For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. smegmatis MC2 155 MSMEG_0296 (-)

annotation: transcriptional regulator, MarR family protein
coordinates: 327192 - 327647
length: 151

ELTDNTLWWLKQAFYFSLTAVNDAVKDHGVSTAQIGVLRQLSNEPGLSGAELARRLLITPQGVQLALTAL
EKRGLVERKQDPQHARILQVFLTEEGRAVASSVVSDAIAAHDRVFGVLSRDEQEQLRDLLRRVIEQGTGH
TVQADHVDPM*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. smegmatis MC2 155MSMEG_0296--100% (151)transcriptional regulator, MarR family protein
M. smegmatis MC2 155MSMEG_0207-6e-1136.45% (107) MarR-family protein transcriptional regulator
M. smegmatis MC2 155MSMEG_2538-3e-1029.31% (116) MarR-family protein transcriptional regulator

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb2911-1e-1235.40% (113) transcriptional regulatory protein
M. gilvum PYR-GCKMflv_2467-6e-6479.19% (149) MarR family transcriptional regulator
M. tuberculosis H37RvRv2887-2e-1235.40% (113) transcriptional regulatory protein
M. leprae Br4923MLBr_02696-9e-0524.35% (115) putative MarR-family regulatory protein
M. abscessus ATCC 19977MAB_2472c-2e-1336.94% (111) MarR family transcriptional regulator
M. marinum MMMAR_1822-4e-1135.45% (110) transcriptional regulatory protein
M. avium 104MAV_3964-5e-6276.51% (149) transcriptional regulator, MarR family protein
M. thermoresistible (build 8)TH_0263-2e-6177.03% (148) transcriptional regulator, MarR family protein
M. ulcerans Agy99MUL_2070-2e-1034.55% (110) transcriptional regulatory protein
M. vanbaalenii PYR-1Mvan_4187-1e-6377.33% (150) MarR family transcriptional regulator

CLUSTAL 2.0.9 multiple sequence alignment


Mb2911|M.bovis_AF2122/97            --------------------------------------------------
Rv2887|M.tuberculosis_H37Rv         --------------------------------------------------
MMAR_1822|M.marinum_M               --------------------------------------------------
MUL_2070|M.ulcerans_Agy99           --------------------------------------------------
MAB_2472c|M.abscessus_ATCC_199      --------------------------------------------------
Mflv_2467|M.gilvum_PYR-GCK          --------------------------------------------------
Mvan_4187|M.vanbaalenii_PYR-1       --------------------------------------------------
MAV_3964|M.avium_104                --------------------------------------------------
MSMEG_0296|M.smegmatis_MC2_155      --------------------------------------------------
TH_0263|M.thermoresistible__bu      --------------------------------------------------
MLBr_02696|M.leprae_Br4923          MFSYITTKSWNPGNQSRYSRPRRLSAYNGLYPKYFDVLDFTNDDPLHPAP
                                                                                      

Mb2911|M.bovis_AF2122/97            -----------------------------------MGLADDAPLGYLLYR
Rv2887|M.tuberculosis_H37Rv         -----------------------------------MGLADDAPLGYLLYR
MMAR_1822|M.marinum_M               -----------------------------------MGQAEEAPLGFLLYR
MUL_2070|M.ulcerans_Agy99           --------------------------------MVDMGQAEEAPLGFLLYR
MAB_2472c|M.abscessus_ATCC_199      -------------------------------------------MGILVSQ
Mflv_2467|M.gilvum_PYR-GCK          -----------------------------MDAHDVAGIELTDNILWLLKQ
Mvan_4187|M.vanbaalenii_PYR-1       -----------------------------MDARDVTGIELTDNILWLLKQ
MAV_3964|M.avium_104                -------------------------------------MELTDNILWLLKQ
MSMEG_0296|M.smegmatis_MC2_155      -------------------------------------MELTDNTLWWLKQ
TH_0263|M.thermoresistible__bu      -------------------------------VADDLAMEFGDNLLWHLKQ
MLBr_02696|M.leprae_Br4923          PHLRPPLQLAHTRSLNARHIALNCRLMADSEFTAHEVTELADGLHRALSK
                                                                                   : :

