For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. abscessus ATCC 19977 MAB_4367c (-)

annotation: biphenyl dioxygenase beta subunit
coordinates: 4451937 - 4452491
length: 184

DAKIIPGALADRDTHFDVAQFYYSEAELLDEGRYVDWLELLADDVDYWMPLRTNRLRRQQALSVAARGEA
AYYDETKESLAWRIRRFDSGMAWAEDPPSRTRHLITNISVRYAEPDKGAEACDLVARSAFLVYRNRLERE
ENIFAGARTDSLRRVDDHRFLIARRFILLDQNILQAKNICTFF*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. abscessus ATCC 19977MAB_4367c--100% (184)biphenyl dioxygenase beta subunit

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97-----
M. gilvum PYR-GCKMflv_0631-2e-2941.21% (165) 3-phenylpropionate dioxygenase subunit beta
M. tuberculosis H37Rv-----
M. leprae Br4923-----
M. marinum M-----
M. avium 104MAV_3510-3e-2435.47% (172) 3-phenylpropionate dioxygenase subunit beta
M. smegmatis MC2 155MSMEG_1907-4e-0734.04% (94) toluate 1,2-dioxygenase beta subunit
M. thermoresistible (build 8)TH_3344-6e-1330.19% (159) PUTATIVE beta subunit of hydroxylase component of benzoate
M. ulcerans Agy99-----
M. vanbaalenii PYR-1Mvan_4416-3e-3543.75% (176) benzene 1,2-dioxygenase

CLUSTAL 2.0.9 multiple sequence alignment


MAB_4367c|M.abscessus_ATCC_199      -MDAKIIPG----ALADRDTHFDVAQFYYSEAELLDEGRYVDWLELLADD
Mvan_4416|M.vanbaalenii_PYR-1       -MNADVTSCPSTYRTVDPQIQHSVEQFLYAEAELLDQHRYLEWVELFAED
Mflv_0631|M.gilvum_PYR-GCK          MSATGGEISTRQDAVEKLLLQAEIADFLYREADLLDERRYSEWLGLLTDD
MAV_3510|M.avium_104                --MRKPLTCLPFDDAR----HLQAHQFLVDEAYLLDAQHYQAWLDTLTDD
TH_3344|M.thermoresistible__bu      -----------VAPVPDWVDRFEVEQFLFREARYADESEYDAWEALWTDD
MSMEG_1907|M.smegmatis_MC2_155      --------MTTTEKPAKLITQNLIEQFLYREARYLDDREFEKWLECYADD
                                                        :    :*   **   *  .:  *    ::*

MAB_4367c|M.abscessus_ATCC_199      VDYWMPLRTNRLRR--QQALSVAARGEAAYYDETKESLAWRIRRFDSGMA
Mvan_4416|M.vanbaalenii_PYR-1       THYWVPTRMTRPNR--ERHLEVAGEDEAALIDDDKFFLRGRARRYSSGIS
Mflv_0631|M.gilvum_PYR-GCK          YEYSVPLRANVAYDDLAQLEQTQEGHDICWFDEKKETVALRVEQLMTGLH
MAV_3510|M.avium_104                VRYVMPVRVTTARG--AGFDTSPG---MAHFDEDKYSLSQRVARFATEHA
TH_3344|M.thermoresistible__bu      ALYWVPVDG----------ADSDPRRQMSVIYDNRSRISTRLNHARTGRR
MSMEG_1907|M.smegmatis_MC2_155      VVYWMPSWADD-----DRLVEDPQRDISLIYYANKGGLEDRVFRIRTERS
                                      * :*                            :  :  *  :  :   

MAB_4367c|M.abscessus_ATCC_199      WAEDPP-SRTRHLITNISVRYAEPDKGAEACDLVARSAFLVYRNR-LERE
Mvan_4416|M.vanbaalenii_PYR-1       WSEEPP-SRTRRLITNIRIS-----RRTESNDLEVCSNFYVYRSR-LERH
Mflv_0631|M.gilvum_PYR-GCK          WAEEPV-SRVSHLVTNVRIEG------VDGAEVDVSCRFLVYRNR-VADE
MAV_3510|M.avium_104                WTEDPP-SRLRHFVTNVRTFV------EDDRHLLVESAELLFRSRGDVNE
TH_3344|M.thermoresistible__bu      YAASPP-SNLRRLISNIEYVCG-RANPDGGLDVEVEANVLIFESR--IRE
MSMEG_1907|M.smegmatis_MC2_155      SATSLPEPRTSHNISNVEVIE----RRGDLVDVRFNWHTMYFRYK----T
                                     : .   ..  : ::*:              .:        :. :     

MAB_4367c|M.abscessus_ATCC_199      ENIFAGARTDSLRRVDDHR----FLIARRFILLDQNILQAKNICTFF-
Mvan_4416|M.vanbaalenii_PYR-1       QDWFVGERFDVLRAADINTTGYPYVIAARKVVLEQTTLLCPSLSIFL-
Mflv_0631|M.gilvum_PYR-GCK          TDLLVGRRKDRLRRVAGDWQ-----LCRRRLLLDQTVLLAKNLSIIL-
MAV_3510|M.avium_104                SALVSCGREDVLRWSEDRWK-----LARRSIFVDESVLRMQNLAVFL-
TH_3344|M.thermoresistible__bu      NRLWGGRVTYRIRKTPDGLR-----LAYKKVVLVDNDKPLPTLSFLI-
MSMEG_1907|M.smegmatis_MC2_155      VDPYYGTSFYTIDFSGEQP------LIRRKTVVLKNDYIHHVVDIYHF
                                               :             :  :  .: ..      :