For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MPDGEQSQPPAQEDAEDDSRPDAAEAAAAEPKSSAGPMFSTYGIASTLLGVLSVAAVVLGAMIWSAHRDD SGERTYLTRVMLTAAEWTAVLINMNADNIDASLQRLHDGTVGQLNTDFDAVVQPYRQVVEKLRTHSSGRI EAVAIDTVHRELDTQSGAARPVVTTKLPPFATRTDSVLLVATSVSENAGAKPQTVHWNLRLDVSDVDGKL MISRLESIR
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv0199 | - | - | 100% (219) | PROBABLE CONSERVED MEMBRANE PROTEIN |
M. tuberculosis H37Rv | Rv1363c | - | 3e-09 | 22.58% (217) | hypothetical protein Rv1363c |
M. tuberculosis H37Rv | Rv1972 | - | 2e-07 | 25.12% (203) | mce associated membrane protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0205 | - | 1e-121 | 100.00% (219) | hypothetical protein Mb0205 |
M. gilvum PYR-GCK | Mflv_0470 | - | 8e-54 | 49.27% (205) | hypothetical protein Mflv_0470 |
M. leprae Br4923 | MLBr_02614 | - | 5e-78 | 67.58% (219) | hypothetical protein MLBr_02614 |
M. abscessus ATCC 19977 | MAB_4535c | - | 2e-29 | 37.97% (187) | hypothetical protein MAB_4535c |
M. marinum M | MMAR_0439 | - | 1e-85 | 74.88% (211) | hypothetical protein MMAR_0439 |
M. avium 104 | MAV_4976 | - | 2e-86 | 72.15% (219) | hypothetical protein MAV_4976 |
M. smegmatis MC2 155 | MSMEG_0235 | - | 2e-57 | 52.45% (204) | hypothetical protein MSMEG_0235 |
M. thermoresistible (build 8) | TH_2958 | - | 2e-54 | 49.32% (219) | PUTATIVE conserved hypothetical protein |
M. ulcerans Agy99 | MUL_1089 | - | 8e-86 | 74.88% (211) | hypothetical protein MUL_1089 |
M. vanbaalenii PYR-1 | Mvan_0185 | - | 8e-55 | 49.55% (220) | hypothetical protein Mvan_0185 |
CLUSTAL 2.0.9 multiple sequence alignment Rv0199|M.tuberculosis_H37Rv -------------------------------MPDGEQSQPPAQEDAE-DD Mb0205|M.bovis_AF2122/97 -------------------------------MPDGEQSQPPAQEDAE-DD MAV_4976|M.avium_104 -------------------------------MSDGERTEPPAEQDSD-AD MMAR_0439|M.marinum_M -------------------------------MPDDAAADTAKDSDPDSAD MUL_1089|M.ulcerans_Agy99 -------------------------------MPDDAAADTAKDSDPDSAD MLBr_02614|M.leprae_Br4923 ---------------------------MNWPKTPGTLAAMPDEEQTELPV Mflv_0470|M.gilvum_PYR-GCK -------------------------------MPDD------------EQP Mvan_0185|M.vanbaalenii_PYR-1 -------------------------------MPDD------------EQL MSMEG_0235|M.smegmatis_MC2_155 -------------------------------MPDA------------PSK TH_2958|M.thermoresistible__bu MTEQIVLGAHRGVDETQVDAGSNRFNRHSHMLPEAGKCPGNLTAMSDEAT MAB_4535c|M.abscessus_ATCC_199 -----------------------------------------------MSK Rv0199|M.tuberculosis_H37Rv SRPDAAEAAAAEPKSSAGPMFSTYGIASTLLGVLSVAAVVLGAMIWSAHR Mb0205|M.bovis_AF2122/97 SRPDAAEAAAAEPKSSAGPMFSTYGIASTLLGVLSVAAVVLGAMIWSAHR MAV_4976|M.avium_104 EPPEAAD----------GRIFSHYGVASTVLGVLSVAAVVLAALIWSDHR MMAR_0439|M.marinum_M SAPAATEG-----ESSGEGMFSSYGVGSAFLGVLSVAAVVLGVLIWIGHR MUL_1089|M.ulcerans_Agy99 SAPVATEG-----ESSGEGMFSSYGVGSAFLGVLSVAAVVLGVLIWIGHR MLBr_02614|M.leprae_Br4923 HKEFAGIADYSDPGLSDGSVFSQYGIASTVLAVLSAAAVVFGVVIWRAHH Mflv_0470|M.gilvum_PYR-GCK SDPAPGGGV--SGVSGVSGVFSGYGVASAVAGVVAVVAVVLAGLFWSGHR Mvan_0185|M.vanbaalenii_PYR-1 SDPEP------RPEPRRDGVFSAYGIASAVLGVVAVAAAVLALVVWTGHR MSMEG_0235|M.smegmatis_MC2_155 DAPEREPE---TDPGATGGIFSSYGVASAVLGVIAIAAVVLGTMIFTAHR TH_2958|M.thermoresistible__bu