For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
DVLSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAMLTGAQLGVTVSS ILLGRVGEPAVVKLLQLSFGLSGVPPALLHTLSLAIVVALHVLLGEMVPKNIALAGPERTAMLLVPPYLV YVRLARPFIAFYNNCANAILRLVGVQPKDELDIAVSTAELSEMIAESLSEGLLDHEEHTRLTRALRIRTR LVADVAVPLVNIRAVQVSAVGSGPTIGGVEQALAQTGYSRFPVVDRGGRFIGYLHIKDVLTLGDNPQTVI DLAVVRPLPRVPQSLPLADALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDGTHR*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv1841c | - | - | 100% (345) | hypothetical protein Rv1841c |
M. tuberculosis H37Rv | Rv1842c | - | 6e-42 | 32.28% (347) | hypothetical protein Rv1842c |
M. tuberculosis H37Rv | Rv2366c | - | 4e-13 | 27.91% (172) | transmembrane protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1872c | - | 0.0 | 98.85% (349) | hypothetical protein Mb1872c |
M. gilvum PYR-GCK | Mflv_3365 | - | 1e-131 | 69.94% (346) | hypothetical protein Mflv_3365 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_2410c | - | 1e-126 | 66.95% (348) | hypothetical protein MAB_2410c |
M. marinum M | MMAR_2715 | - | 1e-146 | 78.22% (349) | hypothetical protein MMAR_2715 |
M. avium 104 | MAV_2879 | - | 1e-139 | 75.81% (339) | CBS domain-containing protein |
M. smegmatis MC2 155 | MSMEG_3638 | - | 1e-131 | 69.19% (357) | CBS domain-containing protein |
M. thermoresistible (build 8) | TH_0286 | - | 1e-134 | 71.35% (349) | CBS domain protein |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_3095 | - | 1e-134 | 72.54% (346) | hypothetical protein Mvan_3095 |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_3638|M.smegmatis_MC2_155 MG-DVFGVLLTVLLLAANAFFVAAEFALISARRDRLQALAEQGKKSAITV TH_0286|M.thermoresistible__bu MG-DLFGVLLTVLLLGANAFFVAAEFSLISARRDRLEALAEQGKKSAVTV Mflv_3365|M.gilvum_PYR-GCK MG-DIFGVLLTFVLLGANAFFVASEFALISARRDRLEALAEQGKSSAVTV Mvan_3095|M.vanbaalenii_PYR-1 MG-DVFGVLLTFVLLGANAFFVASEFALISARRDRLEALAEQGKSSAVTV MAB_2410c|M.abscessus_ATCC_199 MGSDILGVLLTAALLLANAFFVGAEFALISARRDRLEALAEAGKKRAVTV Rv1841c|M.tuberculosis_H37Rv MD-VLSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTV Mb1872c|M.bovis_AF2122/97 MD-VLSAVLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTV MMAR_2715|M.marinum_M MN-PVLAVALAVLLIAANAFFVGAEFALISARRDRLEALAEQGRTSAVTV MAV_2879|M.avium_104 MS-DTMGVLLACLLIGVNAFFVGAEFSLISARRDRLEALAEQGRAAAVTV *. .* *: *: .