For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_3344 | - | - | 100% (168) | beta subunit of hydroxylase component of benzoate 1,2-dioxygenase |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_0663 | - | 5e-13 | 31.90% (163) | aromatic-ring-hydroxylating dioxygenase, beta subunit |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_4367c | - | 5e-13 | 30.19% (159) | biphenyl dioxygenase beta subunit |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | MAV_5083 | - | 3e-67 | 68.86% (167) | beta subunit of hydroxylase component of benzoate |
| M. smegmatis MC2 155 | MSMEG_1907 | - | 3e-12 | 39.13% (92) | toluate 1,2-dioxygenase beta subunit |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_0487 | - | 5e-13 | 31.90% (163) | aromatic-ring-hydroxylating dioxygenase, beta subunit |
CLUSTAL 2.0.9 multiple sequence alignment
TH_3344|M.thermoresistible__bu -----------VAPVP----DWVDRFEVEQFLFREARYADESEYDAWEAL
MAV_5083|M.avium_104 MTASTTSAPGDLGPIP----EGFDRFEVEQFVYREARYADENDYDRWEAL
Mflv_0663|M.gilvum_PYR-GCK ---------MNAVAV-----DRDTREAVEEFMFREAELLDGGQFREWLGL
Mvan_0487|M.vanbaalenii_PYR-1 ---------MNAVAV-----DRDTREAVEEFMFREAELLDGGQFREWLGL
MAB_4367c|M.abscessus_ATCC_199 ---------MDAKIIPGALADRDTHFDVAQFYYSEAELLDEGRYVDWLEL
MSMEG_1907|M.smegmatis_MC2_155 ---------MTTTEKP---AKLITQNLIEQFLYREARYLDDREFEKWLEC
. : : :* : **. * : *
TH_3344|M.thermoresistible__bu WTDDALYWVPVDGADSD--------PRRQMSVIYDNRSRISTRLNHARTG
MAV_5083|M.avium_104 WTDDALYWVPAGPDTAD--------PMRRMSVIFDNRSRISTRLKQVRTG
Mflv_0663|M.gilvum_PYR-GCK LDPDIRYVVPVRTTRED-----SAGWVGAIAHWNDDYTGLEMRVLRGETD
Mvan_0487|M.vanbaalenii_PYR-1 LDPDIRYVVPVRTTRED-----SAGWVGAIAHWNDDYTGLEMRVLRGETD
MAB_4367c|M.abscessus_ATCC_199 LADDVDYWMPLRTNRLRRQQALSVAARGEAAYYDETKESLAWRIRRFDSG
MSMEG_1907|M.smegmatis_MC2_155 YADDVVYWMPSWADDDR---LVEDPQRDISLIYYANKGGLEDRVFRIRTE
* * :* : *: : :
TH_3344|M.thermoresistible__bu RRYAASPP-SNLRRLISNIEYVCGR-ANPDGGLDVEVEANVLIFESRIRE
MAV_5083|M.avium_104 RRYAQAPP-SHVRRLVTNIEWLGGR-PNPGGGADLEVGANFMALESRARD
Mflv_0663|M.gilvum_PYR-GCK FSWAESPR-SRTRHFVSNIRT-----VAGPEADELTVRSNLLFFRSRGDS
Mvan_0487|M.vanbaalenii_PYR-1 FSWAESPR-SRTRHFVSNIRT-----VAGPEADELTVRSNLLFFRSRGDS
MAB_4367c|M.abscessus_ATCC_199 MAWAEDPP-SRTRHLITNISVRYAEPDKGAEACDLVARSAFLVYRNRLER
MSMEG_1907|M.smegmatis_MC2_155 RSSATSLPEPRTSHNISNVEVIE----RRGDLVDVRFNWHTMYFRYKTVD
* .. : ::*: :: : . :
TH_3344|M.thermoresistible__bu --NRLWGGRVTYRIRKTPDG-LRLAYKKVVLVDNDKPLPTLSFLI
MAV_5083|M.avium_104 --SHLWGGRTTYRIRRVGDE-LRLAYKKVVLVDNDKPIPTLGFLI
Mflv_0663|M.gilvum_PYR-GCK GRWELLSAERVDVLRRTDDS-LRLARREVLLDHSTLPIDNLSVVL
Mvan_0487|M.vanbaalenii_PYR-1 GRWELLSAERVDVLRRTDDS-LRLARREVLLDHSTLPIDNLSVVL
MAB_4367c|M.abscessus_ATCC_199 -EENIFAGARTDSLRRVDDHRFLIARRFILLDQNILQAKNICTFF
MSMEG_1907|M.smegmatis_MC2_155 ----PYYGTSFYTIDFSGEQPLIRRKTVVLKNDYIHHVVDIYHF-
. : : : :: . : .