For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
GELTTSIVAAEEGGGTSNFLIPNGTFFVVLLIFLIVLGVIAKWVVPPVSKVLAEREAMLAKTAADNRKSA EQVAAAQADYDKTMADARGEASSIRDEARVAGRQVVDEKRAVASGEVAETVKSADQQLSQQGSAAQSELQ SSVDGLSATLASRILGVDVNSGGSR*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_4332 | - | - | 100% (166) | F0F1 ATP synthase subunit B |
M. vanbaalenii PYR-1 | Mvan_4331 | - | 4e-08 | 20.77% (130) | F0F1 ATP synthase subunit delta |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1338 | atpF | 2e-47 | 56.21% (169) | F0F1 ATP synthase subunit B |
M. gilvum PYR-GCK | Mflv_2314 | - | 8e-76 | 85.38% (171) | F0F1 ATP synthase subunit B |
M. tuberculosis H37Rv | Rv1306 | atpF | 2e-47 | 56.21% (169) | F0F1 ATP synthase subunit B |
M. leprae Br4923 | MLBr_01141 | atpF | 2e-39 | 50.64% (156) | F0F1 ATP synthase subunit B |
M. abscessus ATCC 19977 | MAB_1449 | - | 1e-41 | 54.61% (152) | F0F1 ATP synthase subunit B |
M. marinum M | MMAR_4091 | atpF | 6e-47 | 60.53% (152) | ATP synthase B chain AtpF |
M. avium 104 | MAV_1523 | - | 2e-45 | 57.41% (162) | F0F1 ATP synthase subunit B |
M. smegmatis MC2 155 | MSMEG_4940 | - | 8e-68 | 77.65% (170) | F0F1 ATP synthase subunit B |
M. thermoresistible (build 8) | TH_1562 | - | 3e-47 | 61.33% (150) | bacteriophage lysis protein |
M. ulcerans Agy99 | MUL_3958 | atpF | 1e-45 | 59.21% (152) | F0F1 ATP synthase subunit B |
CLUSTAL 2.0.9 multiple sequence alignment Mvan_4332|M.vanbaalenii_PYR-1 -MGELTTS--------IVAAEEGGGTSNFLIPNGTFFVVLLIFLIVLGVI Mflv_2314|M.gilvum_PYR-GCK -MGDLTSTN---LASAILAAEEGGGTSNFLLPNGTFFAVLLIFLIVLGVI MSMEG_4940|M.smegmatis_MC2_155 -MGEFSAT----ILAASQAAEEGGGGSNFLIPNGTFFAVLIIFLIVLGVI Mb1338|M.bovis_AF2122/97 -MGEVSAI----VLAASQAAEEGGESSNFLIPNGTFFVVLAIFLVVLAVI Rv1306|M.tuberculosis_H37Rv -MGEVSAI----VLAASQAAEEGGESSNFLIPNGTFFVVLAIFLVVLAVI MLBr_01141|M.leprae_Br4923 -MFEVSAI----VFAVSQAAEEG-KSSNFLLPNGTFFFVLAIFLVVLGVI MMAR_4091|M.marinum_M -MDDVNSI----VLAAGQAAEEG-GTNNFLVPNGTFFFVLAIFLVVLAVI MUL_3958|M.ulcerans_Agy99 -MDDVNSI----VLAAGQAAEEG-GTNNFLVPNGTFFFVLAIFLVVLAVI MAV_1523|M.avium_104 MMGDASLS----VLASSQVVAEG--GNNFLVPNGTFFFVLAIFLIVLAVI MAB_1449|M.abscessus_ATCC_1997 -MGELHSVASAVTAVAAEAAEEGGKQNNFLIPNGTFFVVLAIFLIVLAVI TH_1562|M.thermoresistible__bu -----------------VAQEDGGTQN-FLLPNGTFFFTLLIFLIVLGVI . :* . **:****** .* ***:**.