AEPAPEQP---EDDREEDRVLSGFGIASTLLALIAVGAVVLGVMIWSGHT MAB_4535c|M.abscessus_ATCC_199 DASASEN----------GPVFSRYGVLSAVLGVITVVALVLSVLITTGHR ::* :*: *:. .::: * *:. :. * Rv0199|M.tuberculosis_H37Rv DDSGERTYLTRVMLTAAEWTAVLINMNADNIDASLQRLHDGTVGQLNTDF Mb0205|M.bovis_AF2122/97 DDSGERTYLTRVMLTAAEWTAVLINMNADNIDASLQRLHDGTVGQLNTDF MAV_4976|M.avium_104 DQVAERSYLSRVMRTAADWANVLINMNSGNVDASLQRLHDGTVGELNTDF MMAR_0439|M.marinum_M DEISERVYLTRVMQAAAEWTDVLINMNAGNIDSSLQQLHDGTVGQLNTDF MUL_1089|M.ulcerans_Agy99 DEISERVYLTRVMQAAAEWTDVLINMNAGNIDSSLQQLHDGTVGQLNTDF MLBr_02614|M.leprae_Br4923 DNSAERAYLTHVMQTAFDWTGVLINMNTSNVDASLQRLHAGTVGELNTDF Mflv_0470|M.gilvum_PYR-GCK ADTDELRYRTQVLQTAADWTGILINLNKDTIEADMARLHDGTVGRLNADF Mvan_0185|M.vanbaalenii_PYR-1 DEADELRYRTQVLQTAADWTGVLINMNSDTVDADMAKLHDGTVGQLNADF MSMEG_0235|M.smegmatis_MC2_155 DEISERDYQTRVLQAAAEWTNVLINMTAETVDADMQKLHEGTVGQLNNDF TH_2958|M.thermoresistible__bu TEADERRHQTEALAAAADWTTVLVNMNTDNVETSLRQLQEGTVGALNADF MAB_4535c|M.abscessus_ATCC_199 SQVARDRYDARVLDTAVTWVNTLINMKKSNLDSSVQTLQDGTAGQLSDHL : . : :..: :* *. *:*:. .:::.: *: **.* *. .: Rv0199|M.tuberculosis_H37Rv DAVVQPYRQVVEKLRTHSSGRIEAVAIDTVHRELD---TQSGAARPVVTT Mb0205|M.bovis_AF2122/97 DAVVQPYRQVVEKLRTHSSGRIEAVAIDTVHRELD---TQSGAARPVVTT MAV_4976|M.avium_104 DAAVQPYRAVVEKLQSKSSGRVDAVAIETVHHDLD---AQPGAARPPVTT MMAR_0439|M.marinum_M DAAVQPYRQVVEKLQTHSSGRIEAVAIETVHRDLD---TRPGTARPVVTT MUL_1089|M.ulcerans_Agy99 DAAVQPYRQVVEKLQTHSSGRIEAVAIETVHRDLD---TRPGTARPVVTT MLBr_02614|M.leprae_Br4923 DAAVQPYRKVVEKLQTQSRGQIEAVAIESVHHDLD---TQPGVAHPVVTT Mflv_0470|M.gilvum_PYR-GCK ESSMEPFRTLVQTLKSSTTGQVDSVAIETIHHDDP---DEPA---APPAT Mvan_0185|M.vanbaalenii_PYR-1 ETAVEPYRKLVQTLRSSTTGQIDSVAIETIHHADP---GSP-----PQEE MSMEG_0235|M.smegmatis_MC2_155 DSAVQPYRELVQRLQSRTTGQLDSVAIESLYHPQP---GPDGRVQQPERA TH_2958|M.thermoresistible__bu EAAMQPYTQLVQKLRSRTRGQVESVAIESVHRQLPPLPGAPPPRQREPQP MAB_4535c|M.abscessus_ATCC_199 GELIAGVVKLARTVDADAAGEIDSVAIDRRGASIP-----------GEDV : :.. : : : *.:::***: Rv0199|M.tuberculosis_H37Rv KLPPFATRTDSVLLVATSVSENAGAK-PQTVHWNLRLDVSDVDGKLMISR Mb0205|M.bovis_AF2122/97 KLPPFATRTDSVLLVATSVSENAGAK-PQTVHWNLRLDVSDVDGKLMISR MAV_4976|M.avium_104 KLPPFATRTDSVLLVATSVSENVGAK-PQTVHWSLRLDVSDVDGKLMISG MMAR_0439|M.marinum_M KLPPFASRTDSVLLVATSVAENAGVK-PQTVHWSLRVEVSDVDGKLLVSG MUL_1089|M.ulcerans_Agy99 KLPPFASRTDSVLLVATSVAENAGVK-PQTVHWSLRVEVSDVDGKLLVSG MLBr_02614|M.leprae_Br4923 KLLPPAARTDSVMLVATSVSENVGGK-PTTVHWSLRLDVSDVDGKLMISH Mflv_0470|M.gilvum_PYR-GCK DLTGFSSRTDTVMVIATSLSENSGTEAPQTVRWTLRLDVTDVDGELKVSR Mvan_0185|M.vanbaalenii_PYR-1 GIEGFASRTDTVMVVATSLSENAGTDEPRTVRWTLRLDVTDVDGRLAVSR MSMEG_0235|M.smegmatis_MC2_155 ELTGMVSRIDTVLVVATSVTETAGSDKPRTVRWNLRLDVADVDGQLMISR TH_2958|M.thermoresistible__bu ELEEAASRTDTVIVVATSMTENVGDTPPQTVRWNLRLDVTDVDGRKLISR MAB_4535c|M.abscessus_ATCC_199 GLP-AVERIDRVMVVATSVTRDVNAA-PKVNQWHMRLAVSKVGDQLSITG : * * *:::***::. . * . :* :*: *:.*... :: Rv0199|M.tuberculosis_H37Rv LESIR Mb0205|M.bovis_AF2122/97 LESIR MAV_4976|M.avium_104 LSSIR MMAR_0439|M.marinum_M LASIR MUL_1089|M.ulcerans_Agy99 LASIR MLBr_02614|M.leprae_Br4923 LESIR Mflv_0470|M.gilvum_PYR-GCK LESVR Mvan_0185|M.vanbaalenii_PYR-1 LEPIR MSMEG_0235|M.smegmatis_MC2_155 LEPIR TH_2958|M.thermoresistible__bu LETIR MAB_4535c|M.abscessus_ATCC_199 LELLR * :*