For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTVPVNAPIDMAVYRTGVRALSDQPLDWSFKGIPARWWGRTPAQIVAQRPELFGAGAIGPVCVLRDEALT HNLQTMAGWCRDRGVELAPHGKTHMSPQLAARQLAAGACAVTVATIGQAAVYRAFGVRSLVLANELVDGA GLRWLAAELDRDPGLRFVCWVDSVRGVELMSDALAGARRRVDVCVEVGMPHGRTGCRSEADTDEVARAVV NSPRLRLVGVAGYEAALSQTLTAEAVAAVTAHLAQLRATVIRLSALFETDDVLVTAGGSTYFDDVAEALT GWPSGLSGLSVRTVLRSGCYLTHDHGLYANTSPLTRGGRTGLRPALEVHAQVVSRPEPDLAILTMGRRDV PFDQGLPVALAPAAGTVTKLNDQHAYLELGPGGAAGVGQWLRFGISHPCTLFDKWRLLPVLDADDRVVDL IRTFF
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_5361 | - | - | 100% (425) | hypothetical protein Mvan_5361 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_1427 | - | 1e-176 | 72.77% (426) | hypothetical protein Mflv_1427 |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_1253c | - | 4e-16 | 26.21% (351) | hypothetical protein MAB_1253c |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_6095 | - | 1e-151 | 64.10% (429) | D-amino acid deaminase |
| M. thermoresistible (build 8) | TH_3444 | - | 8e-05 | 23.70% (173) | PUTATIVE short-chain dehydrogenase/reductase SDR |
| M. ulcerans Agy99 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment
Mvan_5361|M.vanbaalenii_PYR-1 MTVPVNAPIDMAVYRTGVRALSDQPLDWSFKGIPARWWGRTPAQIVAQRP
Mflv_1427|M.gilvum_PYR-GCK MTAPGIAPIDDAVFDAAVRDLHDRPLDWRFKGVPADWWGRTEAQIIAAGS
MSMEG_6095|M.smegmatis_MC2_155 MNAPRNAPR--------LAALADAPVDWRFKGLPASWAGRTPADIVGARV
MAB_1253c|M.abscessus_ATCC_199 --------------------MSDTTAHSGLDGLDT---------------
TH_3444|M.thermoresistible__bu ------------------MQLGMIGAGRMGSGLVRRLTAR----------
: .*:
Mvan_5361|M.vanbaalenii_PYR-1 ELFGAGA-IGPVCVLRDEALTHNLQTMAGWCRDRGVELAPHGKTHMSPQL
Mflv_1427|M.gilvum_PYR-GCK AVPVGVG-AGPHCVLRADALTHNLHTMARWCAARGMELAPHGKTHMSPQL
MSMEG_6095|M.smegmatis_MC2_155 GLFDGDGPLGPVCVLSESAVAHNLATMARWCAERGVELAPHGKTHMAPQL
MAB_1253c|M.abscessus_ATCC_199 ----------PFLAVDLAVMDRNIERLAGRLRGTGIRLRPHAKSHKCIEI
TH_3444|M.thermoresistible__bu ----------EHSCVVYDPDPAAVGRLPDTHVSRAESFAELVQALAIPRI
: : :. . : :: .:
Mvan_5361|M.vanbaalenii_PYR-1 AARQLAAGACAVTVATIGQAAVYRAFGVRSLVLANELVDGAGLRWLAAEL
Mflv_1427|M.gilvum_PYR-GCK AERQLAGGACAITVATVAQAAVYRAFGVRSLLLANELVDAAGLRWVSAEL
MSMEG_6095|M.smegmatis_MC2_155 LARQFEAGACAVTAATVSQVRVFRAFGFDRFVIANEVTDPAGLAWLAHEL
MAB_1253c|M.abscessus_ATCC_199 ARRQIDSGAIGLTVATVGEAEVFAEAGFIDLFIAYPLWVTAQKARRLRQV
TH_3444|M.thermoresistible__bu VWVMVPAARTGEVIAELEGLMEFDDVIVDGGNSYYRDAIARSRRLASRGI
. .. . . * : : . :
Mvan_5361|M.vanbaalenii_PYR-1 DRDPGLRFVCWVDSVRGVELMSDAL--AGARRRVDVCVEVGMPHGRTGCR
Mflv_1427|M.gilvum_PYR-GCK DRDPDLRFVCWVDSVRGVELMTAAL--DGARRPIDVCVEVGIPGGRFGCR
MSMEG_6095|M.smegmatis_MC2_155 DADPGFGVVCWVDSVAGAELMTAALRRSGARRRLDVCVEVGMDGGRTGCR
MAB_1253c|M.abscessus_ATCC_199 ASRAALRVA--VDSAAGAQQLAEHLG------DLPITVVIEVDSGHHRTG
TH_3444|M.thermoresistible__bu HYLDVGTSGGVHGADRGFCLMIGGES--RIVERLEPIFRALAPGADTATR
.: * : : . .
Mvan_5361|M.vanbaalenii_PYR-1 SEADTDEVARAVVNSPRLRLVGVAGYEAALSQTLTAEAVAAVTAHLAQLR
Mflv_1427|M.gilvum_PYR-GCK TAEAADDVARAAAASPRLRLVGVAGYEAAVAQSLDDDALAVVTAHLAEVR
MSMEG_6095|M.smegmatis_MC2_155 TTAEVDAVARAVVDSPRLRLVGVSGYEAATGQDVTQEAIDGVRAYLDGLR
MAB_1253c|M.abscessus_ATCC_199 VAPDQAGPVAAAARSAGLNVVGIFTFPGHGYTPGHRAEVAAQESHALDTA
TH_3444|M.thermoresistible__bu TPGRTGGITPAEHGYLHCGPAGSGHFVKMVHNGVEYGQMAALAEGMAILR
. * .* : :
Mvan_5361|M.vanbaalenii_PYR-1 ATVIRLSALFETDDVLVTAGGSTYFDDVAEALT-GWPSGLSGLSVRTVLR
Mflv_1427|M.gilvum_PYR-GCK ATVIRLAALFEDDDVVVTAGGSTYFDAVADALS-DWPG---GARVRPILR
MSMEG_6095|M.smegmatis_MC2_155 AAVLRLTAQFETDEVIVTAGGSTYFDHVADVLTGDWPT---GSRVRTILR
MAB_1253c|M.abscessus_ATCC_199 AASLRAQGIDPS----VRSGGSTPTVGAADDTV------------LTEVR
TH_3444|M.thermoresistible__bu NADV----------------GAETRSVDAETAP--------------LAD
: : *: *:
Mvan_5361|M.vanbaalenii_PYR-1 SGCY-LTHDHGLYANTSPLTRGGRTGLRPALEVHAQVVSRPEPDLAILTM
Mflv_1427|M.gilvum_PYR-GCK SGCY-LAHDHGLYARTSPLTRGRPDGFRPALEIRAQVLSRPEPDLAIVGM
MSMEG_6095|M.smegmatis_MC2_155 SGCY-LTHDDGLYARTSPLS------LRAALRVWGQVVSRPEPRLALVAM
MAB_1253c|M.abscessus_ATCC_199 PGVYPFNDAQQLELDVCTLDDIALSAVTTVVHARGRTAVVDAG---SKIL
TH_3444|M.thermoresistible__bu ADCYTYDFD-----------------IADILEVWRRGSVVSSWLVDLTAA
.. * . :. :
Mvan_5361|M.vanbaalenii_PYR-1 GRRDVPFDQGLPVALAPAAGTVTKLNDQHAYLELGPGGAAGVGQWLRFGI
Mflv_1427|M.gilvum_PYR-GCK GRRDVSFDQGMPVPLDDAAGAVEKLNDQHAYLRVTSG-DVEVGDWLRFGI
MSMEG_6095|M.smegmatis_MC2_155 GRRDVSFDQGMPTPLGLPGGVVDKLNDQHAFVRLGPHDTPAVGAWLEFGI
MAB_1253c|M.abscessus_ATCC_199 GADRPGWATGFGRVIDEPDARIVALSEHHATIEF-PGAAPPPGTRLRVAP
TH_3444|M.thermoresistible__bu AVYANPQLDEFSAEVDDSG--EGRWAVQTAVDEGVPAPVLTAALYERFAS
. : : . : * . . . ...
Mvan_5361|M.vanbaalenii_PYR-1 SHPCTLFDKWRLLPVLDADDRVVDLIRTFF---
Mflv_1427|M.gilvum_PYR-GCK SHPCTTFDKWRLIPVLDADDRVVDLVHTFF---
MSMEG_6095|M.smegmatis_MC2_155 SHPCTTFDKWQLIPVLDDDGIVVDLVRTFF---
MAB_1253c|M.abscessus_ATCC_199 NHLCNAVNLVDSLVIDAADGVRHWAVAARGANT
TH_3444|M.thermoresistible__bu RGEADYSRKALSAMRHAFGGHRRKGAAR-----
. ..