** Mvan_4332|M.vanbaalenii_PYR-1 AKWVVPPVSKVLAEREAMLAKTAADNRKSAEQVAAAQADYDKTMADARGE Mflv_2314|M.gilvum_PYR-GCK AKWVVPPISKVLAEREAMLAKTAADNRKSAEQVAAARADYDKTLAEARGE MSMEG_4940|M.smegmatis_MC2_155 SKWVVPPISKVLAEREAMLAKTAADNRKSAEQVAAAQADYEKEMAEARAQ Mb1338|M.bovis_AF2122/97 GTFVVPPILKVLRERDAMVAKTLADNKKSDEQFAAAQADYDEAMTEARVQ Rv1306|M.tuberculosis_H37Rv GTFVVPPILKVLRERDAMVAKTLADNKKSDEQFAAAQADYDEAMTEARVQ MLBr_01141|M.leprae_Br4923 GTFVVPPILKVLQERDAMVAKTDADSKMSAAQFAAAQADYEAAMKEARVQ MMAR_4091|M.marinum_M GTFVVPPILKVLRERDAMVAKTLADNKKSAEQFAAAQADYEKAMAEARVQ MUL_3958|M.ulcerans_Agy99 GTFVVPPILKVLRERDAMVAMTLADNKKSAEQFAAAQADYEKAMAEARVQ MAV_1523|M.avium_104 GTFVVPPVMKVLRERDAMVAKTAADNRKAAEQFEAAQADYEEAMTEARVQ MAB_1449|M.abscessus_ATCC_1997 GTFVVPPIQKVLKAREDMVTKTAEDNRNAAEQFTAAEADYKDELAKARGA TH_1562|M.thermoresistible__bu TKWVVPPINKVLREREAMVQKTAEDNRKSAELAAATEADTRRVLDAARRE .:****: *** *: *: * *.: : *:.** : ** Mvan_4332|M.vanbaalenii_PYR-1 ASSIRDEARVAGRQVVDEKRAVASGEVAETVKSADQQLSQQGSAAQSELQ Mflv_2314|M.gilvum_PYR-GCK ASSIRDEARVAGRQVVDEKRATANGEVAETVKTADEKLTQQGSAAQSELQ MSMEG_4940|M.smegmatis_MC2_155 ASALRDEARAAGRSVVDEKRAQASGEVAQTLTQADQQLSAQGDQVRSGLE Mb1338|M.bovis_AF2122/97 ASSLRDNARADGRKVIEDARVRAEQQVASTLQTAHEQLKRERDAVELDLR Rv1306|M.tuberculosis_H37Rv ASSLRDNARADGRKVIEDARVRAEQQVASTLQTAHEQLKRERDAVELDLR MLBr_01141|M.leprae_Br4923 SSFLRDNARVDGRKSIEEARVRAEQHVVSTLQIAGEQIKRERDAVELDLR MMAR_4091|M.marinum_M ASSYRDNARAEGRKVVEDARAHAEQEVASTLQQANEQLKRERDAVELDLR MUL_3958|M.ulcerans_Agy99 ASSYRHNARAEGRKVVEDARAHAEQEVASTLQQANEQLKRERDAVELDLR MAV_1523|M.avium_104 ASSLRDNARAEGRKVVEDARAKAEQEVLSTLQLAARQLKRERDAVELDLR MAB_1449|M.abscessus_ATCC_1997 ATAVRDEARAEGRGILEDMRQRANAEATAVTETAAAELARQGEVTAGELA TH_1562|M.thermoresistible__bu ASATRDEARNQGRAVLEDMRSRASEEAAATLKTASEELSRQGEATRAELE :: *.:** ** ::: * *. .. . * :: : . . * Mvan_4332|M.vanbaalenii_PYR-1 SSVDGLSATLASRILGVDVN--SGGSR--------- Mflv_2314|M.gilvum_PYR-GCK SSVDALSATLASRILGVDVN--TRGSQ--------- MSMEG_4940|M.smegmatis_MC2_155 SSVDGLSAKLASRILGVDVN--SGGTQ--------- Mb1338|M.bovis_AF2122/97 AHVGTMSATLASRILGVDLT--ASAATR-------- Rv1306|M.tuberculosis_H37Rv AHVGTMSATLASRILGVDLT--ASAATR-------- MLBr_01141|M.leprae_Br4923 AKAGAMSLILASRILGVDIT--ASVVTR-------- MMAR_4091|M.marinum_M ANVGAMSATLANRIVGVDVT--TPAAAG-------- MUL_3958|M.ulcerans_Agy99 ANVGAMSATLANRIVGVDVT--TPAAAG-------- MAV_1523|M.avium_104 ANVASMSATLASRILGVDVA--PAAATTSATKTSGR MAB_1449|M.abscessus_ATCC_1997 TNVDSLSRTLAERVLGVSLS--EPANAGRG------ TH_1562|M.thermoresistible__bu ASVEALSTKLAGRVLGIDVGGRTSATTGQGR----- : . :* ** *::*:.: