For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTGPYPPPYGAGPAGPQMYPEPYPPQTYPPLGATYPGTLPPPVQYPKRRRPWIIAVVAAVAVLAVVGVVA AVALTGSRDEAAPSGALTEASAQTAIQDYLDALTNADVETVARHTLCGLYDAVNERRSDLALANLSSDAF RKQYESAEVTSIDKMVLSSPSQAQVLFTMRVTPAGGSSRNQPQQADEQAVAQLLSIDDEVLVCSYLPRTA GQY
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_3567 | - | - | 100% (213) | hypothetical protein Mvan_3567 |
| M. vanbaalenii PYR-1 | Mvan_4096 | - | 1e-07 | 40.54% (74) | hypothetical protein Mvan_4096 |
| M. vanbaalenii PYR-1 | Mvan_0671 | - | 2e-06 | 26.35% (167) | hypothetical protein Mvan_0671 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2226 | - | 2e-47 | 47.68% (237) | hypothetical protein Mb2226 |
| M. gilvum PYR-GCK | Mflv_2946 | - | 3e-93 | 75.78% (223) | hypothetical protein Mflv_2946 |
| M. tuberculosis H37Rv | Rv2203 | - | 3e-47 | 47.68% (237) | hypothetical protein Rv2203 |
| M. leprae Br4923 | MLBr_00872 | - | 4e-40 | 47.73% (176) | hypothetical protein MLBr_00872 |
| M. abscessus ATCC 19977 | MAB_1958c | - | 3e-22 | 36.07% (183) | hypothetical protein MAB_1958c |
| M. marinum M | MMAR_3247 | - | 8e-45 | 45.73% (234) | hypothetical protein MMAR_3247 |
| M. avium 104 | MAV_2288 | - | 6e-43 | 44.16% (231) | hypothetical protein MAV_2288 |
| M. smegmatis MC2 155 | MSMEG_4271 | - | 1e-55 | 58.45% (207) | hypothetical protein MSMEG_4271 |
| M. thermoresistible (build 8) | TH_3594 | - | 3e-53 | 54.69% (192) | PUTATIVE hypothetical protein Mflv_2946 |
| M. ulcerans Agy99 | MUL_3560 | - | 8e-43 | 46.61% (221) | hypothetical protein MUL_3560 |
CLUSTAL 2.0.9 multiple sequence alignment
Mb2226|M.bovis_AF2122/97 MPGPHSPNPGVGTNGPAPYPEPSSHEPQALDYPHDLGAAEPAFAPGPADD
Rv2203|M.tuberculosis_H37Rv MPGPHSPNPGVGTNGPAPYPEPSSHEPQALDYPHDLGAAEPAFAPGPADD
MMAR_3247|M.marinum_M MAGPHPSNPAVSTEGPMPYPENGPNEP--LEYPHDLGGAEPAFGTPPADG
MUL_3560|M.ulcerans_Agy99 ----------------MPYPENGPNEP--LEYPHDLGGAEPAFGVPPADG
MLBr_00872|M.leprae_Br4923 --------------------------------------------------
MAV_2288|M.avium_104 MAGPHSPNHTVGGQGPTP-----PSESQPLEFPDHPNAGDTGYAAAPQAP
Mvan_3567|M.vanbaalenii_PYR-1 MTGPYPPPYGAGPAGPQMYPEPYPPQT----Y-PPLGATYP---------
Mflv_2946|M.gilvum_PYR-GCK MTGPYPPPYGAGPAGPQMYPEPYPQQS----Y-PPYAAPYPDGGPG----
TH_3594|M.thermoresistible__bu --------------------VPYP---------EPAGSAYP---------
MSMEG_4271|M.smegmatis_MC2_155 MTDVQITRGAFLMTGSYQYPESVPPQQ----YPEQIPSAYP---------
MAB_1958c|M.abscessus_ATCC_199 ------------MAEPGYSTVPYPGLP-----------------------
Mb2226|M.bovis_AF2122/97 AALPPAAYPGVPPQVS-YPKRRHKR-LLIGIVVALALVSA-MTAAIIYGV
Rv2203|M.tuberculosis_H37Rv AALPPAAYPGVPPQVS-YPKRRHKR-LLIGIVVALALVSA-MTAAIIYGV
MMAR_3247|M.marinum_M PPRLPVSYPGLPPAPGGYRNRRPRR-LLIGTLLALALVGA-LTATIVYGV
MUL_3560|M.ulcerans_Agy99 PPRLPVSYPGLPPAPGGYRNRRPKR-LLIGTLLALALVGA-LTATIVYGV
MLBr_00872|M.leprae_Br4923 ---------MLPPAVS-YPRRRSKR-LIISVLVAIALVAA-MTAVIIYGV
MAV_2288|M.avium_104 PG--SANYAGPPPAPAPYPPRRSKRRLIVGLALAVALVAV-MTVAIVYGV
Mvan_3567|M.vanbaalenii_PYR-1 --------GTLPPPVQYPKRRR-PWIIAVVAAVAVLAVVG-VVAAVALTG
