For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VSMPSDSVVAVAGSSGLIGTALVYALRATDHRVIRIVRRAPSNADEVFWNPDTGEFDADALHDVDAVVNL CGVNVGQKRWSGAFKQSLRDSRIGPTEVLARAVVDAGVPVLVNASAVGYYGDTGGTPVDETAGPGHNFLA RLAVDWEAATIVAARAGVRVVLTRTGLVMARAGGMLSRLRPLFSLGLGARLGNGRQYLSWISLEDQVRAL LFAISHDEMIGPVNMTGPAPVTNAEFTTALGRSVNRPTPLVVPGFALRLALGEFADEGVLGGQRAIPAAL ERAGFQFHHNTIGEALAFATAPNGE
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_3580 | - | - | 100% (305) | hypothetical protein Mvan_3580 |
M. vanbaalenii PYR-1 | Mvan_3512 | - | 4e-61 | 47.28% (294) | hypothetical protein Mvan_3512 |
M. vanbaalenii PYR-1 | Mvan_0427 | - | 1e-06 | 27.44% (266) | NAD-dependent epimerase/dehydratase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2239 | - | 1e-122 | 71.33% (300) | hypothetical protein Mb2239 |
M. gilvum PYR-GCK | Mflv_2934 | - | 1e-155 | 89.84% (305) | hypothetical protein Mflv_2934 |
M. tuberculosis H37Rv | Rv2216 | - | 1e-122 | 71.33% (300) | hypothetical protein Rv2216 |
M. leprae Br4923 | MLBr_00860 | - | 1e-123 | 71.43% (294) | hypothetical protein MLBr_00860 |
M. abscessus ATCC 19977 | MAB_1944c | - | 1e-105 | 63.23% (291) | hypothetical protein MAB_1944c |
M. marinum M | MMAR_3261 | - | 1e-125 | 73.90% (295) | hypothetical protein MMAR_3261 |
M. avium 104 | MAV_2272 | - | 1e-123 | 73.56% (295) | hypothetical protein MAV_2272 |
M. smegmatis MC2 155 | MSMEG_4284 | - | 1e-124 | 72.15% (298) | hypothetical protein MSMEG_4284 |
M. thermoresistible (build 8) | TH_0221 | - | 1e-124 | 73.56% (295) | CONSERVED HYPOTHETICAL PROTEIN |
M. ulcerans Agy99 | MUL_3576 | - | 1e-124 | 73.47% (294) | hypothetical protein MUL_3576 |
CLUSTAL 2.0.9 multiple sequence alignment Mvan_3580|M.vanbaalenii_PYR-1 MSMPS-DSVVAVAGSSGLIGTALVYALRATDHRVIRIVRRAPSNADEVFW Mflv_2934|M.gilvum_PYR-GCK MSMRS-DSVVAIAGSSGLIGTALVYALRATDHRVIRIVRRAPSNADEVFW MMAR_3261|M.marinum_M MGK----AVVAIAGSSGLIGSALAAALRAADHRVLRIVRRTPANSEELHW MUL_3576|M.ulcerans_Agy99 MGK----AVVAIAGSSGLIGSALAAALRAADHRVLRIVRRTPANSEELHW Mb2239|M.bovis_AF2122/97 MAN----AVVAIAGSSGLIGSALTAALRAADHTVLRIVRRAPANSEELHW Rv2216|M.tuberculosis_H37Rv MAN----AVVAIAGSSGLIGSALTAALRAADHTVLRIVRRAPANSEELHW MLBr_00860|M.leprae_Br4923 MAQASRKAVVAIAGSSGMIGSALAAALRANDHLVLRIVRRTPANAEELHW MAV_2272|M.avium_104 MARAGQKAVIAIAGSSGLIGSALAAALRADDHRVLRIVRRAPANGDELSW TH_0221|M.thermoresistible__bu ------MAVIAIAGSSGLIGSALVYALRAADHRVLRIVRRAPANPDELFW MSMEG_4284|M.smegmatis_MC2_155 MAD----AVIAIAGSSGLIGSALTSALRADGHRVLRLVRRAPSNPDELFW MAB_1944c|M.abscessus_ATCC_199 MGAESQHKRIVIAGSSGVIGSALVASLRSANHTVVRLVRRDPMGPDERRW :.:*****:**:**. :**: .