For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SGQADTATTAEARTPAHAAHHLVEGVARVLTKPRFRGWIHVYSAGTAVLAGASLVAVSWAVGSAKAGLTT LAYTAATITMFTVSATYHRVNWKSATARNWMKRADHSMIFVFIAGSYTPFALLALPAHDGRVVLSIVWGG AIAGILLKMCWPAAPRSVGVPLYLLLGWVAVWYTATILHNAGVTALVLLFVGGALYSIGGILYAVRWPDP WPTTFGYHEFFHACTAVAAICHYIAMWFVVF*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv1085c | - | - | 100% (242) | POSSIBLE HEMOLYSIN-LIKE PROTEIN |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1114c | - | 1e-143 | 100.00% (242) | hemolysin-like protein |
M. gilvum PYR-GCK | Mflv_2054 | - | 2e-98 | 70.48% (227) | hemolysin III family channel protein |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_1208c | - | 1e-87 | 61.92% (239) | hypothetical protein MAB_1208c |
M. marinum M | MMAR_4381 | - | 1e-126 | 88.21% (246) | hemolysin-like protein |
M. avium 104 | MAV_1210 | - | 3e-98 | 68.29% (246) | channel protein, hemolysin III family protein |
M. smegmatis MC2 155 | MSMEG_5257 | - | 2e-95 | 67.22% (241) | channel protein, hemolysin III family protein |
M. thermoresistible (build 8) | TH_2166 | - | 2e-94 | 68.64% (220) | POSSIBLE HEMOLYSIN-LIKE PROTEIN |
M. ulcerans Agy99 | MUL_0194 | - | 1e-126 | 87.80% (246) | hemolysin-like protein |
M. vanbaalenii PYR-1 | Mvan_4663 | - | 1e-97 | 70.48% (227) | hemolysin III family channel protein |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_2054|M.gilvum_PYR-GCK -MPLSGGEMPTSLEPWYSADRSQG-----PEDLPEAVAEGVAQFFGKPRL Mvan_4663|M.vanbaalenii_PYR-1 --------MPTTLEPWYTADSPGE-----PEDLPEAVAEGVAQFLGKPRL MSMEG_5257|M.smegmatis_MC2_155 MTAPIDGSHDRRTAPYRSAAADAAGSQRQAEDLPAAVADGVAQFFGKPRA TH_2166|M.thermoresistible__bu --------MTTRLDNTSDFEDPSAR--EHAEDFPEAVVDRVAHAIGKPRA Rv1085c|M.tuberculosis_H37Rv --------MSGQADTATTAEARTP------AHAAHHLVEGVARVLTKPRF Mb1114c|M.bovis_AF2122/97 --------MSGQADTATTAEARTP------AHAAHHLVEGVARVLTKPRF MMAR_4381|M.marinum_M --------MSSQASMASTAEPEPQG--LAVPNAAHHLVEGVARALTKPRF MUL_0194|M.ulcerans_Agy99 --------MSSQASMASTAEPEPQG--LAVPNAAHHLVEGVARALTKPRF MAV_1210|M.avium_104 --------MSSQTSTAPNPEPDHEA--IVPGNTVEQLVEGAAQVLGKPRM MAB_1208c|M.abscessus_ATCC_199 --------MQTDESPAPEAPEAPTS---ELSIPMAALVGGIETLPIKPKA :. **: Mflv_2054|M.gilvum_PYR-GCK RGWIHVYSAVIAVICGSALVAVSWSAQSTRSGIATLIYTLTIVAMFAVSG Mvan_4663|M.vanbaalenii_PYR-1 RGWIHVYSAVIAVICGVTLVAVSWSLESTRAGIATLIYTLTIVAMFTVSG MSMEG_5257|M.smegmatis_MC2_155 RGWIHVYSAIVALIAGAALVSVSWSVQSTRAGLATLLYTFTIVAMFTVSG TH_2166|M.thermoresistible__bu RGWIHVYAAVISAIAGATLVSVSWAVDSTRAGIATLIYTITSVAMFTVSG Rv1085c|M.tuberculosis_H37Rv RGWIHVYSAGTAVLAGASLVAVSWAVGSAKAGLTTLAYTAATITMFTVSA Mb1114c|M.bovis_AF2122/97 RGWIHVYSAGTAVLAGASLVAVSWAVGSAKAGLTTLAYTAATITMFTVSA MMAR_4381|M.marinum_M RGWIHVYSAGTAVLAGASLVAVSWAVGSTEAGLATLAYIAATVVMFTVSA MUL_0194|M.ulcerans_Agy99 RGWIHVYSAGTAVLAGASLVAVSWAVGSTEAGLATLAYVAATVVMFTVSA MAV_1210|M.avium_104 RGWIHFYSAWLAVITGATLVSVSWAAASPRAGHSTLIYAAATVALFAVSA MAB_1208c|M.abscessus_ATCC_199 RGWIHFYACVIAIVTGIVLVSVAWSLRSPKAGLATAIYSLTVLGVFGVSA *****.