For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
KLVSLITAPLKISLAVADTGLAVASRAIDTGREILAALPDGRPADDQGDAPGAGLVSAVESLFGMAGRKS PLHSAMKVAELMEEDKPLGRALRAGGPVERIMAPGGLADRLTEPGGVLDRLFAKDGPVDRLTAPDGAVDR ALAPGGLVDQLLAEDGILERLMREEGVLDKFTATDGPLQQLADLSEMLTKAAPSIDALTPTVELLTDTVS ALSSVMSPLGGFLPRRRPARPSGSPRPARSERVIEGER*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_0672c | - | - | 100% (249) | hypothetical protein MAB_0672c |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0779c | - | 8e-51 | 42.63% (251) | hypothetical protein Mb0779c |
M. gilvum PYR-GCK | Mflv_1580 | - | 9e-50 | 43.43% (251) | hypothetical protein Mflv_1580 |
M. tuberculosis H37Rv | Rv0756c | - | 8e-51 | 42.63% (251) | hypothetical protein Rv0756c |
M. leprae Br4923 | - | - | - | - | - |
M. marinum M | MMAR_4943 | - | 1e-47 | 40.24% (251) | hypothetical protein MMAR_4943 |
M. avium 104 | MAV_0700 | - | 3e-45 | 40.41% (245) | hypothetical protein MAV_0700 |
M. smegmatis MC2 155 | MSMEG_5873 | - | 7e-43 | 35.36% (280) | hypothetical protein MSMEG_5873 |
M. thermoresistible (build 8) | TH_1249 | - | 2e-49 | 43.37% (249) | HYPOTHETICAL PROTEIN Rv0756c |
M. ulcerans Agy99 | MUL_0462 | - | 6e-48 | 40.24% (251) | hypothetical protein MUL_0462 |
M. vanbaalenii PYR-1 | Mvan_5176 | - | 2e-50 | 43.82% (251) | hypothetical protein Mvan_5176 |
CLUSTAL 2.0.9 multiple sequence alignment Mb0779c|M.bovis_AF2122/97 MNLGQTLVGIATWPARAGLAAADTGLNMAGAAVDMAKQALGDAGG----- Rv0756c|M.tuberculosis_H37Rv MNLGQTLVGIATWPARAGLAAADTGLNMAGAAVDMAKQALGDAGG----- MMAR_4943|M.marinum_M MNVGQSLVAFATAPARAGLAAAEASLNLAGAAVGLAKQALGETST----- MUL_0462|M.ulcerans_Agy99 MNVGQSLVAFATAPARAGLAAAEASLNLAGAAVGLAKQALGETST----- MAV_0700|M.avium_104 MNLAKNIVSAATAPARAGLAAADAGLSVASAAVGVAKRALGDSG------ Mflv_1580|M.gilvum_PYR-GCK MNLAKSLTELAFAPMRAGLAVADAGIGVARSGIDIASRAMGDSAN----- Mvan_5176|M.vanbaalenii_PYR-1 MNLGRSLTDLAFAPVRAGLAIAEVGLGMASGAMDIAQRSLGDSGNG---- TH_1249|M.thermoresistible__bu MNLGKSLMQVATAPVRIGLAVADAGLEVAAAGLGMAHRTLG----E---- MSMEG_5873|M.smegmatis_MC2_155 MNLGKTLVQVATAPVRIGIAIADAGLGIAGETLTAVQRTVTDSNP----- MAB_0672c|M.abscessus_ATCC_199 ----MKLVSLITAPLKISLAVADTGLAVASRAIDTGREILAALPDGRPAD .: * : .:* *:..: :* : . : Mb0779c|M.bovis_AF2122/97 ----------ASGSTSMANMLGIDDTIARANRLARLLDDDMPLGRAIAPN Rv0756c|M.tuberculosis_H37Rv ----------ASGSTSMANMLGIDDTIARANRLARLLDDDMPLGRAIAPN MMAR_4943|M.marinum_M ----------DAGNNAMASVLGIEDAIVRANRLAKLLDEDAPLGRAIAPN MUL_0462|M.ulcerans_Agy99 ----------DAGNNAMASVLGIEDAIVRANRLAKLLDEDAPLGRAIAPN MAV_0700|M.avium_104 ----------TAGTNAMTSMLGIDDAIVRANRLARLLDDDAPLGRAVAPD Mflv_1580|M.gilvum_PYR-GCK ---------ATQTPTSFASMLGVQDAVERANRLAKLMDEDQPLGRALASG Mvan_5176|M.vanbaalenii_PYR-1 ---------ARQAPTSFASMLGVQDAVDRANRLARLMDEDQPLGRALAPD TH_1249|M.thermoresistible__bu ---------PTAGPSSVAGILGLEDTLERANRLAKLLDEDAPLGRALAPD MSMEG_5873|M.smegmatis_MC2_155 ----------LTSRSSLAQMLGLDDAVERANRLARLMDDDAPLGRALAPD MAB_0672c|M.abscessus_ATCC_199 DQGDAPGAGLVSAVESLFGMAGRKSPLHSAMKVAELMEEDKPLGRALRAG :. : * ...: * ::*.