For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
QTDESPAPEAPEAPTSELSIPMAALVGGIETLPIKPKARGWIHFYACVIAIVTGIVLVSVAWSLRSPKAG LATAIYSLTVLGVFGVSAAYHRVNWTSPTTRTWMKRLDHSMIFVFIAGSYTPFAMLAMPPSEGNLVLAIV WGGALAGVILKMCWPTAPRWVGVPLYLLLGWVAVGFFPTLLNGAGVAAVVLLIVGGALYSIGAILYAAKW PNPWPLHFGHHEFFHAATVIAATCHYIAVWFAVFA*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. abscessus ATCC 19977 | MAB_1208c | - | - | 100% (246) | hypothetical protein MAB_1208c |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1114c | - | 1e-87 | 61.92% (239) | hemolysin-like protein |
| M. gilvum PYR-GCK | Mflv_2054 | - | 9e-92 | 66.97% (221) | hemolysin III family channel protein |
| M. tuberculosis H37Rv | Rv1085c | - | 1e-87 | 61.92% (239) | hemolysin-like protein |
| M. leprae Br4923 | - | - | - | - | - |
| M. marinum M | MMAR_4381 | - | 5e-89 | 61.94% (247) | hemolysin-like protein |
| M. avium 104 | MAV_1210 | - | 7e-88 | 61.13% (247) | channel protein, hemolysin III family protein |
| M. smegmatis MC2 155 | MSMEG_5257 | - | 4e-93 | 63.33% (240) | channel protein, hemolysin III family protein |
| M. thermoresistible (build 8) | TH_2166 | - | 9e-89 | 68.10% (210) | POSSIBLE HEMOLYSIN-LIKE PROTEIN |
| M. ulcerans Agy99 | MUL_0194 | - | 7e-89 | 61.54% (247) | hemolysin-like protein |
| M. vanbaalenii PYR-1 | Mvan_4663 | - | 1e-91 | 65.24% (233) | hemolysin III family channel protein |
CLUSTAL 2.0.9 multiple sequence alignment
Mb1114c|M.bovis_AF2122/97 --------MSGQADTATTAEARTP------AHAAHHLVEGVARVLTKPRF
Rv1085c|M.tuberculosis_H37Rv --------MSGQADTATTAEARTP------AHAAHHLVEGVARVLTKPRF
MMAR_4381|M.marinum_M --------MSSQASMASTAEPEPQG--LAVPNAAHHLVEGVARALTKPRF
MUL_0194|M.ulcerans_Agy99 --------MSSQASMASTAEPEPQG--LAVPNAAHHLVEGVARALTKPRF
MAV_1210|M.avium_104 --------MSSQTSTAPNPEPDHEA--IVPGNTVEQLVEGAAQVLGKPRM
Mflv_2054|M.gilvum_PYR-GCK -MPLSGGEMPTSLEPWYSADRSQG-----PEDLPEAVAEGVAQFFGKPRL
Mvan_4663|M.vanbaalenii_PYR-1 --------MPTTLEPWYTADSPGE-----PEDLPEAVAEGVAQFLGKPRL
MSMEG_5257|M.smegmatis_MC2_155 MTAPIDGSHDRRTAPYRSAAADAAGSQRQAEDLPAAVADGVAQFFGKPRA
TH_2166|M.thermoresistible__bu --------MTTRLDNTSDFEDPSAR--EHAEDFPEAVVDRVAHAIGKPRA
MAB_1208c|M.abscessus_ATCC_199 --------MQTDESPAPEAPEAPTS---ELSIPMAALVGGIETLPIKPKA
:. **:
Mb1114c|M.bovis_AF2122/97 RGWIHVYSAGTAVLAGASLVAVSWAVGSAKAGLTTLAYTAATITMFTVSA
Rv1085c|M.tuberculosis_H37Rv RGWIHVYSAGTAVLAGASLVAVSWAVGSAKAGLTTLAYTAATITMFTVSA
MMAR_4381|M.marinum_M RGWIHVYSAGTAVLAGASLVAVSWAVGSTEAGLATLAYIAATVVMFTVSA
MUL_0194|M.ulcerans_Agy99 RGWIHVYSAGTAVLAGASLVAVSWAVGSTEAGLATLAYVAATVVMFTVSA
MAV_1210|M.avium_104 RGWIHFYSAWLAVITGATLVSVSWAAASPRAGHSTLIYAAATVALFAVSA
Mflv_2054|M.gilvum_PYR-GCK RGWIHVYSAVIAVICGSALVAVSWSAQSTRSGIATLIYTLTIVAMFAVSG
Mvan_4663|M.vanbaalenii_PYR-1 RGWIHVYSAVIAVICGVTLVAVSWSLESTRAGIATLIYTLTIVAMFTVSG
MSMEG_5257|M.smegmatis_MC2_155 RGWIHVYSAIVALIAGAALVSVSWSVQSTRAGLATLLYTFTIVAMFTVSG
TH_2166|M.thermoresistible__bu RGWIHVYAAVISAIAGATLVSVSWAVDSTRAGIATLIYTITSVAMFTVSG
