For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MGTLINIDNGGTLTDICVWDGNAFTFTKTLTTPHDLSECLFTGIEKASDALYGEADITRLLHATEHIRYS TTQGTNALVERRGPMIGILTTIGGLDAGMKRGAAEKKLFTGLVGDRFLTVDPEADLEFDAVQKINRLTTL GAARVVVAAATPEEERQLRHVLLRKFPRHLLGSVPLIYSWELAGDRDDARRAWSCVVNAFLHPTMERFLY SAERRLQAYKVVNPLLVYRNDGASSRVAKSVALKTYSSGPRGGLEGTAALARVYGLPHALMMDIGGTTTD VGVVEGGAVAVADRGGIEGVHISYPMSDVTSSGVGGSSVIQVVDSEITVGPQSVGAAPGPACFGFGGKQA TITDVNLLLGVLDPDTYLDGTFTLDPSRSQAVITETIARPLGISLEEALIRMEHAYFQALSASFAPLVTE DTTLLAFGGAGPMSATGAARLAGVKQVLVPRTAAVFSAFGISFSDIGKTYEVIVAEPTTEAATETHDALL VRAERDMFQEGYALADCETSWQLLVENLEDGSVSRLPYQPGDEVDYPGSVVSLQLNAAAPLSHPDLTADA VVTATAAPAAGTRQVRSAADHVDDVPVHVLDDLSPGDGGEGPAIIEGPFFTARVLPGWSFRLTAAGDLLL NDKS
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_4896 | - | - | 100% (634) | hydantoinase/oxoprolinase |
M. vanbaalenii PYR-1 | Mvan_4898 | - | 3e-68 | 29.56% (707) | 5-oxoprolinase (ATP-hydrolyzing) |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0272c | oplA | 1e-35 | 25.85% (677) | 5-oxoprolinase |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | Rv0266c | oplA | 1e-35 | 25.85% (677) | 5-oxoprolinase |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | - | - | - | - | - |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | - | - | - | - | - |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment Mb0272c|M.bovis_AF2122/97 MVGAGWHFWVDRGGTFTDVVARRPDGRLLTHKLLS--DNPARYRDAAVAG Rv0266c|M.tuberculosis_H37Rv MVGAGWHFWVDRGGTFTDVVARRPDGRLLTHKLLS--DNPARYRDAAVAG Mvan_4896|M.vanbaalenii_PYR-1 ---MGTLINIDNGGTLTDICVWDGNAFTFTKTLTTPHDLSECLFTGIEKA * : :*.***:**: . :. :*:.* : * . . . Mb0272c|M.bovis_AF2122/97 IRALLANGEAG---TRVDAVRMGTTVATNALLERTGERTLLVITRGFGDA Rv0266c|M.tuberculosis_H37Rv IRALLANGEAG---TRVDAVRMGTTVATNALLERTGERTLLVITRGFGDA Mvan_4896|M.vanbaalenii_PYR-1 SDALYGEADITRLLHATEHIRYSTTQGTNALVERRGPMIGILTTIGGLDA ** .:.: .: :* .** .****:** * :: * * ** Mb0272c|M.bovis_AF2122/97 LRIAYQNRPRIFDRRIVLPEMLYERVVEVDERVTADGRVLRAPDLEALGE Rv0266c|M.tuberculosis_H37Rv LRIAYQNRPRIFDRRIVLPEMLYERVVEVDERVTADGRVLRAPDLEALGE Mvan_4896|M.vanbaalenii_PYR-1 GMKRGAAEKKLFTG--LVGDRFLTVDPEADLEFDAVQKINRLTTLGAARV . ::* :: : : *.* .. * :: * . * * Mb0272c|M.bovis_AF2122/97 KMRQAHADGIRAVAVVCLHSYLYPGHEREIGTLAQRIGFAQISLSSEVSP Rv0266c|M.tuberculosis_H37Rv KMRQAHADGIRAVAVVCLHSYLYPGHEREIGTLAQRIGFAQISLSSEVSP Mvan_4896|M.vanbaalenii_PYR-1 VVAAATPEEERQLRHVLLRKFPR-----------HLLGSVPLIYSWELAG : * .: * : * *:.: : :* . : * *:: Mb0272c|M.bovis_AF2122/97 LMKLVPRGDTTVVDAYLSPVLRRYINQVADQMRGVR----LMFMQSNGGL Rv0266c|M.tuberculosis_H37Rv LMKLVPRGDTTVVDAYLSPVLRRYINQVADQMRGVR----LMFMQSNGGL Mvan_4896|M.vanbaalenii_PYR-1 DRDDARRAWSCVVNAFLHPTMERFLYSAERRLQAYKVVNPLLVYRNDGAS . . *. : **:*:* *.:.