For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VADESSDSTEETRILRRAPLNTGAAPSAPTSEPVTQIVPRAQPVAVGPPRAARADPKSAIATAVTSILSG WATTVIATDLITGWWATDPLFCVAMGFLAAVSAAASISGLIALLLRRRTARLLVVVGAVIALLIFASLFV AGANLPALVYAMPLLPAASIVLAALPATARWSRSA
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_4872 | - | - | 100% (175) | hypothetical protein Mvan_4872 |
M. vanbaalenii PYR-1 | Mvan_4859 | - | 2e-05 | 27.92% (154) | hypothetical protein Mvan_4859 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_1863 | - | 2e-61 | 67.18% (195) | hypothetical protein Mflv_1863 |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_4552 | - | 8e-36 | 51.05% (143) | hypothetical protein MMAR_4552 |
M. avium 104 | MAV_1072 | - | 1e-38 | 45.56% (180) | hypothetical protein MAV_1072 |
M. smegmatis MC2 155 | MSMEG_5527 | - | 3e-53 | 57.59% (191) | hypothetical protein MSMEG_5527 |
M. thermoresistible (build 8) | TH_2201 | - | 3e-41 | 74.31% (109) | conserved hypothetical protein |
M. ulcerans Agy99 | MUL_4722 | - | 7e-37 | 46.37% (179) | hypothetical protein MUL_4722 |
CLUSTAL 2.0.9 multiple sequence alignment Mvan_4872|M.vanbaalenii_PYR-1 MADES------------------SDSTEET--RILRR---APLNTGAAP- Mflv_1863|M.gilvum_PYR-GCK MASDPPSTSSTAPEPGEPAQVPPSDRDEDTSTRIIRR---APLNTGMNTG MSMEG_5527|M.smegmatis_MC2_155 MSDSGPLDT--------------DQSGEDDRTRIIRRQPSSPLSGPVPTS TH_2201|M.thermoresistible__bu -------------------------------------------------- MMAR_4552|M.marinum_M ----------------------------------------------MTTD MUL_4722|M.ulcerans_Agy99 MTAPGDPAASETP----LDPSPSADEP---RTRIIRRAPTGPQP--VTTD MAV_1072|M.avium_104 MTAPNDPPSGPRP----SEPAAEPSPPSDTRTRIIRRAPTGPIP--VTPD Mvan_4872|M.vanbaalenii_PYR-1 -SAPTSEPVTQIVPR-----------AQPVAVGP------PRAARA---- Mflv_1863|M.gilvum_PYR-GCK SRAAAAEPQTTILRRHPTGALPAL--SEPVTQAVRHPEPVPGPPPA---- MSMEG_5527|M.smegmatis_MC2_155 DPLSDDVPKTSIIRRHPTGAIPTAPDAEPQTSLIGAQSDASGPEDAGEAA TH_2201|M.thermoresistible__bu -------------------------------------------------- MMAR_4552|M.marinum_M SATAKISHRPTSLDE-----------TARADRLPPLPDGLP-VEPSS--- MUL_4722|M.ulcerans_Agy99 SATAKISHRPTSLDE-----------TARADRLPPLPDGLP-VEPSS--- MAV_1072|M.avium_104 SPTTHFAPQPPSYRG-----------GPRAGRTG--YSGLPALEPSD--- Mvan_4872|M.vanbaalenii_PYR-1 -------------------DPKSAIATAVTSILSGWATTVIATDLITGWW Mflv_1863|M.gilvum_PYR-GCK -------------------DPTSAIATTVASIVAGWATGVIATDLITGWW MSMEG_5527|M.smegmatis_MC2_155 TAYVPRARPLVIPRRASANDPKTAVTAATLSILSGWGTAVIATDLIAGWW TH_2201|M.thermoresistible__bu ----------------------------VVTILSGWATAVIATDLITGWW MMAR_4552|M.marinum_M ---------------------RTAVATAAVSIVNGWATSVVATDLITGWW MUL_4722|M.ulcerans_Agy99 ---------------------RTAVATAAVSIVNGWATSVVATDLITGWW MAV_1072|M.avium_104 ---------------------RTAVAACAVAIVSGWATSVVATDLIAGWW . :*: **.* *:*****:*** Mvan_4872|M.vanbaalenii_PYR-1 ATDPLFCVAMGFLAAVSAAASISGLIALLLRRRTARLLVVVGAVIALLIF Mflv_1863|M.gilvum_PYR-GCK ATDPLFCVAMGFLAAVSAAASISGVIALLLRRRTARLLIVVGAVIALLIF MSMEG_5527|M.smegmatis_MC2_155 RTDQLFCVAVGFLTAVSAAATIGGLIALLLRRRLGRLLIVVGAVIALLIF TH_2201|M.thermoresistible__bu RTDRLFCVAVGFLTAVSAAAMIGGLILMLLRRRLGRLLTVVGGVIGLLIF MMAR_4552|M.marinum_M RSDRLFCIAVGFLALVFASSTTAGVIMLLLRRPFGRYLIVVGAVVAVLTY MUL_4722|M.ulcerans_Agy99 RSGRLFCIAVGFLALVFASSTTAGVIMLLLRRPFGRYLIVVGAVVAVLTY MAV_1072|M.avium_104 RSDRLFCIAVGFLALVFAATTVSGVIGLLQRRSVSRYLLLAGALVAFLTY :. ***:*:***: * *:: .*:* :* ** .* * :.*.::..* : Mvan_4872|M.vanbaalenii_PYR-1 ASLFVAGANLPALVYAMPLLPAASIVLAALPATARWSRSA- Mflv_1863|M.gilvum_PYR-GCK AGLFVAGAALPGPVYALPLLPAAAIALAALPGTARWSRAD- MSMEG_5527|M.smegmatis_MC2_155 GSLFIAGAKLHPLVYAIPVLPVSAILFAVLPATGRWAVRSE TH_2201|M.thermoresistible__bu GSLFVAGAALPPVVYAIPILPVTSIVLTVLPATGRWADLS- MMAR_4552|M.marinum_M GGVFIAGARVAWIVHAFPVLPIASAVLALHPQTRRWLFD-- MUL_4722|M.ulcerans_Agy99 GGVFIAGALVAWIVHAFPVLPIASAVLALHPQTRRWLFD-- MAV_1072|M.avium_104 IGVFIAGARVAWVVHLLPVLPIATVVLVLLPQTKRWLDA-- .:*:*** : *: :*:** :: :. * * **