For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTDTATDPAPPSASRGRHLVRLALFAGFLLGMFYLVAVARVIDIAGIRSAITATGPLAPLAYVVMSTVLG AVFVPGPILAAGSGVLFGPILGTFVTLGATVGTAVVASLLGRRAGRDSARVLLGTDRANRLDARIERQGL WAVVGQRFIPGISDALASYTFGAFGVPLWQMILGSLIGSAPRAFVYTALGATIMNLSSWLAYAAIAVWCV TAIVGAVTARREYRKWRERASDPAPAESA
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. marinum M | MMAR_3541 | - | - | 100% (239) | hypothetical protein MMAR_3541 |
| M. marinum M | MMAR_2301 | - | 2e-17 | 28.87% (239) | hypothetical protein MMAR_2301 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0641c | - | 7e-89 | 71.81% (227) | transmembrane protein |
| M. gilvum PYR-GCK | Mflv_5151 | - | 6e-79 | 63.56% (225) | hypothetical protein Mflv_5151 |
| M. tuberculosis H37Rv | Rv0625c | - | 7e-89 | 71.81% (227) | transmembrane protein |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_2713 | - | 3e-11 | 24.58% (179) | hypothetical protein MAB_2713 |
| M. avium 104 | MAV_4545 | - | 5e-89 | 71.12% (232) | hypothetical protein MAV_4545 |
| M. smegmatis MC2 155 | MSMEG_2840 | - | 5e-96 | 73.50% (234) | hypothetical protein MSMEG_2840 |
| M. thermoresistible (build 8) | TH_2317 | - | 9e-94 | 75.11% (225) | POSSIBLE CONSERVED MEMBRANE PROTEIN |
| M. ulcerans Agy99 | MUL_1504 | - | 1e-17 | 28.87% (239) | hypothetical protein MUL_1504 |
| M. vanbaalenii PYR-1 | Mvan_1181 | - | 2e-82 | 66.67% (219) | hypothetical protein Mvan_1181 |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_5151|M.gilvum_PYR-GCK ---------------MTDPTDAPETSKRRALVRLALVVAVLAVLFYLTAI
Mvan_1181|M.vanbaalenii_PYR-1 -------------MRMEDTEGTPETSRRRHITRLALFGAVLAVLYYLTAV
Mb0641c|M.bovis_AF2122/97 -------------MSTHND-SAPTS-RRRHIVRLVVFAGFLVGMFYLVAA
Rv0625c|M.tuberculosis_H37Rv -------------MSTHND-SAPTS-RRRHIVRLVVFAGFLVGMFYLVAA
MAV_4545|M.avium_104 -------------MDNQEAPDAPAS-RRAHILRLAVFAGFLAVVFYLVAV
TH_2317|M.thermoresistible__bu ----------------MTEPSPPAS-RWPHILRLAAFAGFLFTLFYLVAV
MMAR_3541|M.marinum_M ------------MTDTATDPAPPSASRGRHLVRLALFAGFLLGMFYLVAV
MSMEG_2840|M.smegmatis_MC2_155 ------------MTDTD---DPPATGRTRHIIRLALFAAFLLGLFYLVAV
MAB_2713|M.abscessus_ATCC_1997 ------------MGFRQIGRTAVATLRRLPRRQLLWTGAALLIVIAAVRF
MUL_1504|M.ulcerans_Agy99 MIVTASVLCKTTDTVRGIALALRTAARQMSRLRKVSTVAGITLLVAVALL
: : : . : : .
Mflv_5151|M.gilvum_PYR-GCK ARVIDVEAVRDLIESTGPLAPLTYVGVSAVLGALLVPGPLLAAGSGFLFG
Mvan_1181|M.vanbaalenii_PYR-1 ERVIDVAQVRGLIESTGPAAPLTYVAVSAVLGALLVPGPLLAAGSGFLFG
Mb0641c|M.bovis_AF2122/97 TDVIDVAAVRGAVSATGPAAPLTYVVVSAVLGALFVPGPILAASSGLLFG
Rv0625c|M.tuberculosis_H37Rv TDVIDVAAVRGAVSATGPAAPLTYVVVSAVLGALFVPGPILAASSGLLFG
MAV_4545|M.avium_104 ARVIDVGEIRAVVSATGPAAPLTYVVASALAGALFVPGSILAAGSGLLFG
TH_2317|M.thermoresistible__bu VRVIDVDGVRGAIAAAGPVAPLVYVVVSAVLGAVFVPGPILAAGSGLLFG
MMAR_3541|M.marinum_M ARVIDIAGIRSAITATGPLAPLAYVVMSTVLGAVFVPGPILAAGSGVLFG
MSMEG_2840|M.smegmatis_MC2_155 ARVVEIGDIRGAVSATGPIAPLVYVVVSACLGALFVPGPLLAGTSGFLFG
MAB_2713|M.abscessus_ATCC_1997 VPLPTALQMRDWARDLGPWFPLAFLGAHTIVTVLPFPRTAFTLAAGLLFG
MUL_1504|M.ulcerans_Agy99 VPLPTAVQMRDWASSVGPWLPLVFLLVHIVVTVPPFPRTAFTVAGGLLFG
: :* ** **.:: . .* . :: .*.***
Mflv_5151|M.gilvum_PYR-GCK PVVGTVVTLGATVVNALISAYLGRRAGRQSARTLLGASRAEQVDRLIERG
Mvan_1181|M.vanbaalenii_PYR-1 PLVGTFVTLGATMGSAVISAFAGRRAGRDSARGLLGADRAERIDGLIQRG
Mb0641c|M.bovis_AF2122/97 PLVGVFVTLGATVGTAVVASLVGRRAGRASARALLGGERADRTDALIERC
Rv0625c|M.tuberculosis_H37Rv PLVGVFVTLGATVGTAVVASLVGRRAGRASARALLGGERADRTDALIERC
MAV_4545|M.avium_104 PLLGVFVTLGATVGTATAASFVGRRAGRDSARALLGPARADRVDALIGRG
TH_2317|M.thermoresistible__bu PLLGTFVTLGATVGTATVSCLLGRRAGRSSARALLGTDRADRLDALIDRR
MMAR_3541|M.marinum_M PILGTFVTLGATVGTAVVASLLGRRAGRDSARVLLGTDRANRLDARIERQ
MSMEG_2840|M.smegmatis_MC2_155 PVLGTFVTLGATVGTATVASLIGRRAGRESARGVLGAERADRLDRQIERG
MAB_2713|M.abscessus_ATCC_1997 TQLGVLLAVVASTASAVLALWAVRALGWKLS-ALHHRPAVKSVDDQLRRR
MUL_1504|M.ulcerans_Agy99 PVLGIVIAVTASTASAVIALLLVRAAGWRLN-RLVPHGAVDRLDERLRER
. :* .::: *: .* : * * : .. * : .
