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M. vanbaalenii PYR-1 Mvan_4454 (-)

annotation: helix-turn-helix domain-containing protein
coordinates: 4783215 - 4784057
length: 280

GAWKNATAGEPLRGVVGRPASSSVFDLRRWAADGRTGRYVEHFWSVAWDLRGRDPFDTSVITFPAMHITR
EWGEDGARHGFPLPNTLVHGVVEQVFRTTISERGWVVGARFRPGGFTARFGGDASTMTGRIQPVDDLSDV
FGGPVLVPDDVDAAAAEFDRLIAHGAEPDDTYRALAAVVDRIRDDSGIHRVEQVMSHSPWSVRTTQRVFR
RYVGVPVKWVLCRYRLQNAALEIETDPAVDFADLAVRLGWYDQAHFINDFRAMLGSTPGEYAATHGRRP*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. vanbaalenii PYR-1Mvan_4454--100% (280)helix-turn-helix domain-containing protein

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97-----
M. gilvum PYR-GCKMflv_2241-1e-13380.22% (278) helix-turn-helix domain-containing protein
M. tuberculosis H37Rv-----
M. leprae Br4923-----
M. abscessus ATCC 19977MAB_0738-4e-3033.92% (286) AraC family transcriptional regulator
M. marinum M-----
M. avium 104MAV_0221-1e-0928.18% (220) transcriptional regulator, AraC family protein
M. smegmatis MC2 155MSMEG_5025-1e-10867.14% (280) putative transcriptional regulator
M. thermoresistible (build 8)TH_1844-1e-10262.77% (282) putative transcriptional regulator
M. ulcerans Agy99-----

CLUSTAL 2.0.9 multiple sequence alignment


Mvan_4454|M.vanbaalenii_PYR-1       --MGAWKNATA------GEPLRGVVGRPASSSVFDLRRWAADGRTGRYVE
Mflv_2241|M.gilvum_PYR-GCK          --MAAWKNTTA------GAPLRGVVGRPAGASAFDLRRWAADGRTSRYVE
MSMEG_5025|M.smegmatis_MC2_155      --MAAWKN----------APERGVVGRPGSASAFDLTRWAPSPEAGRFVE
TH_1844|M.thermoresistible__bu      VTVGAWKNASPP-----VAPVRGVVGRAVDASVYDLYRWEPSAEAAPFVE
MAB_0738|M.abscessus_ATCC_1997      --MPSWTNPTEPREGLGADPWRAVVRPEGLLPRIDRVVLPGRGPLRDWVE
MAV_0221|M.avium_104                -------------------------------------MYRPSPPLAEHIE
                                                                                    :*

Mvan_4454|M.vanbaalenii_PYR-1       HFWSVAWDLRGRDPFDTSVITFPAMHITREWGEDG-------ARHGFPLP
Mflv_2241|M.gilvum_PYR-GCK          HYWSVNWDLRGNDPFDSTVITFPAMHITHEWGQDA-------VRHGFSLP
MSMEG_5025|M.smegmatis_MC2_155      HYWSVRWDRREAGPHESTVITFPAVHLTREWGDDI-------ARHGHPLP
TH_1844|M.thermoresistible__bu      HFWAVSWDLRDRPPQPSTVISFPVMHLTHEWGEDG-------VRHGFSLP
MAB_0738|M.abscessus_ATCC_1997      RIWSLSWAEPVPADFSG-VIAHPTVHLTLEGGPPGE------IRHGHRLP
MAV_0221|M.avium_104                YFGYWRGDEALGVHTSRALPRGAVTAIIDVGGRTDLGFYASDARTPLTVP
                                                      :   ..  :    *           *    :*