*:. : : * **:*:*: *..:* :* * : : :* **. Mflv_2054|M.gilvum_PYR-GCK TYHRVNWTSATARKWMKRADHSMIFLFIAGSYTPFALLALPENDGMVLLW Mvan_4663|M.vanbaalenii_PYR-1 VYHRVNWTSVTARKWMKRADHSMIFLFIAGSYTPFALLALPERDGMVLLW MSMEG_5257|M.smegmatis_MC2_155 VYHRVNWTSVTARKWMKRLDHSMIFLFIAGSYTPFALLALPESKGMVLFW TH_2166|M.thermoresistible__bu VYHRYSWRSETARTWMMRADHSMIFIFIAGSYTPFGMLALPEGSGNVLLA Rv1085c|M.tuberculosis_H37Rv TYHRVNWKSATARNWMKRADHSMIFVFIAGSYTPFALLALPAHDGRVVLS Mb1114c|M.bovis_AF2122/97 TYHRVNWKSATARNWMKRADHSMIFVFIAGSYTPFALLALPAHDGRVVLS MMAR_4381|M.marinum_M TYHRVNWASATTHKWMKRADHSMIFVFIAGSYTPFALLALPGHDGRVVLS MUL_0194|M.ulcerans_Agy99 TYHRVNWASATTHKWMKRADHSMIFVFIAGSYTPFALLALPGHDGRVVVS MAV_1210|M.avium_104 TYHRVKWKTEAARTRMKRLDHSMIFVFIAGSYTPFARLVMPQNTGVVVLC MAB_1208c|M.abscessus_ATCC_199 AYHRVNWTSPTTRTWMKRLDHSMIFVFIAGSYTPFAMLAMPPSEGNLVLA .*** .* : :::. * * ******:*********. *.:* * ::. Mflv_2054|M.gilvum_PYR-GCK IVWGGALAGVALKMLWPSSPRWLGVPLYILLGWVAVWFIGPIMHGAGVAA Mvan_4663|M.vanbaalenii_PYR-1 IVWAGALAGVALKMLWPSSPRWLGVPLYILLGWVAVWFIGPIAHGAGVAA MSMEG_5257|M.smegmatis_MC2_155 IVWGGAIAGVLLKMFWPSAPRWLGVPLYILLGWVAAWFIGPIMDGAGVAA TH_2166|M.thermoresistible__bu IVWGGALAGVLLKMFWPSAPRWVGVPLYLLLGWVAAWFIGPIANGAGLPA Rv1085c|M.tuberculosis_H37Rv IVWGGAIAGILLKMCWPAAPRSVGVPLYLLLGWVAVWYTATILHNAGVTA Mb1114c|M.bovis_AF2122/97 IVWGGAIAGILLKMCWPAAPRSVGVPLYLLLGWVAVWYTATILHNAGVTA MMAR_4381|M.marinum_M IVWGGAIAGILLKMCWPTAPRWVGVPLYLLLGWVAVWYTATILHNAGVTA MUL_0194|M.ulcerans_Agy99 IVWGGAIAGILLKMCWPTAPRWVGVPLYLLLGWVAVWYTATILHNAGVTA MAV_1210|M.avium_104 IVWGGALAGIALKVCWPTAPRWLGVPLYLLLGWVAIWYAPTILHQAGVAA MAB_1208c|M.abscessus_ATCC_199 IVWGGALAGVILKMCWPTAPRWVGVPLYLLLGWVAVGFFPTLLNGAGVAA ***.**:**: **: **::** :*****:****** : .: . **:.* Mflv_2054|M.gilvum_PYR-GCK VVLLIVGGALYSIGGVLYALKWPNPWPTTFGHHEFFHACTAVAAICHYIA Mvan_4663|M.vanbaalenii_PYR-1 VVLLIVGGALYSIGGVLYALKWPNPWPTTFGHHEFFHACTAVAAICHYIA MSMEG_5257|M.smegmatis_MC2_155 VVLLIVGGALYSVGGVLYALKWPNPWPATFGHHEFFHACTAVAAICHYIA TH_2166|M.thermoresistible__bu VVLLIVGGVLYSVGGVLYALKWPDPWPETFGYHEFFHACTAVAALCHYIA Rv1085c|M.tuberculosis_H37Rv LVLLFVGGALYSIGGILYAVRWPDPWPTTFGYHEFFHACTAVAAICHYIA Mb1114c|M.bovis_AF2122/97 LVLLFVGGALYSIGGILYAVRWPDPWPTTFGYHEFFHACTAVAAICHYIA MMAR_4381|M.marinum_M LVLLFVGGALYSIGGILYAVRWPDPWPSTFGYHEFFHACTAVAAICHYIA MUL_0194|M.ulcerans_Agy99 LVLLFVGGALYSIGGILYAVRWPDPWPSTFGYHEFFHACTAVAAICHYIA MAV_1210|M.avium_104 MVLLAVGGVLYSVGGIFYALRWPDPWPSTFGYHEFFHALTAIAAILHYIA MAB_1208c|M.abscessus_ATCC_199 VVLLIVGGALYSIGAILYAAKWPNPWPLHFGHHEFFHAATVIAATCHYIA :*** ***.***:*.::** :**:*** **:****** *.:** **** Mflv_2054|M.gilvum_PYR-GCK MWFAVF----------- Mvan_4663|M.vanbaalenii_PYR-1 MWFAVF----------- MSMEG_5257|M.smegmatis_MC2_155 MWFAVF----------- TH_2166|M.thermoresistible__bu MWFAVF----------- Rv1085c|M.tuberculosis_H37Rv MWFVVF----------- Mb1114c|M.bovis_AF2122/97 MWFVVF----------- MMAR_4381|M.marinum_M MWFVVF----------- MUL_0194|M.ulcerans_Agy99 MWFVVF----------- MAV_1210|M.avium_104 MWFAVFYTGDHAWLATA MAB_1208c|M.abscessus_ATCC_199 VWFAVFA---------- :**.**