For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MNLGRSLTDLAFAPVRAGLAIAEVGLGMASGAMDIAQRSLGDSGNGARQAPTSFASMLGVQDAVDRANRL ARLMDEDQPLGRALAPDGPIDRLLRPGGVVDRLTAPGGVLDRLTEEEGGLMRTLEPGGLVDQLLAEDGLV DRLLAEDGVADRLFAEGGVVDTLTARNGPLEQLAAVADTLNRLAPGLEALEPTIEALREAVIVLSQVVNP LSNIADRIPLPGRRMRPRPTSRPVTSQRIVEADD
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_5176 | - | - | 100% (244) | hypothetical protein Mvan_5176 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0779c | - | 3e-86 | 63.37% (243) | hypothetical protein Mb0779c |
M. gilvum PYR-GCK | Mflv_1580 | - | 1e-113 | 82.79% (244) | hypothetical protein Mflv_1580 |
M. tuberculosis H37Rv | Rv0756c | - | 3e-86 | 63.37% (243) | hypothetical protein Rv0756c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_0672c | - | 1e-50 | 43.82% (251) | hypothetical protein MAB_0672c |
M. marinum M | MMAR_4943 | - | 1e-86 | 63.93% (244) | hypothetical protein MMAR_4943 |
M. avium 104 | MAV_0700 | - | 1e-87 | 65.57% (244) | hypothetical protein MAV_0700 |
M. smegmatis MC2 155 | MSMEG_5873 | - | 1e-81 | 60.22% (274) | hypothetical protein MSMEG_5873 |
M. thermoresistible (build 8) | TH_1249 | - | 4e-95 | 72.54% (244) | HYPOTHETICAL PROTEIN Rv0756c |
M. ulcerans Agy99 | MUL_0462 | - | 7e-87 | 63.93% (244) | hypothetical protein MUL_0462 |
CLUSTAL 2.0.9 multiple sequence alignment Mvan_5176|M.vanbaalenii_PYR-1 MNLGRSLTDLAFAPVRAGLAIAEVGLGMASGAMDIAQRSLGDSGNG---- Mflv_1580|M.gilvum_PYR-GCK MNLAKSLTELAFAPMRAGLAVADAGIGVARSGIDIASRAMGDSAN----- TH_1249|M.thermoresistible__bu MNLGKSLMQVATAPVRIGLAVADAGLEVAAAGLGMAHRTLG----E---- Mb0779c|M.bovis_AF2122/97 MNLGQTLVGIATWPARAGLAAADTGLNMAGAAVDMAKQALGDAGG----- Rv0756c|M.tuberculosis_H37Rv MNLGQTLVGIATWPARAGLAAADTGLNMAGAAVDMAKQALGDAGG----- MMAR_4943|M.marinum_M MNVGQSLVAFATAPARAGLAAAEASLNLAGAAVGLAKQALGETST----- MUL_0462|M.ulcerans_Agy99 MNVGQSLVAFATAPARAGLAAAEASLNLAGAAVGLAKQALGETST----- MAV_0700|M.avium_104 MNLAKNIVSAATAPARAGLAAADAGLSVASAAVGVAKRALGDSG------ MSMEG_5873|M.smegmatis_MC2_155 MNLGKTLVQVATAPVRIGIAIADAGLGIAGETLTAVQRTVTDSNP----- MAB_0672c|M.abscessus_ATCC_199 ----MKLVSLITAPLKISLAVADTGLAVASRAIDTGREILAALPDGRPAD .: * : .:* *:..: :* : . : Mvan_5176|M.vanbaalenii_PYR-1 ---------ARQAPTSFASMLGVQDAVDRANRLARLMDEDQPLGRALAPD Mflv_1580|M.gilvum_PYR-GCK ---------ATQTPTSFASMLGVQDAVERANRLAKLMDEDQPLGRALASG TH_1249|M.thermoresistible__bu ---------PTAGPSSVAGILGLEDTLERANRLAKLLDEDAPLGRALAPD Mb0779c|M.bovis_AF2122/97 ----------ASGSTSMANMLGIDDTIARANRLARLLDDDMPLGRAIAPN Rv0756c|M.tuberculosis_H37Rv ----------ASGSTSMANMLGIDDTIARANRLARLLDDDMPLGRAIAPN MMAR_4943|M.marinum_M ----------DAGNNAMASVLGIEDAIVRANRLAKLLDEDAPLGRAIAPN MUL_0462|M.ulcerans_Agy99 ----------DAGNNAMASVLGIEDAIVRANRLAKLLDEDAPLGRAIAPN MAV_0700|M.avium_104 ----------TAGTNAMTSMLGIDDAIVRANRLARLLDDDAPLGRAVAPD MSMEG_5873|M.smegmatis_MC2_155 ----------LTSRSSLAQMLGLDDAVERANRLARLMDDDAPLGRALAPD MAB_0672c|M.abscessus_ATCC_199 DQGDAPGAGLVSAVESLFGMAGRKSPLHSAMKVAELMEEDKPLGRALRAG :. : * ...: * ::*.