For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VPQTTVLAFLAPGQGSQTPGMLAEWLELPGAAQRIQAWSEISGLDLAALGTTASAEEITDTAVTQPLVVA ATLLAYEELTKRDVLGGIEGPVDIVAAGHSVGEIAAYAIAGVISADEAVSLAATRGKEMAKACALEPTGM SALLGGDEAEVLARLEALDLIPANRNAAGQIVAAGAVSALEKLAEDPPSRARVRPLATAGAFHTRYMAPA LDGYATVADRIDPAEPTVTLLSNSDGRPVSSAADAMAKLVAQMTRPVRWDLCTASMKDLGVTAIVEFPPA GTLTGIAKRELRGVPTHAVKSPADLDGLAASFRA
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_3754 | - | - | 100% (314) | (acyl-carrier protein) S-malonyltransferase |
M. vanbaalenii PYR-1 | Mvan_1000 | - | 2e-17 | 29.71% (313) | amino acid adenylation domain-containing protein |
M. vanbaalenii PYR-1 | Mvan_3123 | - | 9e-17 | 30.26% (304) | beta-ketoacyl synthase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2267 | fabD | 1e-124 | 74.01% (304) | acyl-carrier-protein S-malonyltransferase |
M. gilvum PYR-GCK | Mflv_2779 | - | 1e-154 | 89.42% (312) | (acyl-carrier protein) S-malonyltransferase |
M. tuberculosis H37Rv | Rv2243 | fabD | 1e-124 | 74.01% (304) | acyl-carrier-protein S-malonyltransferase |
M. leprae Br4923 | MLBr_01653 | fabD | 1e-114 | 69.18% (305) | malonyl CoA- |
M. abscessus ATCC 19977 | MAB_1879c | - | 1e-123 | 71.75% (308) | putative malonyl CoA-ACP transacylase FabD |
M. marinum M | MMAR_3336 | fabD | 1e-126 | 75.00% (304) | malonyl CoA-acyl carrier protein transacylase FabD |
M. avium 104 | MAV_2194 | - | 1e-125 | 75.00% (304) | malonyl CoA-acyl carrier protein transacylase |
M. smegmatis MC2 155 | MSMEG_4325 | - | 1e-121 | 76.03% (292) | malonyl CoA-acyl carrier protein transacylase |
M. thermoresistible (build 8) | TH_1510 | fabD | 3e-31 | 80.26% (76) | MALONYL CoA-ACYL CARRIER PROTEIN TRANSACYLASE FABD (Malonyl |
M. ulcerans Agy99 | MUL_1306 | fabD | 1e-125 | 74.67% (304) | malonyl CoA-acyl carrier protein transacylase FabD |
CLUSTAL 2.0.9 multiple sequence alignment Mvan_3754|M.vanbaalenii_PYR-1 MPQTTVLAFLAPGQGSQTPGMLAEWLELPGAAQRIQAWSEISGLDLAALG Mflv_2779|M.gilvum_PYR-GCK MPQTTVLAFLAPGQGSQTPGMLTEWLELPGAAERIASWSEISGLDLARLG MMAR_3336|M.marinum_M -----MIALLAPGQGSQTQGMLSPWLELPGAADQIASWSQASGLDLARLG MUL_1306|M.ulcerans_Agy99 -----MIALLAPGQGSQTQGMLSPWLELPGAADQIASWSQASGLDLARLG Mb2267|M.bovis_AF2122/97 -----MIALLAPGQGSQTEGMLSPWLQLPGAADQIAAWSKAADLDLARLG Rv2243|M.tuberculosis_H37Rv -----MIALLAPGQGSQTEGMLSPWLQLPGAADQIAAWSKAADLDLARLG MLBr_01653|M.leprae_Br4923 -----MIALLAPGQGSQTEGMLSPWLGLPGAADQIATWSKASGLDLVRLG MAV_2194|M.avium_104 -----MIALLAPGQGSQTEGMLSPWLELDGAADQLALWSKASGLDLVRLG MAB_1879c|M.abscessus_ATCC_199 -----MIALLAPGQGSQTPGMLTPWLELPGATDQVEQWSKASGLDLVRLG