* *:*:*** * . :* * Mvan_3580|M.vanbaalenii_PYR-1 NPDTGEFDADALHDVDAVVNLCGVNVGQKRWSGAFKQSLRDSRIGPTEVL Mflv_2934|M.gilvum_PYR-GCK NPDTGEFDATALDGVDAVVNLCGVNVGQKRWSGAFKQSLRDSRIGPTEVL MMAR_3261|M.marinum_M NPESGEFDPDALTDVDVVINLCGVGIGRRRWSGAFKQSLRDSRITPTEVL MUL_3576|M.ulcerans_Agy99 NPESGEFDPDALTDVDVVINLCGVGIGRRRWSGAFKQSLRDSRITPTEVL Mb2239|M.bovis_AF2122/97 NPESGEFDPHALTDVDAVVNLCGVNIAQRRWSGAFKQSLRDSRITPTEVL Rv2216|M.tuberculosis_H37Rv NPESGEFDPHALTDVDAVVNLCGVNIAQRRWSGAFKQSLRDSRITPTEVL MLBr_00860|M.leprae_Br4923 NPESGEFDTDAITDVDAVVNLCGVNLGQRRWSGSFKQNLRDSRITPTEVL MAV_2272|M.avium_104 NPESGDLDPDALRGVDAVVNLCGVNIGKRRWSGAFKQSLRDSRITPTEVL TH_0221|M.thermoresistible__bu NPDSGEFDADRLRGVDAVVNLCGVNIGARRWSGSFKQQLRDSRITPTEVL MSMEG_4284|M.smegmatis_MC2_155 NPDTGEFDATALHGVDVVVNLCGVNLGDKRWSGAFKQSLRDSRIGPTEVL MAB_1944c|M.abscessus_ATCC_199 DPASGQIEPGGLDGADAVVNMCGVGVGDKRWSGAYKQEIYDSRVIPTEVL :* :*:::. : ..*.*:*:***.:. :****::**.: ***: ***** Mvan_3580|M.vanbaalenii_PYR-1 ARAVVDAGVPVLVNASAVGYYGDTGGTPVDETAGPGHNFLARLAVDWEAA Mflv_2934|M.gilvum_PYR-GCK ANAVVEAQVPVLVNASAVGFYGDTGSTPVDETAGPGQNFLARLAIDWEAA MMAR_3261|M.marinum_M SSAVADAGVPTLINASAVGYYGDTRDRVVDENDPAGMGFLAQLCVDWEAA MUL_3576|M.ulcerans_Agy99 SSAVADAGVPTLINASAVGYYGDTRDRVVDENDPAGMGFLAQLCVDWEAA Mb2239|M.bovis_AF2122/97 SAAVADAGVATLINASAVGYYGNTKDRVVDENDSAGTGFLAQLCVDWETA Rv2216|M.tuberculosis_H37Rv SAAVADAGVATLINASAVGYYGNTKDRVVDENDSAGTGFLAQLCVDWETA MLBr_00860|M.leprae_Br4923 SAAVAEAGVKTFINASAVGYYGNTRDRVVDENDRAGTGFLAQLCQDWEGA MAV_2272|M.avium_104 AHAVADAGVATLVNASAVGFYGNTKDRVVDENDRAGTGFLAQLCQDWEAA TH_0221|M.thermoresistible__bu TAAVVEAGVPVLVNASAVGVYGDTRDRAVDESAPPGQGFLARLCQDWEAA MSMEG_4284|M.smegmatis_MC2_155 SAAVADAGVPVLINASAVGFYGDTRDRITDESAPAGQGFLATLCQDWEAA MAB_1944c|M.abscessus_ATCC_199 ARAVAEAGVPVLINASAVGYYGDSGDRIIDETASSGTSFLARVCLDWEAA : **.:* * .::****** **:: . **. .* .*** :. *** * Mvan_3580|M.vanbaalenii_PYR-1 TIVAARAGVRVVLTRTGLVMARAGGMLSRLRPLFSLGLGARLGNGRQYLS Mflv_2934|M.gilvum_PYR-GCK TTVASQSGVRVVLTRTGLVMAPSGGMLSRLRLLFSLGLGARLGNGRQYLS MMAR_3261|M.marinum_M TLPAQYAGTRVVLARTGLVLAPAGGTLRPLRPAFSVGLGARLGSGRQYMA MUL_3576|M.ulcerans_Agy99 TLPAQYAGTRVVLARTGLVLAPAGGTLRPLRPAFSVGLGARLGSGRQYMA Mb2239|M.bovis_AF2122/97 TRPAQQSGARVVLARTGVVLSPAGGMLRRMRPLFSVGLGARLGSGRQYMS Rv2216|M.tuberculosis_H37Rv TRPAQQSGARVVLARTGVVLSPAGGMLRRMRPLFSVGLGARLGSGRQYMS MLBr_00860|M.leprae_Br4923 TLPAQYAGTRVILARTGMVLAQEAGVLSRMRPLFSFALGARIGNGRQYMS MAV_2272|M.avium_104 TLPAQYGGARVVLARTGLVFSPAGGALGRLRPLFRTGLGARLGSGRQYMS TH_0221|M.thermoresistible__bu TTPARQAGVRVVLARTGLVVSPSGGLLSRLRPLFAAGLGARLGSGCQYMS MSMEG_4284|M.smegmatis_MC2_155 TAQAVAAGTRVVLLRTGLVLARSGGLIGRLKPLFSFGLGARLGNGRQYMP MAB_1944c|M.abscessus_ATCC_199 TAEAAQAGARVVIVRTGLVLSPAGGLFGRSRPLFSLGLGARLGNGRWYMP * * .