For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MVESSTASAAAVLRARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYRRETLRLVAEI GMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVAAPIVSGVALAATV GAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYALALDMAFTSGQVVTTVFYGQSN GTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYYGYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLA ELALYGVDPNFNLTV
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv0588 | yrbE2B | - | 100% (295) | CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE2B |
M. tuberculosis H37Rv | Rv0168 | yrbE1B | e-123 | 76.39% (288) | integral membrane protein YRBE1B |
M. tuberculosis H37Rv | Rv3500c | yrbE4B | 4e-79 | 51.67% (269) | integral membrane protein YrbE4b |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0603 | yrbE2B | 1e-161 | 100.00% (295) | integral membrane protein YrbE2b |
M. gilvum PYR-GCK | Mflv_0712 | - | 1e-117 | 73.01% (289) | hypothetical protein Mflv_0712 |
M. leprae Br4923 | MLBr_02588 | yrbE1B | 1e-121 | 76.04% (288) | hypothetical protein MLBr_02588 |
M. abscessus ATCC 19977 | MAB_4154c | - | 2e-81 | 53.16% (269) | hypothetical protein MAB_4154c |
M. marinum M | MMAR_0411 | yrbE1B | 1e-120 | 75.35% (288) | integral membrane protein YrbE1B |
M. avium 104 | MAV_4552 | - | 1e-147 | 92.71% (288) | hypothetical protein MAV_4552 |
M. smegmatis MC2 155 | MSMEG_0133 | - | 1e-112 | 70.49% (288) | ABC-transporter integral membrane protein |
M. thermoresistible (build 8) | TH_4238 | - | 1e-117 | 73.10% (290) | PUTATIVE protein of unknown function DUF140 |
M. ulcerans Agy99 | MUL_1061 | yrbE1B | 1e-119 | 74.65% (288) | integral membrane protein YrbE1B |
M. vanbaalenii PYR-1 | Mvan_0133 | - | 1e-120 | 75.69% (288) | hypothetical protein Mvan_0133 |
CLUSTAL 2.0.9 multiple sequence alignment Rv0588|M.tuberculosis_H37Rv -----MVESSTASAAAVLRARYPRTAASLDRYGGGTARRLERTGTFARFT Mb0603|M.bovis_AF2122/97 -----MVESSTASAAAVLRARYPRTAASLDRYGGGTARRLERTGTFARFT MAV_4552|M.avium_104 --------MAAISAPGALRARYPRTAANLDRYGGGTVRRLWQIGIFARFA MMAR_0411|M.marinum_M -----------MSTAAVLRARFPRAIANFNRYAGSVTRGLDESGRLAWFI MUL_1061|M.ulcerans_Agy99 -----------MSTAAVLRARFPRAIANFNRYAGSVTRGLDESGRLAWFI MLBr_02588|M.leprae_Br4923 -----------MSTAAVLRARFPRAAANLNRYGGAAARGIDDIGQMSWFG Mflv_0712|M.gilvum_PYR-GCK ----------MSDTAAVLRSRFPRGVARAEKIVGAPGRGLDSIGHVAWFV Mvan_0133|M.vanbaalenii_PYR-1 ----------MS-TSAVLRSRFPRGVATAEKWAGAPARGLEAMGHVAVFV