Mb2911|M.bovis_AF2122/97            VGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHASVTPQA
Rv2887|M.tuberculosis_H37Rv         VGAVLRPEVSAALSPLGLTLPEFVCLRMLSQSPGLSSAELARHASVTPQA
MMAR_1822|M.marinum_M               AAAVLRPEVSTALSPLGLTLPEFVCLRILSASPGLSSAELARHTNVTPQA
MUL_2070|M.ulcerans_Agy99           AAAVLRPEVSTALSPLGLTLPEFVCLRILSASPGLSSAELARHTNVTSQA
MAB_2472c|M.abscessus_ATCC_199      MYRLLWSRASVIVRDFGVTVPQMECLAVLSAQPGISNVEIAAELRITPQA
Mflv_2467|M.gilvum_PYR-GCK          AFYFSLTSVNEAVSEHGVSTAQIGVLRQLANEPGLSGAELARRLLISPQG
Mvan_4187|M.vanbaalenii_PYR-1       AFYFSLTTVNEAISEHGVSTAQIGVLRQLANEPGLSGAELARRLLISPQG
MAV_3964|M.avium_104                AFYYSLTTINEAMREHGVSTAQIGVLRQLANEPGLSGAELARRLLISPQG
MSMEG_0296|M.smegmatis_MC2_155      AFYFSLTAVNDAVKDHGVSTAQIGVLRQLSNEPGLSGAELARRLLITPQG
TH_0263|M.thermoresistible__bu      AWYFSLTAVNDAVSKHGVSTAQIGVLRQLSNEPGLSGAELARRLLITPQG
MLBr_02696|M.leprae_Br4923          LFSILRRRTPNGAVSGELTLAQLSILVTLLDQGPIRMTDLAAHERVRTPT
                                                     :: .::  *  *  .  :  .::* .  : .  

Mb2911|M.bovis_AF2122/97            MNTVLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADA
Rv2887|M.tuberculosis_H37Rv         MNTVLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAEAVVRAADA
MMAR_1822|M.marinum_M               MNTVLRKLEEVGAVSRPASVPSGRALPATLTAPGRALLKRAEVVVRGADD
MUL_2070|M.ulcerans_Agy99           MNTVLRKLEEVGAVSRPASVPSGRALPATLTAPGRALLKRAEVVVRGADD
MAB_2472c|M.abscessus_ATCC_199      VSLVQRSLEEAGLVHRSRRQADARVLTTELTAKGRKLFERADATLREDDE
Mflv_2467|M.gilvum_PYR-GCK          VQLALTALERRGLVERKQNPSHGRILQAFLTDQGRDVAAAVVQDAIAAHD
Mvan_4187|M.vanbaalenii_PYR-1       VQLALTALERQGLVERKQNPAHGRILQAFLTDKGRKVAAAVLHDAIAAHD
MAV_3964|M.avium_104                VQLALTALERRGLVERKRDPQHARILQAHLTGEGRKVAETVVNDAIAAHQ
MSMEG_0296|M.smegmatis_MC2_155      VQLALTALEKRGLVERKQDPQHARILQVFLTEEGRAVASSVVSDAIAAHD
TH_0263|M.thermoresistible__bu      VQLALKSLEQRGLIERRPDPQHARILKVYLTREGRSVAKAVVGDAIAAHE
MLBr_02696|M.leprae_Br4923          TTVAIRRLEKIGLVKRSRDLSDLRAVLVDITPRGRTVHGESLANRRAALT
                                       .   **  * : *       * : . :*  ** :             

Mb2911|M.bovis_AF2122/97            RVLARLTAPQQREFKRMLEKLGSD-------------------
Rv2887|M.tuberculosis_H37Rv         RVLARLTAPQQREFKRMLEKLGSD-------------------
MMAR_1822|M.marinum_M               RILAKLTPAEQREFKRMLEMLGTE-------------------
MUL_2070|M.ulcerans_Agy99           RILAKLTPAEQREFKRMLEMLGTE-------------------
MAB_2472c|M.abscessus_ATCC_199      EILANMTERDRVQLRRLLGGVIETISAR---------------
Mflv_2467|M.gilvum_PYR-GCK          KVFGVLSKAEQKTLRELLGRVVEQGTGHELFADHVDT------
Mvan_4187|M.vanbaalenii_PYR-1       RVFGVLSKAEQQTLRELLGRVVEQGTGHELYTDHVDP------
MAV_3964|M.avium_104                EVFGVLTEQEQQTLRELLGRVVEKGTGHELFTDHVDG------
MSMEG_0296|M.smegmatis_MC2_155      RVFGVLSRDEQEQLRDLLRRVIEQGTGHTVQADHVDPM-----
TH_0263|M.thermoresistible__bu      AVFGVLTPEEQRTLRDLLARVVEKGTGHTLADDHITD------
MLBr_02696|M.leprae_Br4923          TMLSQLPTSDLNILKNALAPLQRLASGEPVSSPAGDSPACKQA
                                     ::. :.  :   ::  *  :