For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MPDDEQLSDPEPRPEPRRDGVFSAYGIASAVLGVVAVAAAVLALVVWTGHRDEADELRYRTQVLQTAADW TGVLINMNSDTVDADMAKLHDGTVGQLNADFETAVEPYRKLVQTLRSSTTGQIDSVAIETIHHADPGSPP QEEGIEGFASRTDTVMVVATSLSENAGTDEPRTVRWTLRLDVTDVDGRLAVSRLEPIR
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_0185 | - | - | 100% (198) | hypothetical protein Mvan_0185 |
| M. vanbaalenii PYR-1 | Mvan_4598 | - | 5e-09 | 22.96% (196) | hypothetical protein Mvan_4598 |
| M. vanbaalenii PYR-1 | Mvan_4132 | - | 1e-08 | 27.00% (200) | hypothetical protein Mvan_4132 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0205 | - | 5e-55 | 49.55% (220) | hypothetical protein Mb0205 |
| M. gilvum PYR-GCK | Mflv_0470 | - | 1e-78 | 70.59% (204) | hypothetical protein Mflv_0470 |
| M. tuberculosis H37Rv | Rv0199 | - | 5e-55 | 49.55% (220) | hypothetical protein Rv0199 |
| M. leprae Br4923 | MLBr_02614 | - | 1e-52 | 50.70% (213) | hypothetical protein MLBr_02614 |
| M. abscessus ATCC 19977 | MAB_4535c | - | 2e-29 | 39.33% (178) | hypothetical protein MAB_4535c |
| M. marinum M | MMAR_0439 | - | 1e-53 | 50.50% (202) | hypothetical protein MMAR_0439 |
| M. avium 104 | MAV_4976 | - | 2e-58 | 54.46% (202) | hypothetical protein MAV_4976 |
| M. smegmatis MC2 155 | MSMEG_0235 | - | 5e-67 | 60.19% (206) | hypothetical protein MSMEG_0235 |
| M. thermoresistible (build 8) | TH_2958 | - | 1e-57 | 54.85% (206) | PUTATIVE conserved hypothetical protein |
| M. ulcerans Agy99 | MUL_1089 | - | 1e-53 | 50.50% (202) | hypothetical protein MUL_1089 |
CLUSTAL 2.0.9 multiple sequence alignment
Mb0205|M.bovis_AF2122/97 -------------------------------MPDGEQSQPPAQEDAE-DD
Rv0199|M.tuberculosis_H37Rv -------------------------------MPDGEQSQPPAQEDAE-DD
MAV_4976|M.avium_104 -------------------------------MSDGERTEPPAEQDSD-AD
MMAR_0439|M.marinum_M -------------------------------MPDDAAADTAKDSDPDSAD
MUL_1089|M.ulcerans_Agy99 -------------------------------MPDDAAADTAKDSDPDSAD
MLBr_02614|M.leprae_Br4923 ---------------------------MNWPKTPGTLAAMPDEEQTELPV
Mvan_0185|M.vanbaalenii_PYR-1 -------------------------------MPDD------------EQL
Mflv_0470|M.gilvum_PYR-GCK -------------------------------MPDD------------EQP
MSMEG_0235|M.smegmatis_MC2_155 -------------------------------MPDA------------PSK
TH_2958|M.thermoresistible__bu MTEQIVLGAHRGVDETQVDAGSNRFNRHSHMLPEAGKCPGNLTAMSDEAT
MAB_4535c|M.abscessus_ATCC_199 -----------------------------------------------MSK
Mb0205|M.bovis_AF2122/97 SRPDAAEAAAAEPKSSAGPMFSTYGIASTLLGVLSVAAVVLGAMIWSAHR
Rv0199|M.tuberculosis_H37Rv SRPDAAEAAAAEPKSSAGPMFSTYGIASTLLGVLSVAAVVLGAMIWSAHR
MAV_4976|M.avium_104 EPPEAAD----------GRIFSHYGVASTVLGVLSVAAVVLAALIWSDHR
MMAR_0439|M.marinum_M SAPAATEG-----ESSGEGMFSSYGVGSAFLGVLSVAAVVLGVLIWIGHR
MUL_1089|M.ulcerans_Agy99 SAPVATEG-----ESSGEGMFSSYGVGSAFLGVLSVAAVVLGVLIWIGHR
MLBr_02614|M.leprae_Br4923 HKEFAGIADYSDPGLSDGSVFSQYGIASTVLAVLSAAAVVFGVVIWRAHH
Mvan_0185|M.vanbaalenii_PYR-1 SDPEP------RPEPRRDGVFSAYGIASAVLGVVAVAAAVLALVVWTGHR
Mflv_0470|M.gilvum_PYR-GCK SDPAPGGGV--SGVSGVSGVFSGYGVASAVAGVVAVVAVVLAGLFWSGHR
MSMEG_0235|M.smegmatis_MC2_155 DAPEREPE---TDPGATGGIFSSYGVASAVLGVIAIAAVVLGTMIFTAHR
TH_2958|M.thermoresistible__bu AEPAPEQP---EDDREEDRVLSGFGIASTLLALIAVGAVVLGVMIWSGHT
MAB_4535c|M.abscessus_ATCC_199 DASASEN----------GPVFSRYGVLSAVLGVITVVALVLSVLITTGHR
::* :*: *:. .::: * *:. :. *
Mb0205|M.bovis_AF2122/97 DDSGERTYLTRVMLTAAEWTAVLINMNADNIDASLQRLHDGTVGQLNTDF
Rv0199|M.tuberculosis_H37Rv DDSGERTYLTRVMLTAAEWTAVLINMNADNIDASLQRLHDGTVGQLNTDF
MAV_4976|M.avium_104 DQVAERSYLSRVMRTAADWANVLINMNSGNVDASLQRLHDGTVGELNTDF
MMAR_0439|M.marinum_M DEISERVYLTRVMQAAAEWTDVLINMNAGNIDSSLQQLHDGTVGQLNTDF
MUL_1089|M.ulcerans_Agy99 DEISERVYLTRVMQAAAEWTDVLINMNAGNIDSSLQQLHDGTVGQLNTDF
MLBr_02614|M.leprae_Br4923 DNSAERAYLTHVMQTAFDWTGVLINMNTSNVDASLQRLHAGTVGELNTDF
Mvan_0185|M.vanbaalenii_PYR-1 DEADELRYRTQVLQTAADWTGVLINMNSDTVDADMAKLHDGTVGQLNADF
Mflv_0470|M.gilvum_PYR-GCK ADTDELRYRTQVLQTAADWTGILINLNKDTIEADMARLHDGTVGRLNADF
MSMEG_0235|M.smegmatis_MC2_155 DEISERDYQTRVLQAAAEWTNVLINMTAETVDADMQKLHEGTVGQLNNDF
TH_2958|M.thermoresistible__bu TEADERRHQTEALAAAADWTTVLVNMNTDNVETSLRQLQEGTVGALNADF
MAB_4535c|M.abscessus_ATCC_199 SQVARDRYDARVLDTAVTWVNTLINMKKSNLDSSVQTLQDGTAGQLSDHL
: . : :..: :* *. *:*:. .:::.: *: **.* *. .:
Mb0205|M.bovis_AF2122/97 DAVVQPYRQVVEKLRTHSSGRIEAVAIDTVHRELD---TQSGAARPVVTT
Rv0199|M.tuberculosis_H37Rv DAVVQPYRQVVEKLRTHSSGRIEAVAIDTVHRELD---TQSGAARPVVTT
MAV_4976|M.avium_104 DAAVQPYRAVVEKLQSKSSGRVDAVAIETVHHDLD---AQPGAARPPVTT
MMAR_0439|M.marinum_M DAAVQPYRQVVEKLQTHSSGRIEAVAIETVHRDLD---TRPGTARPVVTT
MUL_1089|M.ulcerans_Agy99 DAAVQPYRQVVEKLQTHSSGRIEAVAIETVHRDLD---TRPGTARPVVTT
MLBr_02614|M.leprae_Br4923 DAAVQPYRKVVEKLQTQSRGQIEAVAIESVHHDLD---TQPGVAHPVVTT
Mvan_0185|M.vanbaalenii_PYR-1 ETAVEPYRKLVQTLRSSTTGQIDSVAIETIHHADP---GSP-----PQEE
Mflv_0470|M.gilvum_PYR-GCK ESSMEPFRTLVQTLKSSTTGQVDSVAIETIHHDDP---DEPA---APPAT
MSMEG_0235|M.smegmatis_MC2_155 DSAVQPYRELVQRLQSRTTGQLDSVAIESLYHPQP---GPDGRVQQPERA
TH_2958|M.thermoresistible__bu EAAMQPYTQLVQKLRSRTRGQVESVAIESVHRQLPPLPGAPPPRQREPQP
MAB_4535c|M.abscessus_ATCC_199 GELIAGVVKLARTVDADAAGEIDSVAIDRRGASIP-----------GEDV
: :.. : : : *.:::***:
Mb0205|M.bovis_AF2122/97 KLPPFATRTDSVLLVATSVSENAGAK-PQTVHWNLRLDVSDVDGKLMISR
Rv0199|M.tuberculosis_H37Rv KLPPFATRTDSVLLVATSVSENAGAK-PQTVHWNLRLDVSDVDGKLMISR
MAV_4976|M.avium_104 KLPPFATRTDSVLLVATSVSENVGAK-PQTVHWSLRLDVSDVDGKLMISG
MMAR_0439|M.marinum_M KLPPFASRTDSVLLVATSVAENAGVK-PQTVHWSLRVEVSDVDGKLLVSG
MUL_1089|M.ulcerans_Agy99 KLPPFASRTDSVLLVATSVAENAGVK-PQTVHWSLRVEVSDVDGKLLVSG
MLBr_02614|M.leprae_Br4923 KLLPPAARTDSVMLVATSVSENVGGK-PTTVHWSLRLDVSDVDGKLMISH
Mvan_0185|M.vanbaalenii_PYR-1 GIEGFASRTDTVMVVATSLSENAGTDEPRTVRWTLRLDVTDVDGRLAVSR
Mflv_0470|M.gilvum_PYR-GCK DLTGFSSRTDTVMVIATSLSENSGTEAPQTVRWTLRLDVTDVDGELKVSR
MSMEG_0235|M.smegmatis_MC2_155 ELTGMVSRIDTVLVVATSVTETAGSDKPRTVRWNLRLDVADVDGQLMISR
TH_2958|M.thermoresistible__bu ELEEAASRTDTVIVVATSMTENVGDTPPQTVRWNLRLDVTDVDGRKLISR
MAB_4535c|M.abscessus_ATCC_199 GLP-AVERIDRVMVVATSVTRDVNAA-PKVNQWHMRLAVSKVGDQLSITG
: * * *:::***::. . * . :* :*: *:.*... ::
Mb0205|M.bovis_AF2122/97 LESIR
Rv0199|M.tuberculosis_H37Rv LESIR
MAV_4976|M.avium_104 LSSIR
MMAR_0439|M.marinum_M LASIR
MUL_1089|M.ulcerans_Agy99 LASIR
MLBr_02614|M.leprae_Br4923 LESIR
Mvan_0185|M.vanbaalenii_PYR-1 LEPIR
Mflv_0470|M.gilvum_PYR-GCK LESVR
MSMEG_0235|M.smegmatis_MC2_155 LEPIR
TH_2958|M.thermoresistible__bu LETIR
MAB_4535c|M.abscessus_ATCC_199 LELLR
* :*