For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTPATATLRRTCR PRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLPRFDCQDRADWLSVKRLAGWLAAA GYCGRAPRPAHRCPARRHR
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv2013 | - | - | 100% (159) | POSSIBLE TRANSPOSASE |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2036 | - | 2e-90 | 100.00% (159) | transposase |
M. gilvum PYR-GCK | Mflv_1197 | - | 1e-14 | 34.75% (141) | transposase, IS111A/IS1328/IS1533 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_3782 | - | 8e-08 | 31.65% (139) | transposase |
M. avium 104 | MAV_0496 | - | 2e-11 | 34.62% (104) | transposase IS116/IS110/IS902 |
M. smegmatis MC2 155 | MSMEG_4081 | - | 3e-13 | 33.33% (141) | transposase IS116/IS110/IS902 |
M. thermoresistible (build 8) | TH_3366 | - | 2e-25 | 46.26% (147) | PUTATIVE transferase |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_5958 | - | 2e-12 | 32.62% (141) | transposase, IS111A/IS1328/IS1533 |
CLUSTAL 2.0.9 multiple sequence alignment Rv2013|M.tuberculosis_H37Rv -------------------------------------------------- Mb2036|M.bovis_AF2122/97 ----------------MSIVDARGREVRRATIEHNAAGLRELLELLSRAG TH_3366|M.thermoresistible__bu ----------------------VGKILAQFMIDHTADGIATLIRKLSKFG Mflv_1197|M.gilvum_PYR-GCK -MTLFIGDDWAEDHHDIHLMDAEGTRLASRRLPEGLAGIRGFHELVAAHA MSMEG_4081|M.smegmatis_MC2_155 --MLFVGDDWAEDHHDLYLMNEAGDRLASRRLPEGLAGIRLLHDLIAAHA Mvan_5958|M.vanbaalenii_PYR-1 --MIFVGDDWAEDHHDVYLMDESGQRLAARRLPEGLSGIRALHELIAGYA MAV_0496|M.avium_104 -------------------MVARG------RVSNDAAGFAALLTLLAEAG MMAR_3782|M.marinum_M MPTVWAGVDTGKRTHHCVVLDRNGGVLLSRPVDNDETALLELIEAVVGVA Rv2013|M.tuberculosis_H37Rv ------------------MDTLLEAGITVVVISPNQLKNLRGRYGSAGNK Mb2036|M.bovis_AF2122/97 -----AREVAIERPDGPVVDTLLEAGITVVVISPNQLKNLRGRYGSAGNK TH_3366|M.thermoresistible__bu D--PADVHIGIERPNGRLVDLLLEAGHPVIPVSPNAIKTWRDGEVISGAK Mflv_1197|M.gilvum_PYR-GCK QDPTE-VVIGIETDRGLWVEALAAAGYEVFAVNPLAVARYRDRHQVSGAK MSMEG_4081|M.smegmatis_MC2_155 DDPAQ-VAVGIETDRGLWVEALTGAGYQVYAVNPLAVARYRDRHAVSGAK Mvan_5958|M.vanbaalenii_PYR-1 EEPDQ-VIVGIETDRGLWVSALAAAGYRVWAINPMAAARYRDRHHVSGAK MAV_0496|M.avium_104 DSAAHPIPVGIETDRGLWVAALRETGRVIYPINPLAASRYRARHAVSGAK MMAR_3782|M.marinum_M AGREVCWATDLNAGGAAMLITLLAAHDQQLLYIPGRIVHHAAATYRGDGK : * : * .. * Rv2013|M.tuberculosis_H37Rv DDRFDAFVLADTLRTDRSRLRPLLPDTPATATLRRTCRPRKDLVAHRVAL Mb2036|M.bovis_AF2122/97 DDRFDAFVLADTLRTDRSRLRPLLPDTPATATLRRTCRPRKDLVAHRVAL TH_3366|M.thermoresistible__bu SDAGDALVIAEYLRLRHHRLRPAAPYSSSTKALRTVVRTRDDVVAMRVAA Mflv_1197|M.gilvum_PYR-GCK SDAADAKLLADLVRTDRHNHRPIAGDTPEVEAIKVLARAHQNLIWSRNRN MSMEG_4081|M.smegmatis_MC2_155 SDAADAKLLADLVRTDRHNHRLIAGDTPDAEAVKVLARAHQNLIWTRNRH Mvan_5958|M.vanbaalenii_PYR-1 SDASDAKLLADLVRTDRHNHREIAGDRPQAEAIKVLARSHQSLIWARTRH MAV_0496|M.avium_104 SDATDAVLLANIVRTDAAAHRPLPADTELAQAIRVLARAQQDAVWARQQI MMAR_3782|M.marinum_M TDAKNARIIADQARMR-TDLQPVRRADPIATDLRLLTSRRTDVVCDRVRA * :* ::*: * : . :: : . : * Rv2013|M.tuberculosis_H37Rv ANQLRAHLRVVFPGVVGLFADLDSP--ISLAFLTFLPRFDCQDRADWLSV Mb2036|M.bovis_AF2122/97 ANQLRAHLRVVFPGVVGLFADLDSP--ISLAFLTFLPRFDCQDRADWLSV TH_3366|M.thermoresistible__bu TNQLSALLDDHWPGAKAIFADVESP--ISLAFLR---RYPTAASAARLGE Mflv_1197|M.gilvum_PYR-GCK TNALRSALREYYPAALEAFASLSD-----RDALAILGRAPTPTDAARLSV MSMEG_4081|M.smegmatis_MC2_155 