*:: .. :::. : *:. :.:*. Mb0272c|M.bovis_AF2122/97 AQAGHFRGKDAILSGPAGGIVGMVRMSALAGFDHVIGFDMGGTSTDVSHY Rv0266c|M.tuberculosis_H37Rv AQAGHFRGKDAILSGPAGGIVGMVRMSALAGFDHVIGFDMGGTSTDVSHY Mvan_4896|M.vanbaalenii_PYR-1 SRVAKSVALKTYSSGPRGGLEGTAALARVYGLPHALMMDIGGTTTDVGVV ::..: . .: *** **: * . :: : *: *.: :*:***:***. Mb0272c|M.bovis_AF2122/97 AG-EYERVFTTQVAGVRLRAPMLDIHTVAAGGGSILHFDGSRYRVGPDSA Rv0266c|M.tuberculosis_H37Rv AG-EYERVFTTQVAGVRLRAPMLDIHTVAAGGGSILHFDGSRYRVGPDSA Mvan_4896|M.vanbaalenii_PYR-1 EGGAVAVADRGGIEGVHISYPMSDVTSSGVGGSSVIQVVDSEITVGPQSV * . : **:: ** *: : ..**.*:::. .*. ***:*. Mb0272c|M.bovis_AF2122/97 GADPGPACYRGGG-PLCVTDANVMLGRIQPTHFPSVFGPSGDQPLDAGTV Rv0266c|M.tuberculosis_H37Rv GADPGPACYRGGG-PLCVTDANVMLGRIQPTHFPSVFGPSGDQPLDAGTV Mvan_4896|M.vanbaalenii_PYR-1 GAAPGPACFGFGGKQATITDVNLLLGVLDPDTY-----LDGTFTLDP--- ** *****: ** :**.*::** ::* : .* .**. Mb0272c|M.bovis_AF2122/97 RRGFTDLAADIAARTGDDRSPEQVAEGYLRIAVANMANAVKKISVQKGHD Rv0266c|M.tuberculosis_H37Rv RRGFTDLAADIAARTGDDRSPEQVAEGYLRIAVANMANAVKKISVQKGHD Mvan_4896|M.vanbaalenii_PYR-1 SRSQAVITETIARPLG-----ISLEEALIRMEHAYFQALSASFAPLVTED *. : :: ** * .: *. :*: * : .:: .* Mb0272c|M.bovis_AF2122/97 VTRYALTTFGGAGGQHACAVADALGIRTVLIPPMAGVLSALGIGLADTTA Rv0266c|M.tuberculosis_H37Rv VTRYALTTFGGAGGQHACAVADALGIRTVLIPPMAGVLSALGIGLADTTA Mvan_4896|M.vanbaalenii_PYR-1 TT---LLAFGGAGPMSATGAARLAGVKQVLVPRTAAVFSAFGISFSDIGK .* * :***** * ..* *:: **:* *.*:**:**.::* Mb0272c|M.bovis_AF2122/97 MREQSVEIPLGPAAPQRLASVAESLERAARAELLDEGVPGERIRVVRRVH Rv0266c|M.tuberculosis_H37Rv MREQSVEIPLGPAAPQRLASVAESLERAARAELLDEGVPGERIRVVRRVH Mvan_4896|M.vanbaalenii_PYR-1 TYEVIVAEPTTEAATETHDALLVRAER----DMFQEGYALADCETSWQLL * * * **.: :: ** ::::** . .. :: Mb0272c|M.bovis_AF2122/97 LR--YEGTDTAIPVQLAEIETMATAFESSHRALYTFLLDRPLIAEAISVE Rv0266c|M.tuberculosis_H37Rv LR--YEGTDTAIPVQLAEIETMATAFESSHRALYTFLLDRPLIAEAISVE Mvan_4896|M.vanbaalenii_PYR-1 VENLEDGSVSRLPYQPGD------------------EVDYPGSVVSLQLN :. :*: : :* * .: :* * . ::.:: Mb0272c|M.bovis_AF2122/97 ATGLTDQPDLSQLGDQANDTTGSSETVRIYSNG-LWRDAPLRRREAMRPG Rv0266c|M.tuberculosis_H37Rv ATGLTDQPDLSQLGDQANDTTGSSETVRIYSNG-LWRDAPLRRREAMRPG Mvan_4896|M.vanbaalenii_PYR-1 AAAPLSHPDLTADAVVTATAAPAAGTRQVRSAADHVDDVPVHVLDDLSPG *:. .:***: . : :: :: * :: * . *.*:: : : ** Mb0272c|M.bovis_AF2122/97 DVLTGPAIIAEANATTVVDDGWQATMTETGHLLAQRVVTPPRPDAATRAG Rv0266c|M.tuberculosis_H37Rv DVLTGPAIIAEANATTVVDDGWQATMTETGHLLAQRVVTPPRPDAATRAG Mvan_4896|M.vanbaalenii_PYR-1 DGGEGPAIIEGPFFTARVLPGWSFRLTAAGDLLLNDKS------------ * ***** . *: * **. :* :*.