MSMEG_4325|M.smegmatis_MC2_155 --------------------MLTPWLELPGAADRLAAWSQISGLDLTTLG TH_1510|M.thermoresistible__bu -------------------------------------------------- Mvan_3754|M.vanbaalenii_PYR-1 TTASAEEITDTAVTQPLVVAATLLAYEELTKRDVLGGIEGPVDIVAAGHS Mflv_2779|M.gilvum_PYR-GCK TTATAEEITDTAVTQPLVVAATLLAYEELNKRDVLTGDE---KIIAAGHS MMAR_3336|M.marinum_M TTATTEEITDTAVAQPLIVAATLLAHQELIRRGLLND----QEVIVAGHS MUL_1306|M.ulcerans_Agy99 TTATTEEITDTAVAQPLIVAATLLAHQELIRRGLLND----QEVIVAGHS Mb2267|M.bovis_AF2122/97 TTASTEEITDTAVAQPLIVAATLLAHQELARRCVLAG----KDVIVAGHS Rv2243|M.tuberculosis_H37Rv TTASTEEITDTAVAQPLIVAATLLAHQELARRCVLAG----KDVIVAGHS MLBr_01653|M.leprae_Br4923 TTASTEEITDTAVAQPLIVATTLLAHQELAKHALFENAL--DNLIVAGHS MAV_2194|M.avium_104 TTASTEEITDTAVTQPLVVAATLLAHQELTRRGLLAD----ADLVVAGHS MAB_1879c|M.abscessus_ATCC_199 TTATAEEITDTSITQPLVVALTLLAYDELNKRGHLNGKIASGEVIVAGHS MSMEG_4325|M.smegmatis_MC2_155 TTATAEEITDTAVTQPLVVAATLLAHEELTKRGHSAA-----ETIVAGHS TH_1510|M.thermoresistible__bu -------------------------------------------------- Mvan_3754|M.vanbaalenii_PYR-1 VGEIAAYAIAGVISADEAVSLAATRGKEMAKACALEPTGMSALLGGDEAE Mflv_2779|M.gilvum_PYR-GCK VGEIAAYAIAGVISADDAVSLAATRGKEMAKACALEPTGMSALLGGDEAE MMAR_3336|M.marinum_M VGEIAAYAIAGVMAANDAVSLAATRGAEMAKACATEPTGMSALLGGTEDE MUL_1306|M.ulcerans_Agy99 VGEIAAYAIAGVMAANDAVSLAATRGAEMAKACATEPTGMSALLGGTEDE Mb2267|M.bovis_AF2122/97 VGEIAAYAIAGVIAADDAVALAATRGAEMAKACATEPTGMSAVLGGDETE Rv2243|M.tuberculosis_H37Rv VGEIAAYAIAGVIAADDAVALAATRGAEMAKACATEPTGMSAVLGGDETE MLBr_01653|M.leprae_Br4923 VGEIAAYSIAGVIAADDAVALAATRGAEMAKACAIEPTGMSAVLGGDEAD MAV_2194|M.avium_104 VGEIAAYAIAGVMAADDAVALAATRGAEMAKACAVEPTGMSAVLGGDEAE MAB_1879c|M.abscessus_ATCC_199 VGEIAAYAIAGVISADEAITLAATRGAEMAKACALDPTGMSAVLGGDEAE MSMEG_4325|M.smegmatis_MC2_155 VGEIAAYAIAGVISADDAVKLAATRGAEMAKACAVEPTGMAAVLGGDEAE TH_1510|M.thermoresistible__bu --------------------------------VVVDP----AVVG----- . :* *::* Mvan_3754|M.vanbaalenii_PYR-1 VLARLEALDLIPANRNAAGQIVAAGAVSALEKLAEDPPSRARVRPLATAG Mflv_2779|M.gilvum_PYR-GCK VLARLEALDLVPANRNAAGQIVAAGAVAALEKLAEDPPARARVRPLATAG MMAR_3336|M.marinum_M VLSRLEQLDLVPANRNAAGQIVAAGRLTALEKLAEDPPARARVRALGVAG MUL_1306|M.ulcerans_Agy99 VLSRLEQLDLVPANRNAAGQIVAAGRLTALEKLAEDPPARARVRALGVAG Mb2267|M.bovis_AF2122/97 VLSRLEQLDLVPANRNAAGQIVAAGRLTALEKLAEDPPAKARVRALGVAG Rv2243|M.tuberculosis_H37Rv VLSRLEQLDLVPANRNAAGQIVAAGRLTALEKLAEDPPAKARVRALGVAG MLBr_01653|M.leprae_Br4923 VLNRLEELDLVPANRNAAGQIVAAGRLTALEKLAEDPPARARVRALDVAG MAV_2194|M.avium_104 VLARLEQLDLFPANRNAAGQIVAAGSLAALEKLAEDPPAKARVRALGVAG MAB_1879c|M.abscessus_ATCC_199 VLERLEALELVPANRNAVGQIVAAGRITALEKLAEDPPAKARVRQLATAG MSMEG_4325|M.smegmatis_MC2_155 VLARLEALDLVPANRNAAGQIVAAGAVAALDKLAEDPPAKARVRKLATAG TH_1510|M.thermoresistible__bu ----------FPGHRG-----VGDGDQXX--------------------- .*.:*. *. * Mvan_3754|M.vanbaalenii_PYR-1 AFHTRYMAPALDGYATVADRIDPAEPTVTLLSNSDGRPVSSAADAMAKLV Mflv_2779|M.gilvum_PYR-GCK AFHTRYMAPALDEYTRVADRIDPQEPAVTLLSNSDGRPVSGGADALAKLV MMAR_3336|M.marinum_M AFHTQFMAPALEGYAAAAEAIATAEPTATLLSNRDGKPVTSAAAAMQTLV MUL_1306|M.ulcerans_Agy99 AFHTQFMAPALEGYAAAAEAIATAEPTATLLSNRDGKPVTPAAAAMQTLV Mb2267|M.bovis_AF2122/97 AFHTEFMAPALDGFAAAAANIATADPTATLLSNRDGKPVTSAAAAMDTLV Rv2243|M.tuberculosis_H37Rv AFHTEFMAPALDGFAAAAANIATADPTATLLSNRDGKPVTSAAAAMDTLV MLBr_01653|M.leprae_Br4923 AFHTEFMTAALDGFAEAAASITIAEPIAMLLSNRDGKPVASAATGMETLI MAV_2194|M.avium_104 AFHTKYMASALDGYAAAAAAVQTAEPTATLLSNRDGKPVASAAAAMEALV MAB_1879c|M.abscessus_ATCC_199 AFHTHFMAPAQEAYAAAAAAITPSEPTVTLLSNLDGSPVTSGADAMAKLV MSMEG_4325|M.smegmatis_MC2_155 AFHTHYMASALDGYAAAAQSVTTSEPTATLLSNADGQPVASAADAMEKLV TH_1510|M.thermoresistible__bu -------------------------------XNADGQPVASAADAMEKLV * ** **: .* .: *: Mvan_3754|M.vanbaalenii_PYR-1 AQMTRPVRWDLCTASMKDLG----VTAIVEFPPAGTLTGIAKRELRGVPT Mflv_2779|M.gilvum_PYR-GCK AQMTRPVRWDLCTAAMKDLG----VTALVEFPPAGTLTGIAKRELRGTPT MMAR_3336|M.marinum_M SQLTQPVRWDLCTATIREHS----VTAIVEFPPAGTLTGIAKRELRGVPT MUL_1306|M.ulcerans_Agy99 SQLTQPVRWDLCTATIREHS----VTAIVEFPPAGTLTGIAKRELRGVPT Mb2267|M.bovis_AF2122/97 SQLTQPVRWDLCTATLREHT----VTAIVEFPPAGTLSGIAKRELRGVPA Rv2243|M.tuberculosis_H37Rv SQLTQPVRWDLCTATLREHT----VTAIVEFPPAGTLSGIAKRELRGVPA MLBr_01653|M.leprae_Br4923 SQLTHPARWDLCNVTLREHN----VTAIVELPPAGALTGIAKRELREVTT MAV_2194|M.avium_104 AQLTQPVRWDLCTATLRELE----VAAAVEFPPAGTLTGIAKRELRGVSA MAB_1879c|M.abscessus_ATCC_199 NQMTSPVRWDLCTEYFKTANDTPAATAVVELPPSGALSGIAKREMRGVPN MSMEG_4325|M.smegmatis_MC2_155 AQLTKPVRWDLCTATLRDRFQNAESAGIVEFPPAGTLVGIAKRELKGTPT TH_1510|M.thermoresistible__bu AQLTRPVRWDLCTATMRERS----VAALVEFPPAGTLTGIAKRELRGVPT *:* *.*****. :: :. **:**:*:* ******:: .. Mvan_3754|M.vanbaalenii_PYR-1 HAVKSPADLDGLAASFRA Mflv_2779|M.gilvum_PYR-GCK HAVKSPADLDGLRGAW-- MMAR_3336|M.marinum_M HAVKSPADLDELANL--- MUL_1306|M.ulcerans_Agy99 HAVKSPADLDELANL--- Mb2267|M.bovis_AF2122/97 RAVKSPADLDELANL--- Rv2243|M.tuberculosis_H37Rv RAVKSPADLDELANL--- MLBr_01653|M.leprae_Br4923 CAVKSPTDLDKLANL--- MAV_2194|M.avium_104 RAVKSPADLDALAEL--- MAB_1879c|M.abscessus_ATCC_199 HALKTPEDLEALAEL--- MSMEG_4325|M.smegmatis_MC2_155 RAIKSPEDLDGLDQL--- TH_1510|M.thermoresistible__bu RAVKAPNDLDGLTELA-- *:*:* **: *