For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VTDVQITRGAFLMTGSYQYPESVPPQQYPEQIPSAYPGMLPPPVPYPKRRRWPKVLAAVLAVAVLAGVVT AVVQVTRSSGSESGVVTETQARDAIQEYLSALIDADDETVARHTMCGLFDAVRDRKADLAVASLAGDTFR KQFGNVEVTSIDKIVPWSTTQAQVLFTMRVAPARSSSRGQRPPAEEQQGVAQLLVDKTDGGDDVLVCSYV LRTGGQY
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_4271 | - | - | 100% (217) | hypothetical protein MSMEG_4271 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2226 | - | 4e-43 | 48.92% (186) | hypothetical protein Mb2226 |
M. gilvum PYR-GCK | Mflv_2946 | - | 8e-54 | 53.49% (215) | hypothetical protein Mflv_2946 |
M. tuberculosis H37Rv | Rv2203 | - | 4e-43 | 48.92% (186) | hypothetical protein Rv2203 |
M. leprae Br4923 | MLBr_00872 | - | 3e-39 | 44.44% (180) | hypothetical protein MLBr_00872 |
M. abscessus ATCC 19977 | MAB_1958c | - | 4e-21 | 37.84% (185) | hypothetical protein MAB_1958c |
M. marinum M | MMAR_3247 | - | 8e-42 | 44.10% (195) | hypothetical protein MMAR_3247 |
M. avium 104 | MAV_2288 | - | 3e-37 | 45.65% (184) | hypothetical protein MAV_2288 |
M. thermoresistible (build 8) | TH_3594 | - | 2e-48 | 53.65% (192) | PUTATIVE hypothetical protein Mflv_2946 |
M. ulcerans Agy99 | MUL_3560 | - | 3e-41 | 43.37% (196) | hypothetical protein MUL_3560 |
M. vanbaalenii PYR-1 | Mvan_3567 | - | 1e-55 | 58.45% (207) | hypothetical protein Mvan_3567 |
CLUSTAL 2.0.9 multiple sequence alignment Mb2226|M.bovis_AF2122/97 MPGPHSPNPGVGTNGPAPYPEPSSHEPQALDYPHDLGAAEPAFAPGPADD Rv2203|M.tuberculosis_H37Rv MPGPHSPNPGVGTNGPAPYPEPSSHEPQALDYPHDLGAAEPAFAPGPADD MMAR_3247|M.marinum_M MAGPHPSNPAVSTEGPMPYPENGPNEP--LEYPHDLGGAEPAFGTPPADG MUL_3560|M.ulcerans_Agy99 ----------------MPYPENGPNEP--LEYPHDLGGAEPAFGVPPADG MLBr_00872|M.leprae_Br4923 -------------------------------------------------- MAV_2288|M.avium_104 MAGPHSPNHTVGGQGPTP-----PSESQPLEFPDHPNAGDTGYAAAPQAP Mflv_2946|M.gilvum_PYR-GCK MTGPYPPPYGAGPAGPQMYPEPYPQQS----Y-PPYAAPYPDGGPG---- Mvan_3567|M.vanbaalenii_PYR-1 MTGPYPPPYGAGPAGPQMYPEPYPPQT----Y-PPLGATYP--------- TH_3594|M.thermoresistible__bu --------------------VPYP---------EPAGSAYP--------- MSMEG_4271|M.smegmatis_MC2_155 MTDVQITRGAFLMTGSYQYPESVPPQQ----YPEQIPSAYP--------- MAB_1958c|M.abscessus_ATCC_199 ------------MAEPGYSTVPYPGLP----------------------- Mb2226|M.bovis_AF2122/97 AALPPAAYPGVPPQVS-YPKRRHKR-LLIGIVVALALVSA-MTAAIIYGV Rv2203|M.tuberculosis_H37Rv AALPPAAYPGVPPQVS-YPKRRHKR-LLIGIVVALALVSA-MTAAIIYGV MMAR_3247|M.marinum_M PPRLPVSYPGLPPAPGGYRNRRPRR-LLIGTLLALALVGA-LTATIVYGV MUL_3560|M.ulcerans_Agy99 PPRLPVSYPGLPPAPGGYRNRRPKR-LLIGTLLALALVGA-LTATIVYGV MLBr_00872|M.leprae_Br4923 ---------MLPPAVS-YPRRRSKR-LIISVLVAIALVAA-MTAVIIYGV MAV_2288|M.avium_104 PG--SANYAGPPPAPAPYPPRRSKRRLIVGLALAVALVAV-MTVAIVYGV Mflv_2946|M.gilvum_PYR-GCK ----PVYPGALPPPVQYPKRRRSPWIIVAVALAAVVAVGA-VITGVTLAA Mvan_3567|M.vanbaalenii_PYR-1 --------GTLPPPVQYPKRRR-PWIIAVVAAVAVLAVVG-VVAAVALTG