Mvan_4454|M.vanbaalenii_PYR-1       NTLVHGVVEQVFRTTISERGWVVGARFRPGGFTARFGGDASTMTGRIQPV
Mflv_2241|M.gilvum_PYR-GCK          NTLVHGVVEQVFRTTISEKGCVVGARFRPGGFTARFGGDASVRTGCVEPI
MSMEG_5025|M.smegmatis_MC2_155      NTLLHGVVTQVFRTTISSRGVVVGARFHPGGFTARFGRDAGELTDRVVPV
TH_1844|M.thermoresistible__bu      ATLIHGVVPQVFRITLNERGAVAGARFRPGGFTARFGRDAASYTGRVVRA
MAB_0738|M.abscessus_ATCC_1997      AGLLHGVVTERFAVDLPAPGWVVGLHLRPGAIFDLTGTEASTWTGRVVPW
MAV_0221|M.avium_104                PAFAAGAGATAYVVRVAPAHTVMTIHFRPAGALAFLGSPLSDLEDALVGL
                                      :  *.    :   :     *   :::*..     *   .   . :   

Mvan_4454|M.vanbaalenii_PYR-1       DDLS--D-VFGGPVLVPDDVDAAAAEFDRLIAH-GAEPDDTYR--ALAAV
Mflv_2241|M.gilvum_PYR-GCK          GDL------FGAAVALPDDVEDAAAELDTLIGG-GGPPDAVFD--ALSAL
MSMEG_5025|M.smegmatis_MC2_155      DDD-----LFGGPIDLGCDVSVVRSGFDAVIGDYSGDPDPVYA--RLMPL
TH_1844|M.thermoresistible__bu      EHEL--SGELSIGTIISDELTAVAEQLDTVIGGHRGAPDTTYV--ALTRL
MAB_0738|M.abscessus_ATCC_1997      DQAW--PGWDLTAVWEACDARARAEAIERAAQEMLGGRRPTADGHRARSV
MAV_0221|M.avium_104                EDLWGRDAALLREQLIDAGSPPRRVALLQAFLVRRMRRNAVWPPARLAPV
                                     .                        :             .        :

Mvan_4454|M.vanbaalenii_PYR-1       VDRIRDDSGIHRVEQVMSHSPWSVRTTQRVFRRYVGVPVKWVLCRYRLQN
Mflv_2241|M.gilvum_PYR-GCK          VDRIRDDSGVHRVEQVMDLSPWSVRTTQRVFRRYVGVPVKWVLCRYRLQN
MSMEG_5025|M.smegmatis_MC2_155      LERMREDPTLHRVEQVMEHSPWSVRTTQRVFRRYVGVPVKWVLCRYRLQQ
TH_1844|M.thermoresistible__bu      LDRIREDDRMHRVDQVMEHAPWSVRTTQRIFRRYVGVPVKWVLCRYRLQQ
MAB_0738|M.abscessus_ATCC_1997      ERLVRTDPSIASVADLAARAALSQRSLQRLCRSHLGVSPRWLLRRARVID
MAV_0221|M.avium_104                LRGADLDPSMR-VSKAQELSGLSRKRFAALFRCEVGLSPKAYLRVLRLQA
                                          *  :  * .    :  * :    : *  :*:. :  *   *:  

Mvan_4454|M.vanbaalenii_PYR-1       AALEIETDPAVDFADLAVRLGWYDQAHFINDFRAMLGSTPGEYAATHGRR
Mflv_2241|M.gilvum_PYR-GCK          AALEIETDPGVDFADLAVRLGWYDQAHFINDFRSMLGSTPGEYAATYGQG
MSMEG_5025|M.smegmatis_MC2_155      AALEIESTGSVDFADLAVRLGWYDQAHFINDFRGMLGCTPGEYAMRFGQK
TH_1844|M.thermoresistible__bu      AALEIESSPDVDFADLAVRLGWYDQPHFINDFRAMLGCTPAQYADRYRSR
MAB_0738|M.abscessus_ATCC_1997      AHQLLS-ETDLDVAEVASRLGWYDQAHLTRDYTKLTGTPPVRLRQERREG
MAV_0221|M.avium_104                ALRALDTPARG--ATIAADLGYFDQAHFVREFRAFTGATPTQYARRRSSM
                                    *   :.       * :*  **::**.*: .::  : * .* .        

Mvan_4454|M.vanbaalenii_PYR-1       P-------
Mflv_2241|M.gilvum_PYR-GCK          R-------
MSMEG_5025|M.smegmatis_MC2_155      GGGS----
TH_1844|M.thermoresistible__bu      T-------
MAB_0738|M.abscessus_ATCC_1997      R-------
MAV_0221|M.avium_104                PGHVELAR