*:::* *****: .. Mb0779c|M.bovis_AF2122/97 GPMDRMLRPGGVVDLLTQPGGLLDRLTAE--------------------- Rv0756c|M.tuberculosis_H37Rv GPMDRMLRPGGVVDLLTQPGGLLDRLTAE--------------------- MMAR_4943|M.marinum_M GPMDRMLRPGGVVDLLTAPGGLLDRVTAE--------------------- MUL_0462|M.ulcerans_Agy99 GPMDRMLRPGGVVDLLTAPGGLLDRVTAE--------------------- MAV_0700|M.avium_104 GPLDRLLRPGGVVDMLTSEGGLLDRLTAE--------------------- Mflv_1580|M.gilvum_PYR-GCK GPIDRLLQPGGVVDRLTAPGGALDRMTQD--------------------- Mvan_5176|M.vanbaalenii_PYR-1 GPIDRLLRPGGVVDRLTAPGGVLDRLTEE--------------------- TH_1249|M.thermoresistible__bu GPLDRLMRPGGVIDRLTAPGGVLDRLTDE--------------------- MSMEG_5873|M.smegmatis_MC2_155 GPVNRLLRPGGLVDQLTAEGGLLDRLTAENGPVTRAVAPGGLVDQITMEG MAB_0672c|M.abscessus_ATCC_199 GPVERIMAPGGLADRLTEPGGVLDRLFAK--------------------- **::*:: ***: * ** ** ***: . Mb0779c|M.bovis_AF2122/97 ---------GGAMQRALQPGGLADQLLAEDGLIERVLSEDGLADRLLAEG Rv0756c|M.tuberculosis_H37Rv ---------GGAMQRALQPGGLADQLLAEDGLIERVLSEDGLADRLLAEG MMAR_4943|M.marinum_M ---------GGAMHRALQPGGLADQLVAEDGLIERVLSEDGLADRLLSEG MUL_0462|M.ulcerans_Agy99 ---------GGAMHRALQPGGLADQLVAEDGLIERVLSEDGLADRLLSEG MAV_0700|M.avium_104 ---------GGALQRTLQPGGLADQLVAEDGLIERLLAEDGLADRLLAEG Mflv_1580|M.gilvum_PYR-GCK ---------DGGLMRAIEPGGLVDQLLAEDGLVDRLLAEDGVADRLFAEG Mvan_5176|M.vanbaalenii_PYR-1 ---------EGGLMRTLEPGGLVDQLLAEDGLVDRLLAEDGVADRLFAEG TH_1249|M.thermoresistible__bu ---------EGGLMRALEPGGLVDQLLAEDGLVERVLAEDGLADRLLAEG MSMEG_5873|M.smegmatis_MC2_155 GLLDRLTTDDGALSRVIAPGGLADQLLAHDGLIERVLREDGVADRLLAEG MAB_0672c|M.abscessus_ATCC_199 ---------DGPVDRLTAPDGAVDRALAPGGLVDQLLAEDGILERLMREE * : * *.* .*: :* .**::::* ***: :**: * Mb0779c|M.bovis_AF2122/97 GLIDKITAKDGPLEQLADVADTLARLTPGMEALEPAIATLQDAVIALTMV Rv0756c|M.tuberculosis_H37Rv GLIDKITAKDGPLEQLADVADTLARLTPGMEALEPAIATLQDAVIALTMV MMAR_4943|M.marinum_M GLVDKLTAKNGPLEQLADVADTLARLAPGMEALEPAIETLQDAVVALTMV MUL_0462|M.ulcerans_Agy99 GLVDKLTAKNGPLEQLADVADTLARLAPGMEALEPAIETLQDAVVALTMV MAV_0700|M.avium_104 GLIDKLTAKHGPLDQLADVADTLARLTPGMEALEPAIATLQDAVVALTMV Mflv_1580|M.gilvum_PYR-GCK GVVDTLTARNGPLEQLAAVADTLNRLAPGLEALEPTIEALRDAVIVLSQV Mvan_5176|M.vanbaalenii_PYR-1 GVVDTLTARNGPLEQLAAVADTLNRLAPGLEALEPTIEALREAVIVLSQV TH_1249|M.thermoresistible__bu GLIDRLTARDGPLEQLADVADTLNRLAPGLEALEPTIAALREAVITLSQV MSMEG_5873|M.smegmatis_MC2_155 GLLDTLTDPDGPLLKLADVADTLNRLAPGLEALAPTIDALHDAVITLSQV MAB_0672c|M.abscessus_ATCC_199 GVLDKFTATDGPLQQLADLSEMLTKAAPSIDALTPTVELLTDTVSALSSV *::* :* .*** :** ::: * : :*.::** *:: * ::* .*: * Mb0779c|M.bovis_AF2122/97 VNPLSSIAERIPLPGRRPARRSSSRSVRSQRVVDSE-- Rv0756c|M.tuberculosis_H37Rv VNPLSSIAERIPLPGRRPARRSSSRSVRSQRVVDSE-- MMAR_4943|M.marinum_M VNPLSSIAERIPLPGRRPARRSSSRPVRSQRVVDADE- MUL_0462|M.ulcerans_Agy99 VNPLSSIAERIPLPGRRPARRSSSRPVRSQRVVDADE- MAV_0700|M.avium_104 VNPLSNIADRIPLPGRR---RPSSRAVRSARVIDTDE- Mflv_1580|M.gilvum_PYR-GCK VNPLSNIADRIPLPGRRIRNRPTTRPVPTQRIIESEE- Mvan_5176|M.vanbaalenii_PYR-1 VNPLSNIADRIPLPGRRMRPRPTSRPVTSQRIVEADD- TH_1249|M.thermoresistible__bu VNPLSNIADRIPFP-RRPPRRMPPRAVPSQRIIEPDDE MSMEG_5873|M.smegmatis_MC2_155 VNPLSNIADRIPLPRRYGRRSTTPTPVVSQRIVDADE- MAB_0672c|M.abscessus_ATCC_199 MSPLGGFLPR----RRPARPSGSPRPARSERVIEGER- :.**..: * * .. .. : *::: :