TH_4238|M.thermoresistible__bu VFGSERGADMTVETGTVLRQRFPRAYSTGQRWVGAPARGLNSVGHVAWFV MSMEG_0133|M.smegmatis_MC2_155 ----------MS-TVQVLRSRFPRAFSRSSEIAATPARFLDSMGHVAWFV MAB_4154c|M.abscessus_ATCC_199 ------------MSGPYLSTHTVTSYT--VRYMRGLGRSFDKFGEQALFY : * : : . * : * : * Rv0588|M.tuberculosis_H37Rv RISVVQIGWALRRYRRETLRLVAEIGMGTGAMAVVGGTVAIIGFVTLSGG Mb0603|M.bovis_AF2122/97 RISVVQIGWALRRYRRETLRLVAEIGMGTGAMAVVGGTVAIIGFVTLSGG MAV_4552|M.avium_104 RISIGQIGWALRHYRRETLRLVAEIGMGTGAMAVVGGTVAIIGFVTLSGG MMAR_0411|M.marinum_M LTSLGQSGHALRYYRKEILRLIAQIGMGTGAMAVVGGTAAIVGFVTLSGS MUL_1061|M.ulcerans_Agy99 LTSLGQSGHALRYYRKEILRLIAQIGMGTGAMAVVGGTAAIVGFVTLSGS MLBr_02588|M.leprae_Br4923 LIALGNIPNALSRYRKETLRLIAQIGMGTGAMAVVGGTAAIVGFVTLSGS Mflv_0712|M.gilvum_PYR-GCK VTAVGSIGHAVRYYRKEMLRLIAEIGMGTGAMAVVGGTVAIVGFVTLSGS Mvan_0133|M.vanbaalenii_PYR-1 VTAVGSIGHALRFYRREMLRLIAEIGMGTGAMAVVGGTVAIVGFVTLSGS TH_4238|M.thermoresistible__bu VQAVGMIGHALRHYRRELLRLVAEIGMGTGAMAVVGGTVAIVGFVTLSGG MSMEG_0133|M.smegmatis_MC2_155 VQAIVHVPHAFRHYRRESLRLVAEIGMGTGAMAVIGGTVAIIGFVTLSAG MAB_4154c|M.abscessus_ATCC_199 AQSLSYIPAALTKYRKETIRVLAEITMGTGALVMIGGTVGVAVFLTLASG :: *. **:* :*::*:* *****:.::***..: *:**:.. Rv0588|M.tuberculosis_H37Rv SLIAIQGFASLGNIGVEAFTGFFAALANTRVAAPIVSGVALAATVGAGAT Mb0603|M.bovis_AF2122/97 SLIAIQGFASLGNIGVEAFTGFFAALANTRVAAPIVSGVALAATVGAGAT MAV_4552|M.avium_104 SLIAIQGFASLGNIGVEAFTGFFAALANTRIAAPIVAGVTLAATVGAGAT MMAR_0411|M.marinum_M SLIAIQGFASLGNIGVEAFTGFFSALVNVRIAGPVVTGVALAATVGAGAT MUL_1061|M.ulcerans_Agy99 SLIAIQGFASLGNIGVEAFTGFFSALVNVRIAGPVVTGVALAATVGAGAT MLBr_02588|M.leprae_Br4923 SLVAIQGFASLGAIGVEAFTGFFAALINVRIAAPVITGIVMAATVGAGAT Mflv_0712|M.gilvum_PYR-GCK SLVAIQGFASLGNIGVEAFTGFFAALINVRIAAPVVAGQALAATVGAGAT Mvan_0133|M.vanbaalenii_PYR-1 SLVAIQGFASLGNIGVEAFTGFFAALINVRIAAPVVAGQALAATVGAGAT TH_4238|M.thermoresistible__bu SLIAIQGFASLGNIGVEAFTGFFAALVNVRIAAPVVAGQALAATVGAGAT MSMEG_0133|M.smegmatis_MC2_155 SLIAIQGFASLGNIGVEAFTGFFAALANIRVVAPVVTGQALAATVGAGAT MAB_4154c|M.abscessus_ATCC_199 GVIAVQGYSSLGNIGIEALTGFLSAFLNVRIVAPVVAGIAMAATIGAGTT .::*:**::*** **:**:***::*: * *:..*:::* .:***:***:* Rv0588|M.tuberculosis_H37Rv AQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYALALDMAF Mb0603|M.bovis_AF2122/97 AQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYALALDMAF MAV_4552|M.avium_104 AQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLAVIVPLYALALDMAF MMAR_0411|M.marinum_M AELGAMRISEEIDALEVMGIKSISYLASTRIMAGLVVIIPLYALAMIMSF MUL_1061|M.ulcerans_Agy99 