*****.:**:*********:**** *: *:** MSMEG_3638|M.smegmatis_MC2_155 IRAGEHLSLMLAGSQLGITICSILLGRVGEPAVAHLLEKPFALIGVSDTV TH_0286|M.thermoresistible__bu IRAGEQLSLMLAGSQLGITICSILLGRIGEPAVAHLLEKPFDLLGVPDAV Mflv_3365|M.gilvum_PYR-GCK IRAGENLSLMLAGSQLGITICSILLGRVAEPAVAHLLEKPFDLVGIPDAL Mvan_3095|M.vanbaalenii_PYR-1 IRAGENLSLMLAGSQLGITVCSILLGRVAEPAVAHLLEKPFGLVGIPDAV MAB_2410c|M.abscessus_ATCC_199 MMAGQNLSLMLAGAQLGITICSILLGRVGEPAVAHLLERPFELLGAPAAV Rv1841c|M.tuberculosis_H37Rv IRAGEQLPAMLTGAQLGVTVSSILLGRVGEPAVVKLLQLSFGLSGVPPAL Mb1872c|M.bovis_AF2122/97 IRAGEQLPAMLTGAQLGVTVSSILLGRVGEPAVVKLLQLSFGLSGVPPAL MMAR_2715|M.marinum_M IRAAEQLPSMLAGAQFGVTVSSILLGRIAEPAAAQTLQRWFGLAGLDPRL MAV_2879|M.avium_104 IRASEQLPSMLAGAQLGVTAASLLLGRIGESAVSNLLRTVLGLTRIHPAL : *.::*. **:*:*:*:* .*:****:.*.*. : *. : * : MSMEG_3638|M.smegmatis_MC2_155 LHTVSFVVALAVVVILHVLLGEMVPKNIAIAGPETAAMLLIPPYLLYIRA TH_0286|M.thermoresistible__bu LHSVSFVVALSIVVILHVLLGEMVPKNIAIAGPEKSAMLLVPTFLVYMRA Mflv_3365|M.gilvum_PYR-GCK LHTVSFLVALSIVVTLHVLLGEMVPKNIAIAGPESTAMLLIPVYLLYIRI Mvan_3095|M.vanbaalenii_PYR-1 LHTVSFLVALSIVVTLHVLLGEMVPKNIAIAGPESTAMLLIPVYLVYIRM MAB_2410c|M.abscessus_ATCC_199 THTVAFVISLSIVVLLHVLLGEMVPKNIAIAGPESAAMLLIPPYLVYIRL Rv1841c|M.tuberculosis_H37Rv LHTLS----LAIVVALHVLLGEMVPKNIALAGPERTAMLLVPPYLVYVRL Mb1872c|M.bovis_AF2122/97 LHTLSLAVALAIVVALHVLLGEMVPKNIALAGPERTAMLLVPPYLVYVRL MMAR_2715|M.marinum_M LHTLSFVVALAIVVTLHVLLGEMVPKNIALAGPERTAMLLVPAYLPYVRA MAV_2879|M.avium_104 LHSLSLAIALAIVVTLHVLLGEMVPKNIALAGPERTAMLLVPPYLAYVRA *::: *::** **************:**** :****:* :* *:* MSMEG_3638|M.smegmatis_MC2_155 ARPFIAFYNWCANATLRAFGVEPRDELASAVSTVELSEMIAESVSEGLLD TH_0286|M.thermoresistible__bu VRPLIAFYNWCANATLRAFRVQPRDELDVTVSTVELSEMIAESVSEGLLD Mflv_3365|M.gilvum_PYR-GCK ARPFIAFYNWCANSTLRAFGVEPKDELDVTVSTVELSEMIAESLSEGLLD Mvan_3095|M.vanbaalenii_PYR-1 ARPFIAFYNWCANATLRAFGVEPKDELDVTVSTVELSEMIAESLSEGLLD MAB_2410c|M.abscessus_ATCC_199 ARPLIAFYNWCANTALRLVKVPVKDELEVTVSTVELSEMIAESLSEGLLD Rv1841c|M.tuberculosis_H37Rv ARPFIAFYNNCANAILRLVGVQPKDELDIAVSTAELSEMIAESLSEGLLD Mb1872c|M.bovis_AF2122/97 ARPFIAFYNNCANAILRLVGVQPKDELDIAVSTAELSEMIAESLSEGLLD MMAR_2715|M.marinum_M ARPIIFLYNKCANAILRIFGVQPKDELDITVSTVELSEMIAESVSEGLLD MAV_2879|M.avium_104 ARPFIAFYNRCASVMVRALGVEPKEELEITVSPVELSEMIAESESEGLLD .**:* :** **. :* . * ::** :**..