For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MNDTPSREAAHALALAEMAETDADGSTAGTRDIGLLILRLGVGAALVQAGLIKVADFSMTVQFMTEAGWR LPAFAAFMVTATETLSGVALLLGVLTPLAGSAALGAMLCAWAVNVSAAAFWSEPFNVPFLIGLGAAALIF TGAGGYSVDARLVTRLPWSTRVRVALLVLAFAVAVLTWVALYGVNPIHFTAPPAPPTP
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_4574 | - | - | 100% (198) | DoxX family protein |
M. vanbaalenii PYR-1 | Mvan_2120 | - | 9e-15 | 28.80% (184) | DoxX family protein |
M. vanbaalenii PYR-1 | Mvan_4592 | - | 7e-07 | 28.57% (126) | DoxX family protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3030c | - | 2e-14 | 29.94% (177) | hypothetical protein Mb3030c |
M. gilvum PYR-GCK | Mflv_2130 | - | 6e-67 | 72.22% (162) | DoxX family protein |
M. tuberculosis H37Rv | Rv3005c | - | 3e-14 | 29.94% (177) | hypothetical protein Rv3005c |
M. leprae Br4923 | MLBr_01698 | - | 4e-13 | 26.13% (199) | hypothetical protein MLBr_01698 |
M. abscessus ATCC 19977 | MAB_3332c | - | 3e-20 | 35.15% (202) | hypothetical protein MAB_3332c |
M. marinum M | MMAR_1707 | - | 7e-16 | 31.94% (191) | hypothetical protein MMAR_1707 |
M. avium 104 | MAV_3854 | - | 1e-13 | 30.00% (180) | DoxX subfamily protein, putative |
M. smegmatis MC2 155 | MSMEG_5179 | - | 4e-52 | 58.96% (173) | DoxX subfamily protein, putative |
M. thermoresistible (build 8) | TH_4069 | - | 2e-15 | 32.16% (171) | PUTATIVE DoxX family protein |
M. ulcerans Agy99 | MUL_1944 | - | 4e-16 | 31.94% (191) | hypothetical protein MUL_1944 |
CLUSTAL 2.0.9 multiple sequence alignment Mb3030c|M.bovis_AF2122/97 MTS-SNDSHWQRPDDSPGPMPGRPVSASLVDPEDDLTPARYAGDFG--SG Rv3005c|M.tuberculosis_H37Rv MTS-SNDSHWQRPDDSPGPMPGRPVSASLVDPEDDLTPARYAGDFG--SG MMAR_1707|M.marinum_M MTS-SNDSRWQRPDDSPGPIPGRPVTASLVDPEDDLTPAKYSSDFGS-AG MUL_1944|M.ulcerans_Agy99 MTS-SNDSRWQRPDDSPGPIPGRPVTASLVDPEDDLTPAKYSSDFGS-AG MLBr_01698|M.leprae_Br4923 MTGQSHDEHWRRPGECPEPIPGRPASASLVDPEDDLTPVGYPGDF----G MAV_3854|M.avium_104 MTSQPNDAHWQRPGESPEPTPGRPASARLVDPEDDLTPVGYPGDFNPSTG TH_4069|M.thermoresistible__bu ---------------------VRPASASLVDPEDDLSST-YGGDIE---- MAB_3332c|M.abscessus_ATCC_199 MTGHSDDPQVWR----------KPP--ELVDPEDDVPSATYGGDFE---- Mvan_4574|M.vanbaalenii_PYR-1 -------------------MNDTPSREAAHALALAEM------------- Mflv_2130|M.gilvum_PYR-GCK -------------------MDDITTTPSR--------------------- MSMEG_5179|M.smegmatis_MC2_155 -------------------MTANFMEKTS--------------------- Mb3030c|M.bovis_AF2122/97 TTTVIPPYDAASS-GVGNS-GYSLIEAAEPLPYVQPQPG----------- Rv3005c|M.tuberculosis_H37Rv