For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
GAWKNATAGEPLRGVVGRPASSSVFDLRRWAADGRTGRYVEHFWSVAWDLRGRDPFDTSVITFPAMHITR EWGEDGARHGFPLPNTLVHGVVEQVFRTTISERGWVVGARFRPGGFTARFGGDASTMTGRIQPVDDLSDV FGGPVLVPDDVDAAAAEFDRLIAHGAEPDDTYRALAAVVDRIRDDSGIHRVEQVMSHSPWSVRTTQRVFR RYVGVPVKWVLCRYRLQNAALEIETDPAVDFADLAVRLGWYDQAHFINDFRAMLGSTPGEYAATHGRRP*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_4454 | - | - | 100% (280) | helix-turn-helix domain-containing protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_2241 | - | 1e-133 | 80.22% (278) | helix-turn-helix domain-containing protein |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_0738 | - | 4e-30 | 33.92% (286) | AraC family transcriptional regulator |
M. marinum M | - | - | - | - | - |
M. avium 104 | MAV_0221 | - | 1e-09 | 28.18% (220) | transcriptional regulator, AraC family protein |
M. smegmatis MC2 155 | MSMEG_5025 | - | 1e-108 | 67.14% (280) | putative transcriptional regulator |
M. thermoresistible (build 8) | TH_1844 | - | 1e-102 | 62.77% (282) | putative transcriptional regulator |
M. ulcerans Agy99 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment Mvan_4454|M.vanbaalenii_PYR-1 --MGAWKNATA------GEPLRGVVGRPASSSVFDLRRWAADGRTGRYVE Mflv_2241|M.gilvum_PYR-GCK --MAAWKNTTA------GAPLRGVVGRPAGASAFDLRRWAADGRTSRYVE MSMEG_5025|M.smegmatis_MC2_155 --MAAWKN----------APERGVVGRPGSASAFDLTRWAPSPEAGRFVE TH_1844|M.thermoresistible__bu VTVGAWKNASPP-----VAPVRGVVGRAVDASVYDLYRWEPSAEAAPFVE MAB_0738|M.abscessus_ATCC_1997 --MPSWTNPTEPREGLGADPWRAVVRPEGLLPRIDRVVLPGRGPLRDWVE MAV_0221|M.avium_104 -------------------------------------MYRPSPPLAEHIE :* Mvan_4454|M.vanbaalenii_PYR-1 HFWSVAWDLRGRDPFDTSVITFPAMHITREWGEDG-------ARHGFPLP Mflv_2241|M.gilvum_PYR-GCK HYWSVNWDLRGNDPFDSTVITFPAMHITHEWGQDA-------VRHGFSLP MSMEG_5025|M.smegmatis_MC2_155 HYWSVRWDRREAGPHESTVITFPAVHLTREWGDDI-------ARHGHPLP TH_1844|M.thermoresistible__bu HFWAVSWDLRDRPPQPSTVISFPVMHLTHEWGEDG-------VRHGFSLP MAB_0738|M.abscessus_ATCC_1997 RIWSLSWAEPVPADFSG-VIAHPTVHLTLEGGPPGE------IRHGHRLP MAV_0221|M.avium_104 YFGYWRGDEALGVHTSRALPRGAVTAIIDVGGRTDLGFYASDARTPLTVP : .. : * * :* Mvan_4454|M.vanbaalenii_PYR-1 NTLVHGVVEQVFRTTISERGWVVGARFRPGGFTARFGGDASTMTGRIQPV Mflv_2241|M.gilvum_PYR-GCK NTLVHGVVEQVFRTTISEKGCVVGARFRPGGFTARFGGDASVRTGCVEPI MSMEG_5025|M.smegmatis_MC2_155 NTLLHGVVTQVFRTTISSRGVVVGARFHPGGFTARFGRDAGELTDRVVPV TH_1844|M.thermoresistible__bu ATLIHGVVPQVFRITLNERGAVAGARFRPGGFTARFGRDAASYTGRVVRA MAB_0738|M.abscessus_ATCC_1997 AGLLHGVVTERFAVDLPAPGWVVGLHLRPGAIFDLTGTEASTWTGRVVPW MAV_0221|M.avium_104 PAFAAGAGATAYVVRVAPAHTVMTIHFRPAGALAFLGSPLSDLEDALVGL : *. : : * :::*.. * . . : Mvan_4454|M.vanbaalenii_PYR-1 DDLS--D-VFGGPVLVPDDVDAAAAEFDRLIAH-GAEPDDTYR--ALAAV Mflv_2241|M.gilvum_PYR-GCK GDL------FGAAVALPDDVEDAAAELDTLIGG-GGPPDAVFD--ALSAL MSMEG_5025|M.smegmatis_MC2_155 DDD-----LFGGPIDLGCDVSVVRSGFDAVIGDYSGDPDPVYA--RLMPL TH_1844|M.thermoresistible__bu EHEL--SGELSIGTIISDELTAVAEQLDTVIGGHRGAPDTTYV--ALTRL MAB_0738|M.abscessus_ATCC_1997 DQAW--PGWDLTAVWEACDARARAEAIERAAQEMLGGRRPTADGHRARSV MAV_0221|M.avium_104 EDLWGRDAALLREQLIDAGSPPRRVALLQAFLVRRMRRNAVWPPARLAPV . : . : Mvan_4454|M.vanbaalenii_PYR-1 VDRIRDDSGIHRVEQVMSHSPWSVRTTQRVFRRYVGVPVKWVLCRYRLQN Mflv_2241|M.gilvum_PYR-GCK VDRIRDDSGVHRVEQVMDLSPWSVRTTQRVFRRYVGVPVKWVLCRYRLQN MSMEG_5025|M.smegmatis_MC2_155 LERMREDPTLHRVEQVMEHSPWSVRTTQRVFRRYVGVPVKWVLCRYRLQQ TH_1844|M.thermoresistible__bu LDRIREDDRMHRVDQVMEHAPWSVRTTQRIFRRYVGVPVKWVLCRYRLQQ MAB_0738|M.abscessus_ATCC_1997 ERLVRTDPSIASVADLAARAALSQRSLQRLCRSHLGVSPRWLLRRARVID MAV_0221|M.avium_104 LRGADLDPSMR-VSKAQELSGLSRKRFAALFRCEVGLSPKAYLRVLRLQA * : * . : * : : * :*:. : * *: Mvan_4454|M.vanbaalenii_PYR-1 AALEIETDPAVDFADLAVRLGWYDQAHFINDFRAMLGSTPGEYAATHGRR Mflv_2241|M.gilvum_PYR-GCK AALEIETDPGVDFADLAVRLGWYDQAHFINDFRSMLGSTPGEYAATYGQG MSMEG_5025|M.smegmatis_MC2_155 AALEIESTGSVDFADLAVRLGWYDQAHFINDFRGMLGCTPGEYAMRFGQK TH_1844|M.thermoresistible__bu AALEIESSPDVDFADLAVRLGWYDQPHFINDFRAMLGCTPAQYADRYRSR MAB_0738|M.abscessus_ATCC_1997 AHQLLS-ETDLDVAEVASRLGWYDQAHLTRDYTKLTGTPPVRLRQERREG MAV_0221|M.avium_104 ALRALDTPARG--ATIAADLGYFDQAHFVREFRAFTGATPTQYARRRSSM * :. * :* **::**.*: .:: : * .* . Mvan_4454|M.vanbaalenii_PYR-1 P------- Mflv_2241|M.gilvum_PYR-GCK R------- MSMEG_5025|M.smegmatis_MC2_155 GGGS---- TH_1844|M.thermoresistible__bu T------- MAB_0738|M.abscessus_ATCC_1997 R------- MAV_0221|M.avium_104 PGHVELAR