TNALRSALREYYPAALEAFDDLSD-----RDALAILGHAPDPRQASSLSL Mvan_5958|M.vanbaalenii_PYR-1 ANMLRSGLREYYPAALEAFDSLTD-----SDALAILGRAPTPDQGARLSL MAV_0496|M.avium_104 GNQIRDLLKDFYPAAIAAFAGLPEGGLARADARTILAAAPTPTQAATLTP MMAR_3782|M.marinum_M INRLRQTLLEYFPPLERAFDYSKSK-----AALTLLSRYQTPDSLRRIGP * : * :* * . : Rv2013|M.tuberculosis_H37Rv KRLAGWLAAAGYCGR----------------------------------- Mb2036|M.bovis_AF2122/97 KRLAGWLAAAGYCGR----------------------------------- TH_3366|M.thermoresistible__bu KRLAAFLVKHSYSGRRPVKELLTRLRSAPA-GTTDPVLTIAVRDVVLALV Mflv_1197|M.gilvum_PYR-GCK SKIRSALKAAGRQRNLDAKALEIQTALRSDQLAAAPAVTAAFGATTRAAV MSMEG_4081|M.smegmatis_MC2_155 AKIRSALKAAGRQRNIDIRAQEIQAALRSEQLAAPAAVTAAFAATTRATV Mvan_5958|M.vanbaalenii_PYR-1 AKIGSALKSAGRQRNIESRAAEIQTALRGEHLTAPPAVAAAFGATTAAAV MAV_0496|M.avium_104 ARLRRLLTKAGRRRHLDRDIERLRAVFTDTYLHQPPAVENAMGIQLAALL MMAR_3782|M.marinum_M TRLATWLKARGCRNSATVAQTAVQAAQTQHTTLPTQTVG---AQLVPRLA :: * . Rv2013|M.tuberculosis_H37Rv --------------------------------APR--------------- Mb2036|M.bovis_AF2122/97 --------------------------------APR--------------- TH_3366|M.thermoresistible__bu SVIEALNSAGKALDRSVIARLGEHPDAEVFTSLPRSGQINAAQVLAEWGD Mflv_1197|M.gilvum_PYR-GCK AIITELNHHIADLEAELAAHFETHPDADIYLSLPGLGVILGARVLGEFGD MSMEG_4081|M.smegmatis_MC2_155 GLVVELSRQIDDLENELAAHFETHPDADIYRSLPGLGVILGARVLGEFGD Mvan_5958|M.vanbaalenii_PYR-1 HVITALNDQIAELETALADHFEAHPDADIYRFLPGLGVILGARVLGEFGD MAV_0496|M.avium_104 RQLEAACTAADELAEAAIAHFEQHPDAKIITSFPGLGMLAGARVLAEIGD MMAR_3782|M.marinum_M AEITTIDAELAHVDNEITARFADHDSAEILTSMPGFGPVLAATFLAQIGG * Rv2013|M.tuberculosis_H37Rv ------------------PAHRCPARRHR--------------------- Mb2036|M.bovis_AF2122/97 ------------------PAHRCPARRHR--------------------- TH_3366|M.thermoresistible__bu SRAAYDGPDAVAALAGVTPVTKSSGKQHAVHFR-WACNKRFRRALTTFAD Mflv_1197|M.gilvum_PYR-GCK DPNRYTTAKSRKNYAGTSPLTIASGKKRAVLAR-HVRNRRLYDAIDQWAF MSMEG_4081|M.smegmatis_MC2_155 DPNRYTNAKCRKNYAGTSPLTIASGRKRAVLAR-HIRNRRLYDAIDQWAF Mvan_5958|M.vanbaalenii_PYR-1 DPNRYTTAKCRKNYAGTSPLTIASGRKRAVLAR-HVRNKRLYDALDQWAF MAV_0496|M.avium_104 DRTRFADARGLKAFAGSAPITRASGKKTVVLHR-HIKNRRLAAVGPIWAL MMAR_3782|M.marinum_M NLDGFDTVDRLACVAGLAPVPRDSGRISGNLHRPRRFNRRLLRPCYLAAL * ..: Rv2013|M.tuberculosis_H37Rv -------------------------------------------------- Mb2036|M.bovis_AF2122/97 -------------------------------------------------- TH_3366|M.thermoresistible__bu NSRHQSTWAADIYNRARARGHDHPHAVRILARAWIRVIYRCWHDQSPYDP Mflv_1197|M.gilvum_PYR-GCK CALTNSPGARTFYDQHRAAGDLHHQALRALGNRLVGILHGCLRHHTPYSE MSMEG_4081|M.smegmatis_MC2_155 CALTRSPGARQFYDHRRAEGDLHHQALRALGNRLVGILHGCLRHRTRYDE Mvan_5958|M.vanbaalenii_PYR-1 CTLTRSPGARAYYDQHRAAGDTHHQALRALANRLVGILHGCLRHHSPYDE MAV_0496|M.avium_104 GSLRASPGARRHYDARRAAGDWNHQAQRHLFNKFLGQLHHCLQTGRLYNE MMAR_3782|M.marinum_M SSLKNSPASRTFYDRKRAEGKSHKQALIALARRRINVIWAMLRDHTHYHE Rv2013|M.tuberculosis_H37Rv ------------------------------ Mb2036|M.bovis_AF2122/97 ------------------------------ TH_3366|M.thermoresistible__bu ARHGAVQKLHTAA----------------- Mflv_1197|M.gilvum_PYR-GCK HKAWAHRQTDSRAA---------------- MSMEG_4081|M.smegmatis_MC2_155 HKAWAHRTPAAA------------------ Mvan_5958|M.vanbaalenii_PYR-1 HKAWAHRKPAAA------------------ MAV_0496|M.avium_104 HLAFPLNRPGFDGGSCYWISTSGWSVRFVA MMAR_3782|M.marinum_M PDLVNTPLAA--------------------