Mflv_2946|M.gilvum_PYR-GCK ----PVYPGALPPPVQYPKRRRSPWIIVAVALAAVVAVGA-VITGVTLAA
TH_3594|M.thermoresistible__bu --------GMLPPPVQYP-GRR--WRRVLTVLAVIGVVVG-AGAAVVFAT
MSMEG_4271|M.smegmatis_MC2_155 --------GMLPPPVPYPKRRR--WPKVLAAVLAVAVLAG-VVTAVVQVT
MAB_1958c|M.abscessus_ATCC_199 ---------PMPPPVDYPERKR----KVPGWLAPAAVVAALLILALVLGF
** :* : :
Mb2226|M.bovis_AF2122/97 RTNGANTAGTFSEGPAKTAIQGYLNALENRDVDTIVRNALCGIHDGVRDK
Rv2203|M.tuberculosis_H37Rv RTNGANTAGTFSEGPAKTAIQGYLNALENRDVDTIVRNALCGIHDGVRDK
MMAR_3247|M.marinum_M RTNGTNSSGTLSEGAAKTAIQGYLNALEHRDVDVIVRNALCGIYDGVKDK
MUL_3560|M.ulcerans_Agy99 RTNGTNSSGTLSEGAAKTAIQGYLNALEHRDVDVIVRNALCGIYNGVKDK
MLBr_00872|M.leprae_Br4923 RTNGSKTGGTFSEVTAKTAIEDYLKALEQSNINTIARNALCGMYDSVRDQ
MAV_2288|M.avium_104 RTNGANTGATFSEGAAKTAIQGYLDALEHRDIDEIARNALCGLYDGVQDK
Mvan_3567|M.vanbaalenii_PYR-1 SRDEAAPSGALTEASAQTAIQDYLDALTNADVETVARHTLCGLYDAVNER
Mflv_2946|M.gilvum_PYR-GCK GREDQGATGTLTETSARAAIQDYLDALTDGDDERVARHTLCGLFDAVKER
TH_3594|M.thermoresistible__bu RGGSGRPGAGFTETAARAEIQRYLDALADGDDETVARHALCGMYDEVKQR
MSMEG_4271|M.smegmatis_MC2_155 R-SSGSESGVVTETQARDAIQEYLSALIDADDETVARHTMCGLFDAVRDR
MAB_1958c|M.abscessus_ATCC_199 LTKNSGVSQRPSEAKIEQTIQAYLDAMARLDTVTLARNAGCGLYDAVRDK
:* . *: **.*: : :.*:: **:.: *.::
Mb2226|M.bovis_AF2122/97 RSDQALAKLSSDAFRKQFSQVEVTSIDKIVYWSQYQAQVLFTMQVTPAAG
Rv2203|M.tuberculosis_H37Rv RSDQALAKLSSDAFRKQFSQVEVTSIDKIVYWSQYQAQVLFTMQVTPAAG
MMAR_3247|M.marinum_M RSDQALAKLSSDAFRKQFSQADVTSIDKIVYWSQYQAQVLFTMQVTPATG
MUL_3560|M.ulcerans_Agy99 RSDQALAKLSSDAFRKQFSQADVTSIDEIVYWSQYQAQVLFTMQVTPATG
MLBr_00872|M.leprae_Br4923 RPDQALAQLSSDAFRKQFSQVELTSIDQIVYWSPYQAQVLFTMRTSPATG
MAV_2288|M.avium_104 RSDQALAKLSSDAFRKQFSEVQVTSIDKIVYLSQYQAQALFSMRVSPVSG
Mvan_3567|M.vanbaalenii_PYR-1 RSDLALANLSSDAFRKQYESAEVTSIDKMVLSSPSQAQVLFTMRVTPAGG
Mflv_2946|M.gilvum_PYR-GCK RSDLALANLSSDAFRKQYDSAEVTSIDKMVRSSPTQAQVLFTMRVVPASG
TH_3594|M.thermoresistible__bu RSDLEVATLNSDAFRKQYDRAEVTGIDKMVRLSVNQARVLFSMRVVPAGG
MSMEG_4271|M.smegmatis_MC2_155 KADLAVASLAGDTFRKQFGNVEVTSIDKIVPWSTTQAQVLFTMRVAPARS
MAB_1958c|M.abscessus_ATCC_199 DTDDTIVRANAQQFVATFGTATVKSIDKIVYFSQYQLKVLFTATSQ----
.* :. .: * : . :..**::* * * :.**:
Mb2226|M.bovis_AF2122/97 G-----PPRGQVQGIAQLLFQR----GQVLVCSYVLRTAGSY
Rv2203|M.tuberculosis_H37Rv G-----PPRGQVQGIAQLLFQR----GQVLVCSYVLRTAGSY
MMAR_3247|M.marinum_M G-----PPKGQVQGIAQLLFQR----GQIMVCSYVLRTAGQY
MUL_3560|M.ulcerans_Agy99 G-----PPNGQVQGIAQLLFQR----GQIMVCSYVLRTAGQY
MLBr_00872|M.leprae_Br4923 G-----PKRRQIQGIAQLLYRR----NQVLVCSYMLRTADSH
MAV_2288|M.avium_104 G-----PARGQVQGIAQLLFQR----GQIMVCSYVLRTGGSY
Mvan_3567|M.vanbaalenii_PYR-1 SSRNQ-PQQADEQAVAQLLSID----DEVLVCSYLPRTAGQY
Mflv_2946|M.gilvum_PYR-GCK SSRNA-PQEADEQAVAQVLSID----DEVLVCSYLPRTAGQY
TH_3594|M.thermoresistible__bu TSARE-PAETEVQGIAELLYQD----NEILVCNYLVRTGSQY
MSMEG_4271|M.smegmatis_MC2_155 SSRGQRPPAEEQQGVAQLLVDKTDGGDDVLVCSYVLRTGGQY
MAB_1958c|M.abscessus_ATCC_199 ------KRKDAPQGQAELLLNE----GKIYVCSAYMRGANAY
*. *::* ..: **. * .. :