For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MNADVTSCPSTYRTVDPQIQHSVEQFLYAEAELLDQHRYLEWVELFAEDTHYWVPTRMTRPNRERHLEVA GEDEAALIDDDKFFLRGRARRYSSGISWSEEPPSRTRRLITNIRISRRTESNDLEVCSNFYVYRSRLERH QDWFVGERFDVLRAADINTTGYPYVIAARKVVLEQTTLLCPSLSIFL
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_4416 | - | - | 100% (187) | benzene 1,2-dioxygenase |
M. vanbaalenii PYR-1 | Mvan_0534 | - | 5e-21 | 35.09% (171) | 3-phenylpropionate dioxygenase subunit beta |
M. vanbaalenii PYR-1 | Mvan_0547 | - | 1e-20 | 34.09% (176) | aromatic-ring-hydroxylating dioxygenase, beta subunit |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_0631 | - | 4e-21 | 35.09% (171) | 3-phenylpropionate dioxygenase subunit beta |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_4367c | - | 2e-35 | 43.75% (176) | biphenyl dioxygenase beta subunit |
M. marinum M | - | - | - | - | - |
M. avium 104 | MAV_3510 | - | 2e-15 | 30.60% (183) | 3-phenylpropionate dioxygenase subunit beta |
M. smegmatis MC2 155 | MSMEG_1907 | - | 3e-07 | 31.00% (100) | toluate 1,2-dioxygenase beta subunit |
M. thermoresistible (build 8) | TH_3344 | - | 3e-12 | 28.40% (169) | PUTATIVE beta subunit of hydroxylase component of benzoate |
M. ulcerans Agy99 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment Mvan_4416|M.vanbaalenii_PYR-1 -MNADVTSCPSTYRTVDPQIQHSVEQFLYAEAELLDQHRYLEWVELFAED MAB_4367c|M.abscessus_ATCC_199 -MDAKIIPG----ALADRDTHFDVAQFYYSEAELLDEGRYVDWLELLADD Mflv_0631|M.gilvum_PYR-GCK MSATGGEISTRQDAVEKLLLQAEIADFLYREADLLDERRYSEWLGLLTDD MAV_3510|M.avium_104 --MRKPLTCLPFDDAR----HLQAHQFLVDEAYLLDAQHYQAWLDTLTDD TH_3344|M.thermoresistible__bu -----------VAPVPDWVDRFEVEQFLFREARYADESEYDAWEALWTDD MSMEG_1907|M.smegmatis_MC2_155 --------MTTTEKPAKLITQNLIEQFLYREARYLDDREFEKWLECYADD : :* ** * .: * ::* Mvan_4416|M.vanbaalenii_PYR-1 THYWVPTRMTRPNR--ERHLEVAGEDEAALIDDDKFFLRGRARRYSSGIS MAB_4367c|M.abscessus_ATCC_199 VDYWMPLRTNRLRR--QQALSVAARGEAAYYDETKESLAWRIRRFDSGMA Mflv_0631|M.gilvum_PYR-GCK YEYSVPLRANVAYDDLAQLEQTQEGHDICWFDEKKETVALRVEQLMTGLH MAV_3510|M.avium_104 VRYVMPVRVTTARG--AGFDTSPG---MAHFDEDKYSLSQRVARFATEHA TH_3344|M.thermoresistible__bu ALYWVPVDG----------ADSDPRRQMSVIYDNRSRISTRLNHARTGRR MSMEG_1907|M.smegmatis_MC2_155 VVYWMPSWADD-----DRLVEDPQRDISLIYYANKGGLEDRVFRIRTERS * :* : : * : : Mvan_4416|M.vanbaalenii_PYR-1 WSEEPP-SRTRRLITNIRIS-----RRTESNDLEVCSNFYVYRSR-LERH MAB_4367c|M.abscessus_ATCC_199 WAEDPP-SRTRHLITNISVRYAEPDKGAEACDLVARSAFLVYRNR-LERE Mflv_0631|M.gilvum_PYR-GCK WAEEPV-SRVSHLVTNVRIEG------VDGAEVDVSCRFLVYRNR-VADE MAV_3510|M.avium_104 WTEDPP-SRLRHFVTNVRTFV------EDDRHLLVESAELLFRSRGDVNE TH_3344|M.thermoresistible__bu YAASPP-SNLRRLISNIEYVCG-RANPDGGLDVEVEANVLIFESR--IRE MSMEG_1907|M.smegmatis_MC2_155 SATSLPEPRTSHNISNVEVIE----RRGDLVDVRFNWHTMYFRYK----T : . .. : ::*: .: :. : Mvan_4416|M.vanbaalenii_PYR-1 QDWFVGERFDVLRAADINTTGYPYVIAARKVVLEQTTLLCPSLSIFL- MAB_4367c|M.abscessus_ATCC_199 ENIFAGARTDSLRRVDDHR----FLIARRFILLDQNILQAKNICTFF- Mflv_0631|M.gilvum_PYR-GCK TDLLVGRRKDRLRRVAGDWQ-----LCRRRLLLDQTVLLAKNLSIIL- MAV_3510|M.avium_104 SALVSCGREDVLRWSEDRWK-----LARRSIFVDESVLRMQNLAVFL- TH_3344|M.thermoresistible__bu NRLWGGRVTYRIRKTPDGLR-----LAYKKVVLVDNDKPLPTLSFLI- MSMEG_1907|M.smegmatis_MC2_155 VDPYYGTSFYTIDFSGEQP------LIRRKTVVLKNDYIHHVVDIYHF : : : .: .. :