For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VISTTRIDFLWILSVAFASMIALATLLTLINQVVGTPYIPGGDSPAGTDCSELASWVSNAATARPVFGDR FNTGNEEAALAARGFQQGTAPNALVIGWNGHHTAVTLPDGTPVSSGEGGGVRVGGGGAYQPKFTHHMYLP MDVDAGEDQPPAPDEPVTAVDDVEPEMPAPCPTQRPPVTPRHNLCNKLRTMPGALSAALAAAAPVWPAPI SGCRGFSTSLLAKRNHPVIVGK
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. tuberculosis H37Rv | Rv1115 | - | - | 100% (232) | POSSIBLE EXPORTED PROTEIN |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1145 | - | 1e-137 | 99.57% (232) | hypothetical protein Mb1145 |
| M. gilvum PYR-GCK | Mflv_3272 | - | 2e-57 | 61.05% (190) | hypothetical protein Mflv_3272 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_4681c | - | 3e-53 | 57.53% (186) | hypothetical protein MAB_4681c |
| M. marinum M | MMAR_4345 | - | 2e-75 | 77.53% (178) | hypothetical protein MMAR_4345 |
| M. avium 104 | MAV_1247 | - | 4e-40 | 59.72% (144) | hypothetical protein MAV_1247 |
| M. smegmatis MC2 155 | MSMEG_3499 | - | 2e-58 | 63.10% (168) | hypothetical protein MSMEG_3499 |
| M. thermoresistible (build 8) | TH_1512 | - | 8e-31 | 75.32% (77) | POSSIBLE EXPORTED PROTEIN |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_2991 | - | 1e-57 | 60.53% (190) | hypothetical protein Mvan_2991 |
CLUSTAL 2.0.9 multiple sequence alignment
Rv1115|M.tuberculosis_H37Rv MISTTRIDFLWILSVAFASMIALATLLTLINQVVGTPYIPGGDSPAGTDC
Mb1145|M.bovis_AF2122/97 MISTTRIDFLWILSVAFAPMIALATLLTLINQVVGTPYIPGGDSPAGTDC
MMAR_4345|M.marinum_M MISATNFDFLWILSVASVLMIALATLLTLINQVSGTPYIVGGDSPAGTDC
MSMEG_3499|M.smegmatis_MC2_155 -------------------MFALATLMALVQQVSGTPYVSGGDSPSGTDC
TH_1512|M.thermoresistible__bu --------------------------------------------------
MAB_4681c|M.abscessus_ATCC_199 -------------------MSDLAALLAFIHQVSGTPYISGGDTARGTDC
Mflv_3272|M.gilvum_PYR-GCK -------------------MFALATLLTLVNQVSGTPYVVGGDSPSGTDC
Mvan_2991|M.vanbaalenii_PYR-1 ---------------MSVRMFALATLLTLVNQVSGTPYVSGGDSPAGTDC
MAV_1247|M.avium_104 --------------------------------------------------
Rv1115|M.tuberculosis_H37Rv SELASWVSNAATARPVFGDRFNTGNEEAALAARGFQQGTAPNALVIGWNG
Mb1145|M.bovis_AF2122/97 SELASWVSNAATARPVFGDRFNTGNEEAALAARGFQQGTAPNALVIGWNG
MMAR_4345|M.marinum_M SGLASWVSNAATDRPIFGDRFNTGNEEAALAARGFQHGTAPNALVIGWNG
MSMEG_3499|M.smegmatis_MC2_155 SGLASWVSNVATGRPAFGDRFHTGNQEQALLARGFKYGTQPGALVIGWNS
TH_1512|M.thermoresistible__bu ------VANVATGRPAFGDRFHTGNQEAALLARGFKYGTAPGALVIGWNS