MAB_1208c|M.abscessus_ATCC_199 RGWIHFYACVIAIVTGIVLVSVAWSLRSPKAGLATAIYSLTVLGVFGVSA
*****.*:. : : * **:*:*: *..:* :* * : : :* **.
Mb1114c|M.bovis_AF2122/97 TYHRVNWKSATARNWMKRADHSMIFVFIAGSYTPFALLALPAHDGRVVLS
Rv1085c|M.tuberculosis_H37Rv TYHRVNWKSATARNWMKRADHSMIFVFIAGSYTPFALLALPAHDGRVVLS
MMAR_4381|M.marinum_M TYHRVNWASATTHKWMKRADHSMIFVFIAGSYTPFALLALPGHDGRVVLS
MUL_0194|M.ulcerans_Agy99 TYHRVNWASATTHKWMKRADHSMIFVFIAGSYTPFALLALPGHDGRVVVS
MAV_1210|M.avium_104 TYHRVKWKTEAARTRMKRLDHSMIFVFIAGSYTPFARLVMPQNTGVVVLC
Mflv_2054|M.gilvum_PYR-GCK TYHRVNWTSATARKWMKRADHSMIFLFIAGSYTPFALLALPENDGMVLLW
Mvan_4663|M.vanbaalenii_PYR-1 VYHRVNWTSVTARKWMKRADHSMIFLFIAGSYTPFALLALPERDGMVLLW
MSMEG_5257|M.smegmatis_MC2_155 VYHRVNWTSVTARKWMKRLDHSMIFLFIAGSYTPFALLALPESKGMVLFW
TH_2166|M.thermoresistible__bu VYHRYSWRSETARTWMMRADHSMIFIFIAGSYTPFGMLALPEGSGNVLLA
MAB_1208c|M.abscessus_ATCC_199 AYHRVNWTSPTTRTWMKRLDHSMIFVFIAGSYTPFAMLAMPPSEGNLVLA
.*** .* : :::. * * ******:*********. *.:* * ::.
Mb1114c|M.bovis_AF2122/97 IVWGGAIAGILLKMCWPAAPRSVGVPLYLLLGWVAVWYTATILHNAGVTA
Rv1085c|M.tuberculosis_H37Rv IVWGGAIAGILLKMCWPAAPRSVGVPLYLLLGWVAVWYTATILHNAGVTA
MMAR_4381|M.marinum_M IVWGGAIAGILLKMCWPTAPRWVGVPLYLLLGWVAVWYTATILHNAGVTA
MUL_0194|M.ulcerans_Agy99 IVWGGAIAGILLKMCWPTAPRWVGVPLYLLLGWVAVWYTATILHNAGVTA
MAV_1210|M.avium_104 IVWGGALAGIALKVCWPTAPRWLGVPLYLLLGWVAIWYAPTILHQAGVAA
Mflv_2054|M.gilvum_PYR-GCK IVWGGALAGVALKMLWPSSPRWLGVPLYILLGWVAVWFIGPIMHGAGVAA
Mvan_4663|M.vanbaalenii_PYR-1 IVWAGALAGVALKMLWPSSPRWLGVPLYILLGWVAVWFIGPIAHGAGVAA
MSMEG_5257|M.smegmatis_MC2_155 IVWGGAIAGVLLKMFWPSAPRWLGVPLYILLGWVAAWFIGPIMDGAGVAA
TH_2166|M.thermoresistible__bu IVWGGALAGVLLKMFWPSAPRWVGVPLYLLLGWVAAWFIGPIANGAGLPA
MAB_1208c|M.abscessus_ATCC_199 IVWGGALAGVILKMCWPTAPRWVGVPLYLLLGWVAVGFFPTLLNGAGVAA
***.**:**: **: **::** :*****:****** : .: . **:.*
Mb1114c|M.bovis_AF2122/97 LVLLFVGGALYSIGGILYAVRWPDPWPTTFGYHEFFHACTAVAAICHYIA
Rv1085c|M.tuberculosis_H37Rv LVLLFVGGALYSIGGILYAVRWPDPWPTTFGYHEFFHACTAVAAICHYIA
MMAR_4381|M.marinum_M LVLLFVGGALYSIGGILYAVRWPDPWPSTFGYHEFFHACTAVAAICHYIA
MUL_0194|M.ulcerans_Agy99 LVLLFVGGALYSIGGILYAVRWPDPWPSTFGYHEFFHACTAVAAICHYIA
MAV_1210|M.avium_104 MVLLAVGGVLYSVGGIFYALRWPDPWPSTFGYHEFFHALTAIAAILHYIA
Mflv_2054|M.gilvum_PYR-GCK VVLLIVGGALYSIGGVLYALKWPNPWPTTFGHHEFFHACTAVAAICHYIA
Mvan_4663|M.vanbaalenii_PYR-1 VVLLIVGGALYSIGGVLYALKWPNPWPTTFGHHEFFHACTAVAAICHYIA
MSMEG_5257|M.smegmatis_MC2_155 VVLLIVGGALYSVGGVLYALKWPNPWPATFGHHEFFHACTAVAAICHYIA
TH_2166|M.thermoresistible__bu VVLLIVGGVLYSVGGVLYALKWPDPWPETFGYHEFFHACTAVAALCHYIA
MAB_1208c|M.abscessus_ATCC_199 VVLLIVGGALYSIGAILYAAKWPNPWPLHFGHHEFFHAATVIAATCHYIA
:*** ***.***:*.::** :**:*** **:****** *.:** ****
Mb1114c|M.bovis_AF2122/97 MWFVVF-----------
Rv1085c|M.tuberculosis_H37Rv MWFVVF-----------
MMAR_4381|M.marinum_M MWFVVF-----------
MUL_0194|M.ulcerans_Agy99 MWFVVF-----------
MAV_1210|M.avium_104 MWFAVFYTGDHAWLATA
Mflv_2054|M.gilvum_PYR-GCK MWFAVF-----------
Mvan_4663|M.vanbaalenii_PYR-1 MWFAVF-----------
MSMEG_5257|M.smegmatis_MC2_155 MWFAVF-----------
TH_2166|M.thermoresistible__bu MWFAVF-----------
MAB_1208c|M.abscessus_ATCC_199 VWFAVFA----------
:**.**