AELGAMRISEEIDALEVMGIQSISYLASTRIMAGLVVIIPLYALAMIMSF MLBr_02588|M.leprae_Br4923 AELGAMRISEEIDALEVMSIKSISFLVTTRILAGLVVIVPLYAVAMIMAF Mflv_0712|M.gilvum_PYR-GCK AELGAMRISEEIDALEVMGIKSISYLVSTRIVAGFVVIIPLYAMAIIMSF Mvan_0133|M.vanbaalenii_PYR-1 AELGAMRISEEIDALEVMGIKSISYLVSTRIMAGFVVIIPLYAMAIIMSF TH_4238|M.thermoresistible__bu AELGAMRISEEVDALEVMAIRSISYLVSTRIIAGFIVIIPLYAMAIIMSF MSMEG_0133|M.smegmatis_MC2_155 AELGAMRISEEVDALEVMGIKSISYLVSTRIMAGAIVIIPLYAMAILLSF MAB_4154c|M.abscessus_ATCC_199 AQLGAMRVAEEIDALETMAVHAISYLVSTRLVAGLIAIIPLYSLSVLAAF *:*****::**:****.*.:::**:*.:**::.* .*:***:::: :* Rv0588|M.tuberculosis_H37Rv TSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHC Mb0603|M.bovis_AF2122/97 TSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHC MAV_4552|M.avium_104 TSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVFEVVIIAVVVMITHC MMAR_0411|M.marinum_M FSPQMVTTVLYGQSSGTYEHYFRTFLRPDDVFWSFLEAIIIAAIVMVTHC MUL_1061|M.ulcerans_Agy99 FSPQMVTTVLYGQSSGTYEHYFRTFLRPDDVFWSFLEAIIIAAIVMVTHC MLBr_02588|M.leprae_Br4923 LSPHIITTVLYGQSNGTYEHYFRTFLRPDDVFWSFLEAVIITAVVMITHC Mflv_0712|M.gilvum_PYR-GCK LSAQATTTIFYGQSTGTYEHYFRTFLRPDDVFWSFVQAVIISVIVMLNHC Mvan_0133|M.vanbaalenii_PYR-1 LSAQVTTTVFYGQSVGTYEHYFRTFLRPDDVFWSFIQAVIISVIVMLNHC TH_4238|M.thermoresistible__bu LSAQVTTTFFYGQSVGTYDHYFRTFLRPDDVMWSFVQAIIISVIVMLNHC MSMEG_0133|M.smegmatis_MC2_155 MSAQLVTTIFYSQSVGTYEHYFHTFLRVDDVMWSFLEVIIMSVIVMLNHC MAB_4154c|M.abscessus_ATCC_199 FASRATTVMINGQSPGVYDHYFNTFLVPTDLLWSFLQAIVMSVVVMLVHT : : *..: .** *.*:***.*** *: **..:.::::.:**: * Rv0588|M.tuberculosis_H37Rv YYGYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV Mb0603|M.bovis_AF2122/97 YYGYTASGGPVGVGQAVGRSMRFSLVSVVVVVLLAELALYGVDPNFNLTV MAV_4552|M.avium_104 YYGYTASGGPVGVGHAVGRSMRFSLVSVVVVVLLAQLALYGVDPNFNLTV MMAR_0411|M.marinum_M YYGYNAGGGPVGVGEAVGRSMRFSLVSVNVVVLCAALALYGVNPNFALTV MUL_1061|M.ulcerans_Agy99 YYGYNAGGGPVGEGEAVGRSMRFSLVSVNVVVLCAALALYGVNPNFALTV MLBr_02588|M.leprae_Br4923 YYGYTANGGPVGVGEAVGRSMRFSLVSVQVVVLSATLALYGVDPNFALTV Mflv_0712|M.gilvum_PYR-GCK YYGFYASGGPVGVGEAVGRSMRASLVAIVCVVLFASLALYGVDPNFNLTV Mvan_0133|M.vanbaalenii_PYR-1 YYGFYASGGPVGVGEAVGRSMRASLVAIVVVVLLASLALYGVDPNFNLTV TH_4238|M.thermoresistible__bu YYGYYASGGPVGVGEAVGRSMRASLVAIVLVVLLASLALYGTDPNFNLTV MSMEG_0133|M.smegmatis_MC2_155 YFGYFASGGAVGVGEAVGRSMRTSLIAIVLVVLLASLALYGTDPNFNLTV MAB_4154c|M.abscessus_ATCC_199 SYGFNASGGPVGVGVAVGQAVRTSLIVVVLVTLFISLAVYGGSGNFNLSG :*: *.**.** * ***:::* **: : *.* **:** . ** *: