For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MADAARVIDELRAESDDLDALVAALPAARWTLPTPAPGWTIAHQIGHLMWTDRVALLSVTDEAGFAAVLA QASENPGGFVDAAAEELALTSPGELLADWRATRAALHDALSTVADGRKLPWFGPPMSAASMATARLMETW AHGLDVADALGVTRAPTARLRSIAHIGVRTRDFAFTVHGLTPPPEPFHVKLSAPHGAQWTWGPEDAAQRV TGSAEHFCMLATQRRPRAALDVVAVGPDAEKWLTIAQAFAGPPGPGRG
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_6059 | - | - | 100% (258) | hypothetical protein Mvan_6059 |
M. vanbaalenii PYR-1 | Mvan_0343 | - | 7e-54 | 44.58% (249) | hypothetical protein Mvan_0343 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0037c | - | 1e-108 | 73.54% (257) | hypothetical protein Mb0037c |
M. gilvum PYR-GCK | Mflv_0848 | - | 1e-116 | 78.99% (257) | wyosine base formation |
M. tuberculosis H37Rv | Rv0036c | - | 1e-108 | 73.54% (257) | hypothetical protein Rv0036c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_4930 | - | 1e-99 | 69.41% (255) | hypothetical protein MAB_4930 |
M. marinum M | MMAR_0051 | - | 1e-103 | 70.43% (257) | hypothetical protein MMAR_0051 |
M. avium 104 | MAV_0050 | - | 1e-108 | 73.15% (257) | hypothetical protein MAV_0050 |
M. smegmatis MC2 155 | MSMEG_6923 | - | 1e-106 | 72.16% (255) | hypothetical protein MSMEG_6923 |
M. thermoresistible (build 8) | TH_2156 | - | 1e-08 | 25.81% (155) | CONSERVED HYPOTHETICAL PROTEIN |
M. ulcerans Agy99 | MUL_0050 | - | 1e-103 | 70.04% (257) | hypothetical protein MUL_0050 |
CLUSTAL 2.0.9 multiple sequence alignment Mvan_6059|M.vanbaalenii_PYR-1 ----MADAARVIDELRAESDDLDALVAALPAARWTLPTPAPGWTIAHQIG Mflv_0848|M.gilvum_PYR-GCK -MSRMAAAAPLIAELRAESDELDALVADLTPQQWTLSTPAPGWTIAHQIA Mb0037c|M.bovis_AF2122/97 ----MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIG Rv0036c|M.tuberculosis_H37Rv ----MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIG MMAR_0051|M.marinum_M ----MAGPGPIVADLEAESDDLDALVAPLPPQRWSELTPAPGWSIAHQIA MUL_0050|M.ulcerans_Agy99 ----MAGPGPIVADLEAENDDLDALVAPLAPQRWSELTPAPGWTIAHQIA MAV_0050|M.avium_104 ----MTGPAPIVADLRAESDALDALVAPLPPGRWADPTPAAGWTIAHQIG MSMEG_6923|M.smegmatis_MC2_155 -----MAAEPIVADLRAESDALDALVADLPEAAWATDTPAQGWTIAHQIG MAB_4930|M.abscessus_ATCC_1997 ---MTSTADAVIDDLRAESDELDALVAALPEQGWARDTPAAGWTIAHQIA TH_2156|M.thermoresistible__bu VSITALDKTEILDGLFAVWDDITALGGRLTDAQWQTPTELPGWSVHDVLA .: * * * : ** . *. * * **:: . :. Mvan_6059|M.vanbaalenii_PYR-1 HLMWTDRVALLSVTDEAGFAAVLAQASENPGGFVDA-AAEELALTSPGEL Mflv_0848|M.gilvum_PYR-GCK HLLWTDRVAVLAVTDEARFADVVAASAHDS-AFVDT-AAAELAVLPPAEL Mb0037c|M.bovis_AF2122/97 HLLWTDRVALTAVTDEAGFAELMTAAAANPAGFVDD-AATELAAVSPAEL Rv0036c|M.tuberculosis_H37Rv HLLWTDRVALTAVTDEAGFAELMTAAAANPAGFVDD-AATELAAVSPAEL MMAR_0051|M.marinum_M HLLWTDRVALTAVTDEAGFADVLTAAAANPAGFVDE-GAEELAALPPAEL MUL_0050|M.ulcerans_Agy99 HLLWTDRVALTAVTDEAGFADVLTAAAANPAGFVDE-GAEELAAMPPAEL MAV_0050|M.avium_104 HLLWTDRVALIAVTDEPGFAEVLAGAAADPAGFVDK-GAEELAAVAPAEL MSMEG_6923|M.smegmatis_MC2_155 HLLWTDQMALLAVTDEAGFAEAVARAATHPTGFVDE-GAAALAALPASQL MAB_4930|M.abscessus_ATCC_1997 HLHWTDAQSLLAVTDPAVFAEELPKAMADPLGFVDK-AAEETAQIPPADL TH_2156|M.thermoresistible__bu HLIGIESMLQGVETPDADIDVTTLEHVHNDIGALNERWIRALRGLEPAEL ** : * . : . . :: ..:* Mvan_6059|M.vanbaalenii_PYR-1 LADWRATRAALHDALSTVADGRKLPWFGPPMSAASMA---TARLMETWAH Mflv_0848|M.gilvum_PYR-GCK LADWRTTRAALHDALLAVTDGRKLPWFGPPMSAASMA---TARLMETWAH Mb0037c|M.bovis_AF2122/97 LTDWRVTRGRLHEELLAVPDGRKLAWFGPPMSAASMA---TARLMETWAH Rv0036c|M.tuberculosis_H37Rv LTDWRVTRGRLHEELLAVPDGRKLAWFGPPMSAASMA---TARLMETWAH MMAR_0051|M.marinum_M LSDWRLTRGRLHEALLNVADGRKLPWFGPPMSAASMA---TARLMETWAH MUL_0050|M.ulcerans_Agy99 LSDWRLTRGRLHEALLNVADGRKLPWFGPPMSAASMA---TARLMETWAH MAV_0050|M.avium_104 LADWRATRDRLHRALLGVPAGRKLPWFGPPMSAASMA---TARLMETWAH MSMEG_6923|M.smegmatis_MC2_155 LAEWRTTRNRLHDALLGVADGRKLPWFGPPMAAGSMA---TARLMETWAH MAB_4930|M.abscessus_ATCC_1997 LIQWRSTRNQLHAALRAVPDGVKIPWYGPPMSAASMG---TARLMETWAH TH_2156|M.thermoresistible__bu LDRWRSVTDERRAALTAMNDEDWSAVTATPAGPDSYGRFMRIRIFDCWMH * ** . : * : . ..* .. * . *::: * * Mvan_6059|M.vanbaalenii_PYR-1 GLDVADALGVTRAPTARLRSIAHIGVRTRDFAF----TVHGLTPPPEPFH Mflv_0848|M.gilvum_PYR-GCK GLDVADTLGTVRIPTSRLRSIAHIGVRTRDFAF----AVHGLTPPPEPFH Mb0037c|M.bovis_AF2122/97 GLDVADALGVIRPATQRLRSIAHLGVRTRDYAF----IVNNLTPPAEPFL Rv0036c|M.tuberculosis_H37Rv GLDVADALGVIRPATQRLRSIAHLGVRTRDYAF----IVNNLTPPAEPFL MMAR_0051|M.marinum_M GLDVADALGVTRPATDRLRSIAHLGVRTRDYAY----FVNNLAPPTEQFL MUL_0050|M.ulcerans_Agy99 GLDVADALGVTRPATDRLRSIAHLGVRTRDYAY----FVNNLAPPTEQFL MAV_0050|M.avium_104 GLDVADALGVTRPATDRLRSIAHLGVRTRDYAF----AVNNLTPPAEPFL MSMEG_6923|M.smegmatis_MC2_155 GLDVADALGVRRPATDRLRSVAHIGVRTRDFAF----SVHGLTPPAEPFR MAB_4930|M.abscessus_ATCC_1997 GLDVADALGVPLAPTPRIKSIAHLGVRTRDFAF----SVHGLPAPSEPFR TH_2156|M.thermoresistible__bu EHDIRAVTGLTLGDDALDTPPARLALDEMAAAMGRVVGKLGKAPDGSRVR *: . * . *::.: * . .. . . Mvan_6059|M.vanbaalenii_PYR-1 VKLSAPHGAQWTWGPEDAAQRVTG-----SAEHFCMLATQRRPRAALDVV Mflv_0848|M.gilvum_PYR-GCK VKLRAPDGSTWSWGTEDADQRVEG-----SAEHFCMLVTQRRPPAALDVV Mb0037c|M.bovis_AF2122/97 VELRGPSGDTWSWGPSDAAQRVTG-----SAEDFCFLVTQRRALSTLDVN Rv0036c|M.tuberculosis_H37Rv VELRGPSGDTWSWGPSDAAQRVTG-----SAEDFCFLVTQRRALSTLDVN MMAR_0051|M.marinum_M VELRGPGGDIWSWGPADAAQRVTG-----PAEDFCFLVTQRRPLSSLHLT MUL_0050|M.ulcerans_Agy99 VELRGPGGDLWSWGPADAAQRVTG-----PAEDFCFLVTQRRPLSSLHLT MAV_0050|M.avium_104 VELRGPRGDTWSWGPPEAAQRVTG-----SAEDFCFLVTQRRPLSALDIT MSMEG_6923|M.smegmatis_MC2_155 VELTGPSGELWVWGPEDAAQRVTG-----VAEDFCMLVTQRRAPSQLDVH MAB_4930|M.abscessus_ATCC_1997 VELTGPDADTWTWGPEEAAQRVTG-----SALDFCYLVTQRRPRADLDLR TH_2156|M.thermoresistible__bu FELLGPLARTIDVAVQDGRGRVVPGFGATGDGDPGPTTVISLDAWVFTRL .:* .* . . :. ** . .. : Mvan_6059|M.vanbaalenii_PYR-1 AVGPDAEKWLTIAQAFAGPPGPGRG--------- Mflv_0848|M.gilvum_PYR-GCK ATGPDAQRWLTIAQAFAGPPGAGRD--------- Mb0037c|M.bovis_AF2122/97 AVGEDAQRWLTIAQAFAGPPGRGR---------- Rv0036c|M.tuberculosis_H37Rv AVGEDAQRWLTIAQAFAGPPGRGR---------- MMAR_0051|M.marinum_M ATGEDARQWLQIAQAFAGPPGEGR---------- MUL_0050|M.ulcerans_Agy99 ATGEDARQWLQIAQAFAGPPGEGR---------- MAV_0050|M.avium_104 ADGADAQRWLEIAQAFAGPPGPGR---------- MSMEG_6923|M.smegmatis_MC2_155 ATGPDAQTWLTIAQAFAGPPGAGRG--------- MAB_4930|M.abscessus_ATCC_1997 ATGQDAEQWLSIAQAFAGPPGAGRG--------- TH_2156|M.thermoresistible__bu AGGRSTPERHPGAIGYRGDEAVGRRIVENLNYVI * * .: * .: * . **