181 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_5151|M.gilvum_PYR-GCK ---MTDPTDAPETSKRRALVRLALVVAVLAVLFYLTAIARVIDVEAVRDL Mvan_1181|M.vanbaalenii_PYR-1 -MRMEDTEGTPETSRRRHITRLALFGAVLAVLYYLTAVERVIDVAQVRGL MAV_4545|M.avium_104 -MDNQEAPDAPAS-RRAHILRLAVFAGFLAVVFYLVAVARVIDVGEIRAV TH_2317|M.thermoresistible__bu ---MTEPS--PPASRWPHILRLAAFAGFLFTLFYLVAVVRVIDVDGVRGA MMAR_3541|M.marinum_M MTDTATDPAPPSASRGRHLVRLALFAGFLLGMFYLVAVARVIDIAGIRSA MSMEG_2840|M.smegmatis_MC2_155 ---MTDTDDPPATGRTRHIIRLALFAAFLLGLFYLVAVARVVEIGDIRGA Rv2306B|M.tuberculosis_H37Rv -------------------------------------------------- Mb2329|M.bovis_AF2122/97 -------------------------------------------------- Mflv_5151|M.gilvum_PYR-GCK IESTGPLAPLTYVGVSAVLGALLVPGPLLAAGSGFLFGPVVGTVVTLGAT Mvan_1181|M.vanbaalenii_PYR-1 IESTGPAAPLTYVAVSAVLGALLVPGPLLAAGSGFLFGPLVGTFVTLGAT MAV_4545|M.avium_104 VSATGPAAPLTYVVASALAGALFVPGSILAAGSGLLFGPLLGVFVTLGAT TH_2317|M.thermoresistible__bu IAAAGPVAPLVYVVVSAVLGAVFVPGPILAAGSGLLFGPLLGTFVTLGAT MMAR_3541|M.marinum_M ITATGPLAPLAYVVMSTVLGAVFVPGPILAAGSGVLFGPILGTFVTLGAT MSMEG_2840|M.smegmatis_MC2_155 VSATGPIAPLVYVVVSACLGALFVPGPLLAGTSGFLFGPVLGTFVTLGAT Rv2306B|M.tuberculosis_H37Rv -------------------------------------------------- Mb2329|M.bovis_AF2122/97 -------------------------------------------------- Mflv_5151|M.gilvum_PYR-GCK VVNALISAYLGRRAGRQSARTLLGASRAEQVDRLIERGGLWAVVGQRFVP Mvan_1181|M.vanbaalenii_PYR-1 MGSAVISAFAGRRAGRDSARGLLGADRAERIDGLIQRGGLWAVVGQRWIP MAV_4545|M.avium_104 VGTATAASFVGRRAGRDSARALLGPARADRVDALIGRGGLWAVVGQRFVP TH_2317|M.thermoresistible__bu VGTATVSCLLGRRAGRSSARALLGTDRADRLDALIDRRGLWAVVGQRFIP MMAR_3541|M.marinum_M VGTAVVASLLGRRAGRDSARVLLGTDRANRLDARIERQGLWAVVGQRFIP MSMEG_2840|M.smegmatis_MC2_155 VGTATVASLIGRRAGRESARGVLGAERADRLDRQIERGGLWAVVGQRFVP Rv2306B|M.tuberculosis_H37Rv ---------------------------------------MWAVVGQRFVP Mb2329|M.bovis_AF2122/97 ---------------------------------------MWAVVGQRFVP :*******::* Mflv_5151|M.gilvum_PYR-GCK GISDSLASYAFGAFGVPLWQMAAGAFIGSMPRAFVYTVVGSSVGEFSAPL Mvan_1181|M.vanbaalenii_PYR-1 GINDALASYTFGAFGVPLWQMAAGALIGSAPKAFVYTAVGSTLGEFSAPL MAV_4545|M.avium_104 GISDALASYAFGAFGVPLWQMAVGAFIGSAPRAFAYTALGASIGNRSSLL TH_2317|M.thermoresistible__bu GVSDAMASYAFGAFGVPLWQMAVGAFIGSAPRAFVYTALGASIGDLSAPL MMAR_3541|M.marinum_M GISDALASYTFGAFGVPLWQMILGSLIGSAPRAFVYTALGATIMNLSSWL MSMEG_2840|M.smegmatis_MC2_155 GISDALASYAFGAFGVPLWQMVVGSFIGSAPRAFVYTALGASIGDLSAPL Rv2306B|M.tuberculosis_H37Rv GISDALASYTFGAFGVPLWQMVVGSFIGSAPRVFVYTALGASITNLSSPL Mb2329|M.bovis_AF2122/97 GISDALASYTFGAFGVPLWQMVVGSFIGSAPRVFVYTALGASITNLSSPL *:.*::***:*********** *::*** *:.*.**.:*::: : *: * Mflv_5151|M.gilvum_PYR-GCK AFAAAAVWCVTAVIGAFAAHRGWRRWRA--RQ------------------ Mvan_1181|M.vanbaalenii_PYR-1 LAAAVVVWCVTAVVGAFAAHRGWRAWRS--RE------------------ MAV_4545|M.avium_104 AYAAVAVWCVSAIVGAFAAHRGYRQWRG--RPKDEAR------------- TH_2317|M.thermoresistible__bu AYTAIAVWCVIAIVGAFAARQGFRSWQATARPRDVRP------------- MMAR_3541|M.marinum_M AYAAIAVWCVTAIVGAVTARREYRKWRERASDPAPAESA----------- MSMEG_2840|M.smegmatis_MC2_155 AYTAIAVWCVTAIIGAFAAHRGYRSWRG--RHQDPAS------------- Rv2306B|M.tuberculosis_H37Rv VYSAIAVWCVTAIIGAFAARRWYRKWRARPRRRCGLAQLTTGSQQRHTSH Mb2329|M.bovis_AF2122/97 VYSAIAVWCVTAIIGAFAARRWYRKWRARPRRRCGLAQLTTGSQQRHTSH :* .**** *::**.:*:: :* *: Mflv_5151|M.gilvum_PYR-GCK --------------------------------- Mvan_1181|M.vanbaalenii_PYR-1 --------------------------------- MAV_4545|M.avium_104 --------------------------------- TH_2317|M.thermoresistible__bu --------------------------------- MMAR_3541|M.marinum_M --------------------------------- MSMEG_2840|M.smegmatis_MC2_155 --------------------------------- Rv2306B|M.tuberculosis_H37Rv RTPAGVVMPGSLSEHRRLRQEAPDRIEHHPPIE Mb2329|M.bovis_AF2122/97 RTPAGVVMPGSLSEHRRLRQEAPDRIEHHPPIE