For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VTGQVRLGRATLSRVVEVRAQMRTSLFAQTPAAAWPANADLLEPLFWDRGADEWKIAIQTWVIRVDGLTV LVDTGVGNHRNRPHMPPLHQLDTPYLKALTDAGVSPEDVDVVVNTHLHTDHVGWNTRLSAASGAGTGGGA WTPTFPNARYLMPELDYRHFSPDNPDVADGMRIVFADSVSPVEPQMELFSGDHRVSDSLWLRPAPGHTPG STMVWLDAGVPAVFVGDLTHSPIQIPRPDDPCAFDVDPMAAARSRHRILTEASRRRAAVIPAHYPGRGGA TVVARGNTFLVDQWLGFPEI
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_5633 | - | - | 100% (300) | beta-lactamase domain-containing protein |
M. vanbaalenii PYR-1 | Mvan_2949 | - | 8e-15 | 26.98% (252) | beta-lactamase domain-containing protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_4947 | - | 4e-33 | 37.10% (248) | Beta-lactamase-like protein |
M. marinum M | - | - | - | - | - |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | MSMEG_3376 | - | 3e-97 | 57.84% (306) | beta-lactamase |
M. thermoresistible (build 8) | TH_2871 | - | 3e-57 | 40.40% (302) | PUTATIVE beta-lactamase domain protein |
M. ulcerans Agy99 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment Mvan_5633|M.vanbaalenii_PYR-1 ----MTGQVRLGRATLSRVVEVRAQMR--TSLFAQTPAAAWPANADLLEP MSMEG_3376|M.smegmatis_MC2_155 ----MADRTQLGAATISRVVEWRLDLP--LTMFPRTPHDVWQELASELSP TH_2871|M.thermoresistible__bu ----MIKTIEIGAVTVTRVMEWEGLFAPGTELIPDSDDRFWESERALLAP MAB_4947|M.abscessus_ATCC_1997 MFSAAVRTFTVGDATVTQLTELDVWPIKPHHWYPALSEEQLVFARANYAP :* .*:::: * . * Mvan_5633|M.vanbaalenii_PYR-1 LFWDRGADEWKIAIQTWVIRVDGLTVLVDTGVGNHRNRPHMPPLHQLDTP MSMEG_3376|M.smegmatis_MC2_155 TFWN--SDKWHALVQTWVIEVDGLTVLVDTGVGNGRDRPAMPFLAGLDTD TH_2871|M.thermoresistible__bu DHWEPADRMVRACLQTFVLQSEGRTILVDTGAGNHKERPYLPVFGHLETD MAB_4947|M.abscessus_ATCC_1997 SAVSDDGSELIFAIHNYVIELADTIIVVDTCSGNHKNRPLFADLHMLNTD . ::.:*:. . ::*** ** ::** :. : *:* Mvan_5633|M.vanbaalenii_PYR-1 YLKALTDAGVSPEDVDVVVNTHLHTDHVGWNTRLSAASGAGTGGGAWTPT MSMEG_3376|M.smegmatis_MC2_155 FLEALEAAGVSPASVDIVVNTHVHTDHVGWNTRRENDR--------WVPT TH_2871|M.thermoresistible__bu FLDRLAAAGFRPEDIDLVINTHVHVDHVGWNTYLHDRE--------WVPT MAB_4947|M.abscessus_ATCC_1997 YLTRLEQSGYSPEAVDIVVNTHLHLDHCGWNTRLVEGT--------WRPT :* * :* * :*:*:***:* ** **** * ** Mvan_5633|M.vanbaalenii_PYR-1 FPNARYLMPELDYRHFSPDNPDVA------------DGMRIVFADSVSPV MSMEG_3376|M.smegmatis_MC2_155 FPNARYLVPEADYRYYHPENADARGPGRDEEHQARLDASRILFSDSILPV TH_2871|M.thermoresistible__bu FPNARYVFSRRDFDFWNPLNGHER---------RGALVNQNMFEDSVLPV MAB_4947|M.abscessus_ATCC_1997 FPAATYLFHHTELKYIRAQWESAP-------IDQWQDNGGWVYEDSILPV ** * *:. . : . . :: **: ** Mvan_5633|M.vanbaalenii_PYR-1 EP--QMELFSGD-HRVSDS---LWLRPAPGHTPGSTMVWLDA-GVPAVFV MSMEG_3376|M.smegmatis_MC2_155 DEAGQIQLWSDD-YQISES---LRLRPAPGHTPGSSVLWLDA-GRPAVFV TH_2871|M.thermoresistible__bu QQAGLADMWEGDTHRIDAN---LTLELAPGHTPGLSVLKLESEGERAVFV MAB_4947|M.abscessus_ATCC_1997 LEHAPYGFVKSGQVLHSYGSTHIRALDAGGHTPGHVAIEVRAADTGLLIA : ... . . : * ***** : : : . ::. Mvan_5633|M.vanbaalenii_PYR-1 GDLTHSPIQIPRPDDPCAFDVDPMAAARSRHRILTEASRRRAAVIPAHYP MSMEG_3376|M.smegmatis_MC2_155 GDLTHSPMQIHHPTDSCVLDEDFDQAAVTRRRVLTEASRRRAAVIPAHYP TH_2871|M.thermoresistible__bu GDLLHSPVQILRPDWNSCFCEDPGRARASRRRVLSWAADNNALLVPAHLG MAB_4947|M.abscessus_ATCC_1997 GDALHHPMQAQFPDLPFYADADPAQAVATRRALLGRCADENLKLLTAHFP ** * *:* * * * :*: :* .: .. ::.** Mvan_5633|M.vanbaalenii_PYR-1 GRGGATVVARGNTFLVDQWLGFPEI--- MSMEG_3376|M.smegmatis_MC2_155 GHGGATVVARGDAFMIDGWLNVDAL--- TH_2871|M.thermoresistible__bu GDHAAEVVRAGDDFAVKGWAAFRSAGAV MAB_4947|M.abscessus_ATCC_1997 AHSPLGVRRSGAAFTWDGSRAID----- . * * * . .