TTTVIPPYDAASS-GVGNS-GYSLIEAAEPLPYVQPQPG----------- MMAR_1707|M.marinum_M TTTVIPPYDPTNS-GAVPS-GYNLMDAQEPLPYVQPQPG----------- MUL_1944|M.ulcerans_Agy99 TTTVIPPYDPTNS-GAVPS-GYNLMDAQEPLPYVQPQPG----------- MLBr_01698|M.leprae_Br4923 TTTVIPYSDPDHLKGPGGT-GYNLLDQQEPLPYVQPQ------------- MAV_3854|M.avium_104 TTTVIPYGGAAAVAGSGAA-GYHLLEQQEPLPYVQPHSA----------- TH_4069|M.thermoresistible__bu -TTAIPSYPSTGT-ASAQS-PFALTGEPEPLPYVQPDDGSSFANYSAGAA MAB_3332c|M.abscessus_ATCC_199 -TTAIPQYQAERLTSSHNVKEVGPLYDPAPLPYAEPATT----------- Mvan_4574|M.vanbaalenii_PYR-1 -------------------------------------------------- Mflv_2130|M.gilvum_PYR-GCK -------------------------------------------------- MSMEG_5179|M.smegmatis_MC2_155 -------------------------------------------------- Mb3030c|M.bovis_AF2122/97 -------------RQVPAGSAGIDMD--DDERVRAAGRRGTQNLGLLILR Rv3005c|M.tuberculosis_H37Rv -------------RQVPAGSAGIDMD--DDERVRAAGRRGTQNLGLLILR MMAR_1707|M.marinum_M ------------ARHIPATPAALDMDE-DDERIRAASRRGTQNFGLLILR MUL_1944|M.ulcerans_Agy99 ------------ARHIPATPAALDMDE-DDERIRAASRRGTQNFGLLILR MLBr_01698|M.leprae_Br4923 ------------ARHAVAEPTEIDSDQ-DNERLHTVGRRGTQHLGLLVLR MAV_3854|M.avium_104 ------------ARHAAPEPTDDD-DE-HHDRLLDVGRRGTQHLGLLVLR TH_4069|M.thermoresistible__bu SSFSTGPASSFPAGSFPAGPAEVGTDELTEDRIKAAGRRGTMDLGLMLIR MAB_3332c|M.abscessus_ATCC_199 --------------QISAEAVHARHAAPWGTQDPAGDRRGTQDLGLLLLR Mvan_4574|M.vanbaalenii_PYR-1 -----------------------------AETDADGSTAGTRDIGLLILR Mflv_2130|M.gilvum_PYR-GCK -----------------------------LSTPAR-NVDATLDVGLLVLR MSMEG_5179|M.smegmatis_MC2_155 -----------------------------LSSGATSSARSMTDTGLLILR . . . **:::* Mb3030c|M.bovis_AF2122/97 VGLGAVLIAHGLQKLFGWWDGQGLAGFQNSLSDIGYQHAEILAYVSAGGE Rv3005c|M.tuberculosis_H37Rv VGLGAVLIAHGLQKLFGWWDGQGLAGFQNSLSDIGYQHAEILAYVSAGGE MMAR_1707|M.marinum_M VGLGAVLIAHGLQKLFGWWGGSGVTAFKNSLSDVGFQHADILAYVGAGGE MUL_1944|M.ulcerans_Agy99 VGLGAVLIAHGLQKLFGWWGGSGVTAFKNSLSDVGFQHADILAYVGAGGE MLBr_01698|M.leprae_Br4923 VGLGVVLAAQGLHKLFGWWGGQGLTGFKNSLTQVGYQHADILAYVSAGGE MAV_3854|M.avium_104 AGLGVVLGAHGLQKLFGWWGGSGVTGLRNSLSDVGYQHADILAYVSAGGE TH_4069|M.thermoresistible__bu VGLGALLVVHGLQQAFGWWGGDGLGGLRDALTESGFRYAEALTYAVAGAQ MAB_3332c|M.abscessus_ATCC_199 VGVGAVLIAHGLRKVFGWWGGTGLSGFEATLGDRGFKYADILTYVGVTAE Mvan_4574|M.vanbaalenii_PYR-1 LGVGAALVQAGLIKVA------DFSMTVQFMTEAGWRLPAFAAFMVTATE Mflv_2130|M.gilvum_PYR-GCK LGLGAALLHAAFLKLS------DFPTTIQFMADAGWRLPAFAAFMVTATE