*:::* *****: .. Mvan_5176|M.vanbaalenii_PYR-1 GPIDRLLRPGGVVDRLTAPGGVLDRLTEE--------------------- Mflv_1580|M.gilvum_PYR-GCK GPIDRLLQPGGVVDRLTAPGGALDRMTQD--------------------- TH_1249|M.thermoresistible__bu GPLDRLMRPGGVIDRLTAPGGVLDRLTDE--------------------- Mb0779c|M.bovis_AF2122/97 GPMDRMLRPGGVVDLLTQPGGLLDRLTAE--------------------- Rv0756c|M.tuberculosis_H37Rv GPMDRMLRPGGVVDLLTQPGGLLDRLTAE--------------------- MMAR_4943|M.marinum_M GPMDRMLRPGGVVDLLTAPGGLLDRVTAE--------------------- MUL_0462|M.ulcerans_Agy99 GPMDRMLRPGGVVDLLTAPGGLLDRVTAE--------------------- MAV_0700|M.avium_104 GPLDRLLRPGGVVDMLTSEGGLLDRLTAE--------------------- MSMEG_5873|M.smegmatis_MC2_155 GPVNRLLRPGGLVDQLTAEGGLLDRLTAENGPVTRAVAPGGLVDQITMEG MAB_0672c|M.abscessus_ATCC_199 GPVERIMAPGGLADRLTEPGGVLDRLFAK--------------------- **::*:: ***: * ** ** ***: . Mvan_5176|M.vanbaalenii_PYR-1 ---------EGGLMRTLEPGGLVDQLLAEDGLVDRLLAEDGVADRLFAEG Mflv_1580|M.gilvum_PYR-GCK ---------DGGLMRAIEPGGLVDQLLAEDGLVDRLLAEDGVADRLFAEG TH_1249|M.thermoresistible__bu ---------EGGLMRALEPGGLVDQLLAEDGLVERVLAEDGLADRLLAEG Mb0779c|M.bovis_AF2122/97 ---------GGAMQRALQPGGLADQLLAEDGLIERVLSEDGLADRLLAEG Rv0756c|M.tuberculosis_H37Rv ---------GGAMQRALQPGGLADQLLAEDGLIERVLSEDGLADRLLAEG MMAR_4943|M.marinum_M ---------GGAMHRALQPGGLADQLVAEDGLIERVLSEDGLADRLLSEG MUL_0462|M.ulcerans_Agy99 ---------GGAMHRALQPGGLADQLVAEDGLIERVLSEDGLADRLLSEG MAV_0700|M.avium_104 ---------GGALQRTLQPGGLADQLVAEDGLIERLLAEDGLADRLLAEG MSMEG_5873|M.smegmatis_MC2_155 GLLDRLTTDDGALSRVIAPGGLADQLLAHDGLIERVLREDGVADRLLAEG MAB_0672c|M.abscessus_ATCC_199 ---------DGPVDRLTAPDGAVDRALAPGGLVDQLLAEDGILERLMREE * : * *.* .*: :* .**::::* ***: :**: * Mvan_5176|M.vanbaalenii_PYR-1 GVVDTLTARNGPLEQLAAVADTLNRLAPGLEALEPTIEALREAVIVLSQV Mflv_1580|M.gilvum_PYR-GCK GVVDTLTARNGPLEQLAAVADTLNRLAPGLEALEPTIEALRDAVIVLSQV TH_1249|M.thermoresistible__bu GLIDRLTARDGPLEQLADVADTLNRLAPGLEALEPTIAALREAVITLSQV Mb0779c|M.bovis_AF2122/97 GLIDKITAKDGPLEQLADVADTLARLTPGMEALEPAIATLQDAVIALTMV Rv0756c|M.tuberculosis_H37Rv GLIDKITAKDGPLEQLADVADTLARLTPGMEALEPAIATLQDAVIALTMV MMAR_4943|M.marinum_M GLVDKLTAKNGPLEQLADVADTLARLAPGMEALEPAIETLQDAVVALTMV MUL_0462|M.ulcerans_Agy99 GLVDKLTAKNGPLEQLADVADTLARLAPGMEALEPAIETLQDAVVALTMV MAV_0700|M.avium_104 GLIDKLTAKHGPLDQLADVADTLARLTPGMEALEPAIATLQDAVVALTMV MSMEG_5873|M.smegmatis_MC2_155 GLLDTLTDPDGPLLKLADVADTLNRLAPGLEALAPTIDALHDAVITLSQV MAB_0672c|M.abscessus_ATCC_199 GVLDKFTATDGPLQQLADLSEMLTKAAPSIDALTPTVELLTDTVSALSSV *::* :* .*** :** ::: * : :*.::** *:: * ::* .*: * Mvan_5176|M.vanbaalenii_PYR-1 VNPLSNIADRIPLPGRRMRPRPTSRPVTSQRIVEADD- Mflv_1580|M.gilvum_PYR-GCK VNPLSNIADRIPLPGRRIRNRPTTRPVPTQRIIESEE- TH_1249|M.thermoresistible__bu VNPLSNIADRIPFP-RRPPRRMPPRAVPSQRIIEPDDE Mb0779c|M.bovis_AF2122/97 VNPLSSIAERIPLPGRRPARRSSSRSVRSQRVVDSE-- Rv0756c|M.tuberculosis_H37Rv VNPLSSIAERIPLPGRRPARRSSSRSVRSQRVVDSE-- MMAR_4943|M.marinum_M VNPLSSIAERIPLPGRRPARRSSSRPVRSQRVVDADE- MUL_0462|M.ulcerans_Agy99 VNPLSSIAERIPLPGRRPARRSSSRPVRSQRVVDADE- MAV_0700|M.avium_104 VNPLSNIADRIPLPGRR---RPSSRAVRSARVIDTDE- MSMEG_5873|M.smegmatis_MC2_155 VNPLSNIADRIPLPRRYGRRSTTPTPVVSQRIVDADE- MAB_0672c|M.abscessus_ATCC_199 MSPLGGFLPR----RRPARPSGSPRPARSERVIEGER- :.**..: * * .. .. : *::: :