For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SDEIARLVADVFELAGLLRRSGEVVAAREGHTQARWQLLSVVSDRALTVPQAARRLGVTRQGVQRVANDL VVCGLAELRHNPDHRTSPLLVLTENGRRVLQAITERAIVVNNRLADAVDPAALQATRDSLRRMIVALKAE RP*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv2011c | - | - | 100% (143) | hypothetical protein Rv2011c |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2034c | - | 3e-75 | 100.00% (143) | hypothetical protein Mb2034c |
M. gilvum PYR-GCK | Mflv_2467 | - | 1e-07 | 27.41% (135) | MarR family transcriptional regulator |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | - | - | - | - | - |
M. avium 104 | MAV_3964 | - | 1e-05 | 27.84% (97) | transcriptional regulator, MarR family protein |
M. smegmatis MC2 155 | MSMEG_0296 | - | 3e-08 | 32.99% (97) | transcriptional regulator, MarR family protein |
M. thermoresistible (build 8) | TH_0263 | - | 1e-07 | 31.96% (97) | transcriptional regulator, MarR family protein |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_4187 | - | 3e-08 | 28.15% (135) | MarR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_2467|M.gilvum_PYR-GCK MDAHDVAGIELTDNILWLLKQAFYFS--LTSVNEAVSEHGVSTAQIGVLR Mvan_4187|M.vanbaalenii_PYR-1 MDARDVTGIELTDNILWLLKQAFYFS--LTTVNEAISEHGVSTAQIGVLR MAV_3964|M.avium_104 --------MELTDNILWLLKQAFYYS--LTTINEAMREHGVSTAQIGVLR MSMEG_0296|M.smegmatis_MC2_155 --------MELTDNTLWWLKQAFYFS--LTAVNDAVKDHGVSTAQIGVLR TH_0263|M.thermoresistible__bu --VADDLAMEFGDNLLWHLKQAWYFS--LTAVNDAVSKHGVSTAQIGVLR Rv2011c|M.tuberculosis_H37Rv ----------MSDEIARLVADVFELAGLLRRSGEVVAAREGHTQARWQLL Mb2034c|M.bovis_AF2122/97 ----------MSDEIARLVADVFELAGLLRRSGEVVAAREGHTQARWQLL : *: : :.: : * .:.: : * * Mflv_2467|M.gilvum_PYR-GCK QLANEPGLSGAELARRLLISPQGVQLALTALERRGLVERKQNPSHGRILQ Mvan_4187|M.vanbaalenii_PYR-1 QLANEPGLSGAELARRLLISPQGVQLALTALERQGLVERKQNPAHGRILQ MAV_3964|M.avium_104 QLANEPGLSGAELARRLLISPQGVQLALTALERRGLVERKRDPQHARILQ MSMEG_0296|M.smegmatis_MC2_155 QLSNEPGLSGAELARRLLITPQGVQLALTALEKRGLVERKQDPQHARILQ TH_0263|M.thermoresistible__bu QLSNEPGLSGAELARRLLITPQGVQLALKSLEQRGLIERRPDPQHARILK Rv2011c|M.tuberculosis_H37Rv SVVSDRALTVPQAARRLGVTRQGVQRVANDLVVCGLAELRHNPDHRTSPL Mb2034c|M.bovis_AF2122/97 SVVSDRALTVPQAARRLGVTRQGVQRVANDLVVCGLAELRHNPDHRTSPL .: .: .*: .: **** :: **** . . * ** * : :* * Mflv_2467|M.gilvum_PYR-GCK AFLTDQGRDVAAAVVQDAIAAHDKVFGVLSKAEQKTLRELLGRVVEQGTG Mvan_4187|M.vanbaalenii_PYR-1 AFLTDKGRKVAAAVLHDAIAAHDRVFGVLSKAEQQTLRELLGRVVEQGTG MAV_3964|M.avium_104 AHLTGEGRKVAETVVNDAIAAHQEVFGVLTEQEQQTLRELLGRVVEKGTG MSMEG_0296|M.smegmatis_MC2_155 VFLTEEGRAVASSVVSDAIAAHDRVFGVLSRDEQEQLRDLLRRVIEQGTG TH_0263|M.thermoresistible__bu VYLTREGRSVAKAVVGDAIAAHEAVFGVLTPEEQRTLRDLLARVVEKGTG Rv2011c|M.tuberculosis_H37Rv LVLTENGRRVLQAITERAIVVNNRLADAVDPAALQATRDSLRRMIVALKA Mb2034c|M.bovis_AF2122/97 LVLTENGRRVLQAITERAIVVNNRLADAVDPAALQATRDSLRRMIVALKA ** :** * :: **..:: : ..: . *: * *:: .. Mflv_2467|M.gilvum_PYR-GCK HELFADHVDT- Mvan_4187|M.vanbaalenii_PYR-1 HELYTDHVDP- MAV_3964|M.avium_104 HELFTDHVDG- MSMEG_0296|M.smegmatis_MC2_155 HTVQADHVDPM TH_0263|M.thermoresistible__bu HTLADDHITD- Rv2011c|M.tuberculosis_H37Rv ERP-------- Mb2034c|M.bovis_AF2122/97 ERP-------- .