** : Mb0272c|M.bovis_AF2122/97 FEAGFEADPVLLEIFNNLFMSIAEQMGFRLEATAQSVNIRERLDFSCALF Rv0266c|M.tuberculosis_H37Rv FEAGFEADPVLLEIFNNLFMSIAEQMGFRLEATAQSVNIRERLDFSCALF Mvan_4896|M.vanbaalenii_PYR-1 -------------------------------------------------- Mb0272c|M.bovis_AF2122/97 DPDGNLVANAPHIPVHLGSMGTTVKEVIRRRLSGMKPGDVYAVNDPYHGG Rv0266c|M.tuberculosis_H37Rv DPDGNLVANAPHIPVHLGSMGTTVKEVIRRRLSGMKPGDVYAVNDPYHGG Mvan_4896|M.vanbaalenii_PYR-1 -------------------------------------------------- Mb0272c|M.bovis_AF2122/97 THLPDITVITPVFNTGGEDVLFFVASRGHHAEIGGITPGSMPADSREIHE Rv0266c|M.tuberculosis_H37Rv THLPDITVITPVFNTGGEDVLFFVASRGHHAEIGGITPGSMPADSREIHE Mvan_4896|M.vanbaalenii_PYR-1 -------------------------------------------------- Mb0272c|M.bovis_AF2122/97 EGVLFDNWLLAENGRFREAETRRLLTEAPFGSRNPDTNLADLRAQIAANQ Rv0266c|M.tuberculosis_H37Rv EGVLFDNWLLAENGRFREAETRRLLTEAPFGSRNPDTNLADLRAQIAANQ Mvan_4896|M.vanbaalenii_PYR-1 -------------------------------------------------- Mb0272c|M.bovis_AF2122/97 KGVDEVGKMIDHFGRDVVAAYMRHVQDNAEEAVRRVIDRLDNGAYRYRMD Rv0266c|M.tuberculosis_H37Rv KGVDEVGKMIDHFGRDVVAAYMRHVQDNAEEAVRRVIDRLDNGAYRYRMD Mvan_4896|M.vanbaalenii_PYR-1 -------------------------------------------------- Mb0272c|M.bovis_AF2122/97 SGATIAVRITVDRAARSATIDFTGTSAQLDTNFNAPTSVVNAAVLYVFRT Rv0266c|M.tuberculosis_H37Rv SGATIAVRITVDRAARSATIDFTGTSAQLDTNFNAPTSVVNAAVLYVFRT Mvan_4896|M.vanbaalenii_PYR-1 -------------------------------------------------- Mb0272c|M.bovis_AF2122/97 LVADDIPLNDGCLRPLRIVVPEGSMLAPTHPAAVVAGNVETSQAITGALF Rv0266c|M.tuberculosis_H37Rv LVADDIPLNDGCLRPLRIVVPEGSMLAPTHPAAVVAGNVETSQAITGALF Mvan_4896|M.vanbaalenii_PYR-1 -------------------------------------------------- Mb0272c|M.bovis_AF2122/97 AALGVQAEGSGTMNNVTFGNERHQYYETVGSGSGAGDGYHGASVVQTHMT Rv0266c|M.tuberculosis_H37Rv AALGVQAEGSGTMNNVTFGNERHQYYETVGSGSGAGDGYHGASVVQTHMT Mvan_4896|M.vanbaalenii_PYR-1 -------------------------------------------------- Mb0272c|M.bovis_AF2122/97 NSRLTDPEVLEWRYPVLLREFAVRQGSGGAGRWRGGDGAVRRLEFTEPMT Rv0266c|M.tuberculosis_H37Rv NSRLTDPEVLEWRYPVLLREFAVRQGSGGAGRWRGGDGAVRRLEFTEPMT Mvan_4896|M.vanbaalenii_PYR-1 -------------------------------------------------- Mb0272c|M.bovis_AF2122/97 VSTLSGHRRVRPYGMAGGSPGELGRNRVERADGSTVELAGCGSTHVEPGD Rv0266c|M.tuberculosis_H37Rv VSTLSGHRRVRPYGMAGGSPGELGRNRVERADGSTVELAGCGSTHVEPGD Mvan_4896|M.vanbaalenii_PYR-1 -------------------------------------------------- Mb0272c|M.bovis_AF2122/97 TLVIETPGGGGYGPASTSARRRR Rv0266c|M.tuberculosis_H37Rv TLVIETPGGGGYGPASTSARRRR Mvan_4896|M.vanbaalenii_PYR-1 -----------------------