MAB_4681c|M.abscessus_ATCC_199 SGLASWVANVATDRPAFGSRFNTGNQERALLARGFKYGTAPGALVIGWNG
Mflv_3272|M.gilvum_PYR-GCK SGLVSWVTNAATGRPVYGDRFHTGNIESALLARGFQYGTQPGALVVGWNS
Mvan_2991|M.vanbaalenii_PYR-1 SGLVSWVTNAATGRPVYGDRFHTGNIESALLARGFQYGTQPGALVVGWNR
MAV_1247|M.avium_104 ---------------MFGDRFNTGNEEAALLARGFQYGTAPNALVIGWNG
:*.**:*** * ** ****: ** *.***:***
Rv1115|M.tuberculosis_H37Rv HHTAVTLPDGTPVSSGEGGGVRVGGGGAYQPKFTHHMYLPMDVDAGEDQP
Mb1145|M.bovis_AF2122/97 HHTAVTLPDGTPVSSGEGGGVRVGGGGAYQPKFTHHMYLPMDVDAGEDQP
MMAR_4345|M.marinum_M RHTAVTLPDGTSVSSGEGGGVRVGGGGAYQAQFTHHMYLPMDEDMVDVDL
MSMEG_3499|M.smegmatis_MC2_155 GHTAVTLPDGTPVSSGEGGGVKIGGGGAYQPQFNHHMYLPAEEVQPDAGL
TH_1512|M.thermoresistible__bu THTAVTLPDGTPVSAGEGGGVKIGGGGAFXXPFG----------------
MAB_4681c|M.abscessus_ATCC_199 GHTAVTLPDGTAVSSGEGGGVRIGGGGAYQPQFKRHMYLPMD--------
Mflv_3272|M.gilvum_PYR-GCK GHTAVTLPDGTPVSSGEGGGVRVGGGGAYQDQFTNHMFLPAPAAVPPPPD
Mvan_2991|M.vanbaalenii_PYR-1 GHTAVTLPDGTPVSSGEGGGVKIGGGGAYQEQFTNHMFLPAPAEAVPAPD
MAV_1247|M.avium_104 GHTAVTLPDGTAVSSGEHGGVHVGGAGAYQAGFTHHMFLPMPPEDGGAPP
**********.**:** ***::**.**: *
Rv1115|M.tuberculosis_H37Rv PAPDEPVTAVDDVEPEMPAPCPTQRPPVTPRHNLCNKLRTMPGALSAALA
Mb1145|M.bovis_AF2122/97 PAPDEPVTAVDDVEPEMPAPCPTQRPPVTPRHNLCNKLRTMPGALSAALA
MMAR_4345|M.marinum_M PAPEDPPAVEDVVNPDELPP-----PPEDP--------------------
MSMEG_3499|M.smegmatis_MC2_155 PVGAPP--PPEASLPPLPPPPADPMAPAPPMAGPPPVDPFAPPPP-----
TH_1512|M.thermoresistible__bu --------------------------------------------------
MAB_4681c|M.abscessus_ATCC_199 ---------------------SDDAAGSAPLDVPADAE--GPEVI-----
Mflv_3272|M.gilvum_PYR-GCK PFLSPP--INQLPPPP--------PPGAAPVVMMGHETALPPGAPLPPPP
Mvan_2991|M.vanbaalenii_PYR-1 PVLAPP--MSPFPPPPGAVPPPPPPPPAGPVVLMGQQAPVPP-------P
MAV_1247|M.avium_104 PAMFGPPPPPDAPPPPPDAPAPPPDAPPAP--------------------
Rv1115|M.tuberculosis_H37Rv AAAPVWPAPISGCRGFSTSLLAKRNHPVIVGK
Mb1145|M.bovis_AF2122/97 AAAPVWPAPISGCRGFSTSLLAKRNHPVIVGK
MMAR_4345|M.marinum_M --GPVDDLEISNT-------------------
MSMEG_3499|M.smegmatis_MC2_155 PEPAVVPVVLDVPAPPAPEAPPALGV------
TH_1512|M.thermoresistible__bu --------------------------------
MAB_4681c|M.abscessus_ATCC_199 PASVLVPQPESVPADEAPAQVAPVEI------
Mflv_3272|M.gilvum_PYR-GCK PGAPVPPPPPGMPVPPPPPGAPA---------
Mvan_2991|M.vanbaalenii_PYR-1 PGAPVPPPP-GAPVPPAP--------------
MAV_1247|M.avium_104 PEAPAVLIDAPAPVPPPPPGP-----------