Mflv_5151|M.gilvum_PYR-GCK GLWAVVGQRFVPGISDSLASYAFGAFGVPLWQMAAGAFIGSMPRAFVYTV
Mvan_1181|M.vanbaalenii_PYR-1 GLWAVVGQRWIPGINDALASYTFGAFGVPLWQMAAGALIGSAPKAFVYTA
Mb0641c|M.bovis_AF2122/97 GLWAVVGQRFVPGISDAFASYAFGTFGVPLWQMAVGAFIGSAPRAFAYTA
Rv0625c|M.tuberculosis_H37Rv GLWAVVGQRFVPGISDAFASYAFGTFGVPLWQMAVGAFIGSAPRAFAYTA
MAV_4545|M.avium_104 GLWAVVGQRFVPGISDALASYAFGAFGVPLWQMAVGAFIGSAPRAFAYTA
TH_2317|M.thermoresistible__bu GLWAVVGQRFIPGVSDAMASYAFGAFGVPLWQMAVGAFIGSAPRAFVYTA
MMAR_3541|M.marinum_M GLWAVVGQRFIPGISDALASYTFGAFGVPLWQMILGSLIGSAPRAFVYTA
MSMEG_2840|M.smegmatis_MC2_155 GLWAVVGQRFVPGISDALASYAFGAFGVPLWQMVVGSFIGSAPRAFVYTA
MAB_2713|M.abscessus_ATCC_1997 GWIAVMSMRLIPAVPFSVLNYAAGASAVRALPYTLATFVGLLPGTLAVVV
MUL_1504|M.ulcerans_Agy99 GWLAILSLRLIPAVPFAALNYGAGASAVRVVPYTLSTLAGLLPGTVAVVI
* *::. * :*.: : .* *: .* .:: * * :.. .
Mflv_5151|M.gilvum_PYR-GCK VGSSVGEFSAPLAFAAAAVWCVTAVIGAFAAHRGWRRWRARQ--------
Mvan_1181|M.vanbaalenii_PYR-1 VGSTLGEFSAPLLAAAVVVWCVTAVVGAFAAHRGWRAWRSRE--------
Mb0641c|M.bovis_AF2122/97 LGAAIGDRSPLLASCAIAVWCVTAIIGAFAARHGYRQWRAHARGDGADGG
Rv0625c|M.tuberculosis_H37Rv LGAAIGDRSPLLASCAIAVWCVTAIIGAFAARHGYRQWRAHARGDGADGG
MAV_4545|M.avium_104 LGASIGNRSSLLAYAAVAVWCVSAIVGAFAAHRGYRQWRGRPKDE-----
TH_2317|M.thermoresistible__bu LGASIGDLSAPLAYTAIAVWCVIAIVGAFAARQGFRSWQATARPRD----
MMAR_3541|M.marinum_M LGATIMNLSSWLAYAAIAVWCVTAIVGAVTARREYRKWRERASDPAPAES
MSMEG_2840|M.smegmatis_MC2_155 LGASIGDLSAPLAYTAIAVWCVTAIIGAFAAHRGYRSWRGRHQDPAS---
MAB_2713|M.abscessus_ATCC_1997 LGDALTGHISPTLFAVSLATSAIGVLGILYEIRRYKRTHTEIP----DPE
MUL_1504|M.ulcerans_Agy99 LGSALAGDGSPLLVLVSVCTAALGMSGLVFEVRQYRRHHRHQAPSDHGPV
:* :: . . .. .: * . : :: :
Mflv_5151|M.gilvum_PYR-GCK ------------
Mvan_1181|M.vanbaalenii_PYR-1 ------------
Mb0641c|M.bovis_AF2122/97 VEDPDREVGAR-
Rv0625c|M.tuberculosis_H37Rv VEDPDREVGAR-
MAV_4545|M.avium_104 ---------AR-
TH_2317|M.thermoresistible__bu ---------VRP
MMAR_3541|M.marinum_M A-----------
MSMEG_2840|M.smegmatis_MC2_155 ------------
MAB_2713|M.abscessus_ATCC_1997 SSGAPERVGR--
MUL_1504|M.ulcerans_Agy99 LEPACEPLGV--