********* ****** MSMEG_3638|M.smegmatis_MC2_155 TEEHSRLTRALQTRTRTVTDVAMPLSGIHAVSVAGPGCGPTVGAVEQALA TH_0286|M.thermoresistible__bu PEEHSRLTRALQIRTRVVNDVAMPLDQIRTVPVAGPGRGPTVGAVEQALK Mflv_3365|M.gilvum_PYR-GCK PEEHTRLTRALQIRNRVVDDVAMPLHRIRAVPAAHDGAGPTVGALEEALR Mvan_3095|M.vanbaalenii_PYR-1 PEEHTRLTRALQIRNRVVNDVAMPLHQIRAVPVAQEGAGPTVGALEEALK MAB_2410c|M.abscessus_ATCC_199 EEEHTRLRRALQIQHRVVADVVVPANQIRSIAVSGSAQAPSVTAVERAVT Rv1841c|M.tuberculosis_H37Rv HEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPTIGGVEQALA Mb1872c|M.bovis_AF2122/97 HEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPTIGGVEQALA MMAR_2715|M.marinum_M PEEHTRLTRALRIRTRVVDDVAVPLPNIRAVPVAAAGSGPTIGAVEQALA MAV_2879|M.avium_104 REEHTRLTRALQLRHRVVGDVAVPLARVHAVPVAAPGSGPTVGAVEQALA ***:** ***: : * * **.:* :::: .: . .*:: .:*.*: MSMEG_3638|M.smegmatis_MC2_155 ETGYSRFPVTDASGTFIGYLHIKDVLLQVN---EPDSVVDLAMVRPLPQV TH_0286|M.thermoresistible__bu ATGYSRFPVTAPSGEFLGYLHIKDVLPFAD---DPETVLDLSMVRPLPAL Mflv_3365|M.gilvum_PYR-GCK ETGYSRFPVADSTGAFVGYLHIKDVLPLVNGNYDSSTAVEASLVRPLPRV Mvan_3095|M.vanbaalenii_PYR-1 ETGYSRFPVADPTGAYIGYLHIKDVLPLVAGDSGGTAVIETSMVRPLPRV MAB_2410c|M.abscessus_ATCC_199 ETGYSRFPVIGPRGDYLGYLHIKDVLTMGD---DPEAIVDPAFIRPLPRL Rv1841c|M.tuberculosis_H37Rv QTGYSRFPVVDRGGRFIGYLHIKDVLTLGD---NPQTVIDLAVVRPLPRV Mb1872c|M.bovis_AF2122/97 QTGYSRFPVVDRGGRFIGYLHIKDVLTLGD---NPQTVIDLAVVRPLPRV MMAR_2715|M.marinum_M ETGYSRFPVLGLDQHFIGYLHIKDVLALGD---DPATVIDLALVRPLPQL MAV_2879|M.avium_104 QTGYSRFPVTNPTGDFIGYLHIKDVLTLDD---DPATVINLAKVRPLPRL ******** ::********* : :: : :**** : MSMEG_3638|M.smegmatis_MC2_155 PASLPVPDALSRMRRSNSHLALVVDDSLIDVHGSTAHTAADNTVTAMVAL TH_0286|M.thermoresistible__bu PASLPLPEALSRMRRNNSHLALVTTD---------------GRVTAMVAL Mflv_3365|M.gilvum_PYR-GCK PASLPLPDALTRLRRTNSHLALVTAA--------------DGDATAVVAL Mvan_3095|M.vanbaalenii_PYR-1 PASLPLPDALTRLRRTNSHLALVTAG--------------DGTPTAMVAL MAB_2410c|M.abscessus_ATCC_199 HGSVPLPEALSTLRRSNSHLALMSTT--------------DGSVVGLVTL Rv1841c|M.tuberculosis_H37Rv PQSLPLADALSRMRRINSHLALVTAD--------------NGSVVGMVAL Mb1872c|M.bovis_AF2122/97 PQSLPLADALSRMRRINSHLALVTAD--------------NGSVVGMVAL MMAR_2715|M.marinum_M AKSLPLPDALSRMRRSNSHLALVTSD--------------DGAVAGMVAL MAV_2879|M.avium_104 PRSLPLADGLSRMRRSNSHLALVTDQ--------------GGAVVAMVAM *:*:.:.*: :** ******: . ..:*:: MSMEG_3638|M.smegmatis_MC2_155 EDLVEDLVGTVRDGTHRV TH_0286|M.thermoresistible__bu EDLVEDLVGTVRDGTHRV Mflv_3365|M.gilvum_PYR-GCK EDLVEDLVGTVRDSTHRV Mvan_3095|M.vanbaalenii_PYR-1 EDLVEDLVGTVRDSTHRI MAB_2410c|M.abscessus_ATCC_199 EDLVEDLVGTVRDGTHRI Rv1841c|M.tuberculosis_H37Rv EDVVEDLVGTMRDGTHR- Mb1872c|M.bovis_AF2122/97 EDVVEDLVGTMRDGTHR- MMAR_2715|M.marinum_M EDLVEDLVGTLSDGKHRN MAV_2879|M.avium_104 EDLVEDLVGTMREA---- **:*******: :.