*.**:: ***:*.: .* : : * .****:*.* *:. Mvan_3580|M.vanbaalenii_PYR-1 WISLEDQVRALLFAISHDEMIGPVNMTGPAPVTNAEFTTALGRSVNRPTP Mflv_2934|M.gilvum_PYR-GCK WISLEDQVRALLFAISHHELAGPVNVTGPAPVTNAEFTTALGRALNRPTP MMAR_3261|M.marinum_M WISLEDEVRALLFAISNPTLSGPVNMAGPAPVTNAEFTTAFGRALNRPTP MUL_3576|M.ulcerans_Agy99 WISLEDEVRALLFAISNPTLSGPVNMAGPAPVTNAEFTTAFGRALNRPTP Mb2239|M.bovis_AF2122/97 WISLEDEVRALQFAIAQPNLSGPVNLTGPAPVTNAEFTTAFGRAVNRPTP Rv2216|M.tuberculosis_H37Rv WISLEDEVRALQFAIAQPNLSGPVNLTGPAPVTNAEFTTAFGRAVNRPTP MLBr_00860|M.leprae_Br4923 WISLEDEVRALLFAISHQSLSGPLNLTGPAPVTNAEFTTAFGRAINRPTP MAV_2272|M.avium_104 WITLEDEVRALLFAIFEPALSGPVNMTGPAPVTNAEFTTAFGRAVNRPTP TH_0221|M.thermoresistible__bu WISLEDEVRALQRLLTDDALSGPVNLTGPAPVTNAEFTAALGRALNRPAP MSMEG_4284|M.smegmatis_MC2_155 WISLDDHIRAVRFTMDNDTMSGPVNVTGPAPVTNAEFTSVLGRTLGRPTP MAB_1944c|M.abscessus_ATCC_199 WISLEDHIRALEFALAEPAVSGPVNLTGPAPVTNAEFTAALGRVLHRPTL **:*:*.:**: : . : **:*::***********:.:** : **: Mvan_3580|M.vanbaalenii_PYR-1 LVVPGFALRLALGEFADEGVLGGQRAIPAALERAGFQFHHNTIGEALAFA Mflv_2934|M.gilvum_PYR-GCK LAVPGFVLRAALGEFADEGVLGGQRAIPAALERAGFQFHHHTIGEALAFA MMAR_3261|M.marinum_M LMLPGFAARAALGEFADEGLLIGQRAIPTALEQAGFQFHHNTIGEALSYA MUL_3576|M.ulcerans_Agy99 LMLPGFAARAVLGEFADEGLLIGQRAIPTALEQAGFQFHHNTIGEALSYA Mb2239|M.bovis_AF2122/97 LMLPSVAVRAAFGEFADEGLLIGQRAIPSALERAGFQFHHNTIGEALGYA Rv2216|M.tuberculosis_H37Rv LMLPSVAVRAAFGEFADEGLLIGQRAIPSALERAGFQFHHNTIGEALGYA MLBr_00860|M.leprae_Br4923 LMLPSFAVRAALGEFADEGLLIGQRAIPAALERAGFQFHHNTIGEALSYA MAV_2272|M.avium_104 LMLPGFAVRAALGEFADEGLLTGQRAIPAALERTGFVFHHNTIGEALGYA TH_0221|M.thermoresistible__bu WVLPGVAVRALLGEFAEEGVLAGQRVVPAALEAAGFGFRHNTIGAALAYA MSMEG_4284|M.smegmatis_MC2_155 LFVPAVALRTLLGEFADEGLLAGQRAIPAALEIKGFEFHHKTVREALAHV MAB_1944c|M.abscessus_ATCC_199 LVAPQFALSLIFGEFADAELTSSMRVIPAVLEQHGFEFEHHTIGEALAYA * .. :****: : . *.:*:.** ** *.*:*: **... Mvan_3580|M.vanbaalenii_PYR-1 TAPNGE- Mflv_2934|M.gilvum_PYR-GCK TAPQRE- MMAR_3261|M.marinum_M TARRDQI MUL_3576|M.ulcerans_Agy99 TERRDQI Mb2239|M.bovis_AF2122/97 TTRPG-- Rv2216|M.tuberculosis_H37Rv TTRPG-- MLBr_00860|M.leprae_Br4923 TTRPSQN MAV_2272|M.avium_104 TARPAHD TH_0221|M.thermoresistible__bu TAGPDAR MSMEG_4284|M.smegmatis_MC2_155 TAPKEP- MAB_1944c|M.abscessus_ATCC_199 NNSRPMK .