TH_3594|M.thermoresistible__bu --------GMLPPPVQYP-GRR--WRRVLTVLAVIGVVVG-AGAAVVFAT MSMEG_4271|M.smegmatis_MC2_155 --------GMLPPPVPYPKRRR--WPKVLAAVLAVAVLAG-VVTAVVQVT MAB_1958c|M.abscessus_ATCC_199 ---------PMPPPVDYPERKR----KVPGWLAPAAVVAALLILALVLGF ** :* : : Mb2226|M.bovis_AF2122/97 RTNGANTAGTFSEGPAKTAIQGYLNALENRDVDTIVRNALCGIHDGVRDK Rv2203|M.tuberculosis_H37Rv RTNGANTAGTFSEGPAKTAIQGYLNALENRDVDTIVRNALCGIHDGVRDK MMAR_3247|M.marinum_M RTNGTNSSGTLSEGAAKTAIQGYLNALEHRDVDVIVRNALCGIYDGVKDK MUL_3560|M.ulcerans_Agy99 RTNGTNSSGTLSEGAAKTAIQGYLNALEHRDVDVIVRNALCGIYNGVKDK MLBr_00872|M.leprae_Br4923 RTNGSKTGGTFSEVTAKTAIEDYLKALEQSNINTIARNALCGMYDSVRDQ MAV_2288|M.avium_104 RTNGANTGATFSEGAAKTAIQGYLDALEHRDIDEIARNALCGLYDGVQDK Mflv_2946|M.gilvum_PYR-GCK GREDQGATGTLTETSARAAIQDYLDALTDGDDERVARHTLCGLFDAVKER Mvan_3567|M.vanbaalenii_PYR-1 SRDEAAPSGALTEASAQTAIQDYLDALTNADVETVARHTLCGLYDAVNER TH_3594|M.thermoresistible__bu RGGSGRPGAGFTETAARAEIQRYLDALADGDDETVARHALCGMYDEVKQR MSMEG_4271|M.smegmatis_MC2_155 R-SSGSESGVVTETQARDAIQEYLSALIDADDETVARHTMCGLFDAVRDR MAB_1958c|M.abscessus_ATCC_199 LTKNSGVSQRPSEAKIEQTIQAYLDAMARLDTVTLARNAGCGLYDAVRDK :* . *: **.*: : :.*:: **:.: *.:: Mb2226|M.bovis_AF2122/97 RSDQALAKLSSDAFRKQFSQVEVTSIDKIVYWSQYQAQVLFTMQVTPAAG Rv2203|M.tuberculosis_H37Rv RSDQALAKLSSDAFRKQFSQVEVTSIDKIVYWSQYQAQVLFTMQVTPAAG MMAR_3247|M.marinum_M RSDQALAKLSSDAFRKQFSQADVTSIDKIVYWSQYQAQVLFTMQVTPATG MUL_3560|M.ulcerans_Agy99 RSDQALAKLSSDAFRKQFSQADVTSIDEIVYWSQYQAQVLFTMQVTPATG MLBr_00872|M.leprae_Br4923 RPDQALAQLSSDAFRKQFSQVELTSIDQIVYWSPYQAQVLFTMRTSPATG MAV_2288|M.avium_104 RSDQALAKLSSDAFRKQFSEVQVTSIDKIVYLSQYQAQALFSMRVSPVSG Mflv_2946|M.gilvum_PYR-GCK RSDLALANLSSDAFRKQYDSAEVTSIDKMVRSSPTQAQVLFTMRVVPASG Mvan_3567|M.vanbaalenii_PYR-1 RSDLALANLSSDAFRKQYESAEVTSIDKMVLSSPSQAQVLFTMRVTPAGG TH_3594|M.thermoresistible__bu RSDLEVATLNSDAFRKQYDRAEVTGIDKMVRLSVNQARVLFSMRVVPAGG MSMEG_4271|M.smegmatis_MC2_155 KADLAVASLAGDTFRKQFGNVEVTSIDKIVPWSTTQAQVLFTMRVAPARS MAB_1958c|M.abscessus_ATCC_199 DTDDTIVRANAQQFVATFGTATVKSIDKIVYFSQYQLKVLFTATSQ---- .* :. .: * : . :..**::* * * :.**: Mb2226|M.bovis_AF2122/97 G-----PPRGQVQGIAQLLFQR----GQVLVCSYVLRTAGSY Rv2203|M.tuberculosis_H37Rv G-----PPRGQVQGIAQLLFQR----GQVLVCSYVLRTAGSY MMAR_3247|M.marinum_M G-----PPKGQVQGIAQLLFQR----GQIMVCSYVLRTAGQY MUL_3560|M.ulcerans_Agy99 G-----PPNGQVQGIAQLLFQR----GQIMVCSYVLRTAGQY MLBr_00872|M.leprae_Br4923 G-----PKRRQIQGIAQLLYRR----NQVLVCSYMLRTADSH MAV_2288|M.avium_104 G-----PARGQVQGIAQLLFQR----GQIMVCSYVLRTGGSY Mflv_2946|M.gilvum_PYR-GCK SSRNA-PQEADEQAVAQVLSID----DEVLVCSYLPRTAGQY Mvan_3567|M.vanbaalenii_PYR-1 SSRNQ-PQQADEQAVAQLLSID----DEVLVCSYLPRTAGQY TH_3594|M.thermoresistible__bu TSARE-PAETEVQGIAELLYQD----NEILVCNYLVRTGSQY MSMEG_4271|M.smegmatis_MC2_155 SSRGQRPPAEEQQGVAQLLVDKTDGGDDVLVCSYVLRTGGQY MAB_1958c|M.abscessus_ATCC_199 ------KRKDAPQGQAELLLNE----GKIYVCSAYMRGANAY *. *::* ..: **. * .. :