MSMEG_5179|M.smegmatis_MC2_155 LALGATMLQAGLIKAA------DFSTTAGFMESGGWSLPTFAALMVTTAE .:*. : .: : .. : . *: . : . : Mb3030c|M.bovis_AF2122/97 IVAGVLLVLGLFTPLAAAGALAFLINGLLAGISAQHSR-PVAYFLQDGHE Rv3005c|M.tuberculosis_H37Rv IVAGVLLVLGLFTPLAAAGALAFLINGLLAGISAQHSR-PVAYFLQDGHE MMAR_1707|M.marinum_M IVVGVLLVLGLFTPLAGAGALAFLINGTLANVSARPHS-QFSYFLPDGHE MUL_1944|M.ulcerans_Agy99 IVVGVLLVLGLFTPLAGAGALAFLMNGTLANVSARPHS-QFSYFLPDDHE MLBr_01698|M.leprae_Br4923 AVAGVLLVLGLFAPVVAAGALAFLINGLLA---AWPHSPLFSFFLPDGNE MAV_3854|M.avium_104 LVAGVLLVLGLFTPLAAAGALAFLINGLLATISARPHAHTFSFFLPQGHE TH_4069|M.thermoresistible__bu IGAGVLLVLGLFTPLAAAGALAYLINVLLAGISANNGA--LPFFLPEGYE MAB_3332c|M.abscessus_ATCC_199 LGAGVLLVLGLLTPLAGAAALAFTVNVLLSDMVSDKAN-RYAIFWPEGHE Mvan_4574|M.vanbaalenii_PYR-1 TLSGVALLLGVLTPLAGSAALGAMLCAWAVNVSAAAFW-------SEPFN Mflv_2130|M.gilvum_PYR-GCK TLAGIGVVLGVMTPLAASAGLGAMLCAWAVNVSAGAVW-------EDPFN MSMEG_5179|M.smegmatis_MC2_155 TLGGLGLLFGVLTPLAACAVIGAMVDAWAVNVSTDVVW-------AMPFN *: :::*:::*:.... :. : : : Mb3030c|M.bovis_AF2122/97 YQITLVVMAVAVILSGPGRYGLDAARG-WAHRPFIGSFVALLGGIAAGIA Rv3005c|M.tuberculosis_H37Rv YQITLVVMAVAVILSGPGRYGLDAARG-WAHRPFIGSFVALLGGIAAGIA MMAR_1707|M.marinum_M YQITLVVMAVAVILSGPGRYGLDAGRG-WAHRPFIGSFVALLTGIAAGIA MUL_1944|M.ulcerans_Agy99 YQITLVVMAVAVILSGPGRYGLDAGRG-WAHRPFIGSFVALLTGIAAGIA MLBr_01698|M.leprae_Br4923 HQITLIVMDVTVILCGPGRYGLDAGRR-WAYRPFIGSFIVLIAGIAAGIA MAV_3854|M.avium_104 YQITLIVMATAVILCGPGRYGLDARRG-WAHRPFIGSFVALLAGIAAGVG TH_4069|M.thermoresistible__bu FEITLIVVAAALVLTGPGRYGLDAGRG-WARRPFIGSFLALLLGVGAGIA MAB_3332c|M.abscessus_ATCC_199 FELLMIVAIVAVILVGPGRYGFDAGRG-WARRPFIGSFAAVVLGFGGAAA Mvan_4574|M.vanbaalenii_PYR-1 VPFLIGLGAAALIFTGAGGYSVDARLVTRLPWSTRVRVALLVLAFAVAVL Mflv_2130|M.gilvum_PYR-GCK APFLIGLGAATLLATGAGGYAVDARVLSRFSWSPRVKVILLVLAFVTAVV MSMEG_5179|M.smegmatis_MC2_155 VPFLVAFGAATLLFTGSGRWSVDHRVFGRSTVPRPIAVGLLVAGVAVAIL : : . .::: *.* :..* . . :: .. . Mb3030c|M.bovis_AF2122/97 VWVLLNGANPLA---------- Rv3005c|M.tuberculosis_H37Rv VWVLLNGANPLA---------- MMAR_1707|M.marinum_M IWVLLNGVNPVA---------- MUL_1944|M.ulcerans_Agy99 IWVLLNGVNPVA---------- MLBr_01698|M.leprae_Br4923 VWVLLNGVNPLA---------- MAV_3854|M.avium_104 VWVALNGVNPIG---------- TH_4069|M.thermoresistible__bu IWVLLNGANPLG---------- MAB_3332c|M.abscessus_ATCC_199 IWVFLNGTNPLA---------- Mvan_4574|M.vanbaalenii_PYR-1 TWVALYGVNPIHFTAPPAPPTP Mflv_2130|M.gilvum_PYR-GCK TWVALYGVNPIHFGAV------ MSMEG_5179|M.smegmatis_MC2_155 TWMALNGVNPIHFSAPQG---- *: * *.**: