For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
RPDLDVELGFSTHLPPSRLPLVCCLVAFILTFFITRTIVRYIRSHADSDAPRKWWQPHNISGGGGLHIHH MVIGVILVMVSGISMVALAVDGGIPEFTAASILFGIGAALVLDEFALILHLSDVYWAEDGRTSVDAVFVA VAVAGLLILGFNPLSFFDVGIWQNDHSVAARTIVVVAAVLTLALAVIVLLKGKVWTGLVGMFITPLLFVG AIRLSRPHAPWARWRYTKRPRKMHRALERERWLRRPVVQAKLWLQDAIAGMPKFPDDALVDEQLDREIHA APAPGNPEPVTQKAS*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_3542 | - | - | 100% (296) | hypothetical protein Mvan_3542 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2202c | - | 4e-99 | 62.64% (273) | integral membrane protein |
M. gilvum PYR-GCK | Mflv_2969 | - | 1e-152 | 87.84% (296) | hypothetical protein Mflv_2969 |
M. tuberculosis H37Rv | Rv2180c | - | 5e-99 | 62.64% (273) | integral membrane protein |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_2491c | - | 2e-42 | 42.06% (252) | hypothetical protein MAB_2491c |
M. marinum M | MMAR_3224 | - | 1e-104 | 66.30% (273) | hypothetical protein MMAR_3224 |
M. avium 104 | MAV_2314 | - | 1e-101 | 64.31% (269) | hypothetical protein MAV_2314 |
M. smegmatis MC2 155 | MSMEG_4246 | - | 1e-133 | 83.09% (272) | integral membrane protein |
M. thermoresistible (build 8) | TH_1104 | - | 1e-126 | 75.34% (292) | Probable conserved integral membrane protein |
M. ulcerans Agy99 | MUL_3535 | - | 6e-45 | 74.79% (119) | hypothetical protein MUL_3535 |
CLUSTAL 2.0.9 multiple sequence alignment Mb2202c|M.bovis_AF2122/97 -MEVFHWLQHDI-----VDRGRLPLLCCLVAFVLTFLVTRSFVRFIHRRA Rv2180c|M.tuberculosis_H37Rv -MEVFHWLQHDI-----VDRGRLPLLCCLVAFVLTFLVTRSFVRFIHRRA MMAR_3224|M.marinum_M ---MFYWLQHDI-----VDRGRLPLLCCLVAFILTFFVTRTFVRVIRGRP MAV_2314|M.avium_104 MSEVTRWFAHDV-----YDRGHLPLLCCLVAFILTFFVTRSFVRFIRHRA Mvan_3542|M.vanbaalenii_PYR-1 ---MRPDLDVELGFSTHLPPSRLPLVCCLVAFILTFFITRTIVRYIRSHA Mflv_2969|M.gilvum_PYR-GCK ---MRSDLDLDLGFSVHIPSSRLPLVCCLVAFILTFFITRTIVRYIRSQA MSMEG_4246|M.smegmatis_MC2_155 ---MQATVHLDL-----VPRDRLPLVCCLLAFILTFFVTRTVVRYIRSHA TH_1104|M.thermoresistible__bu ---VFESDRWDF-----ITHDRLPLLFCLIAFILTFLVTRLIVRYIRRHA MUL_3535|M.ulcerans_Agy99 ---------------------MLPGCLHPDVFCDPHLRARHPRAPRRWPV MAB_2491c|M.abscessus_ATCC_199 MSWLSTWWRYDV-----VDGYKGPLLLGFVAFVVTFVVTRTITRLIR--- * .* ... :* : Mb2202c|M.bovis_AF2122/97 ADGRPARWWQPRNVH-------IGSVHIHHVAFGVVLVMISGLTLVTLSV Rv2180c|M.tuberculosis_H37Rv ADGRPARWWQPRNVH-------IGSVHIHHVAFGVVLVMISGLTLVTLSV MMAR_3224|M.marinum_M DGGPPPRWWQPRNVH-------LGSVHVHHVTFGVVLVMISGLTLVTLAV MAV_2314|M.avium_104 ETGRPARWWHPRNVH-------VGGVHIHHVTFGVVLTLLSGLTLVTLSI Mvan_3542|M.vanbaalenii_PYR-1 DSDAPRKWWQPHNIS------GGGGLHIHHMVIGVILVMVSGISMVALAV Mflv_2969|M.gilvum_PYR-GCK GSDAPRKWWQPRNIS------AGGGLHIHHVVIGVVLVMVSGITMVTIAV MSMEG_4246|M.smegmatis_MC2_155 DSDQPRRWWQPRNIA------HG-TMHIHHVVIGVVLVMVSGVTMVTLAV TH_1104|M.thermoresistible__bu DSDAPRKWWQPRNIAVFTEEGGPGGLHIHHVVLGVVLVLVSGVALVTLSV MUL_3535|M.ulcerans_Agy99 AQVVAAPQCGPR----------VGACPPCDIRGGAGDDL--GADLGDAGC MAB_2491c|M.abscessus_ATCC_199 DGKGP-----FHNIS-------GGGVHIHHSTPGVLLLIVGGFTALGSPP . : . *. : * Mb2202c|M.bovis_AF2122/97 DGREPEFTIAASIFGVGAALVLDEYALILHLSDVYWEEDGRTSVDAVFAA Rv2180c|M.tuberculosis_H37Rv DGREPEFTIAASIFGVGAALVLDEYALILHLSDVYWEEDGRTSVDAVFAA MMAR_3224|M.marinum_M NGREPELSVAATFFGIGAALVLDEYALILHLSDVYWEEDGRTSVDAVFAA MAV_2314|M.avium_104 NGHEPEFTVAATFFGIGAALVLDEYALILHLSDVYWSEDGRTSVDAVFAA Mvan_3542|M.vanbaalenii_PYR-1 DGGIPEFTAASILFGIGAALVLDEFALILHLSDVYWAEDGRTSVDAVFVA Mflv_2969|M.gilvum_PYR-GCK DGGVPEFTAASILFGVGAALVLDEFALILHLEDVYWAEDGRTSVDAVFVA MSMEG_4246|M.smegmatis_MC2_155 NGGVAEFTVAATFFGIGAALVLDEFALILHLSDVYWSEDGRTSVDAVFAA TH_1104|M.thermoresistible__bu SGGVPEITVAATFFGIGAALVLDEFALILHLSDVYWTEDGRTSVDAVFVA MUL_3535|M.ulcerans_Agy99 QRTRARTQRGGNFFGIGAALVLDEYALILHLSDVYWEEDGRTSVDAVFAA MAB_2491c|M.abscessus_ATCC_199 LS--VWTYLAGLLVGVGASLVLDEFAMIFHLQDVYWTNEGQLSVDMVTLA .. :.*:**:*****:*:*:**.**** ::*: *** * * Mb2202c|M.bovis_AF2122/97 VAVAGLLIMGLHPLIFFLT-VRQGANWVVLQTTLIAGLVLTLPLAVVVLL Rv2180c|M.tuberculosis_H37Rv VAVAGLLIMGLHPLIFFLP-VRQGANWVVLQTTLIAGLVLTLPLAVVVLL MMAR_3224|M.marinum_M VAVAGLLTLGLHPLMFFPT-IWSGSDSVLPRAVVVGGLVLTLPLATVVLI MAV_2314|M.avium_104 VAVGGLLIMGLHPLMFFLP-MWHGADSMMLRALVGGAMVLTLPLAVVVVL Mvan_3542|M.vanbaalenii_PYR-1 VAVAGLLILGFNPLSFFDVGIWQNDHSVAARTIVVVAAVLTLALAVIVLL Mflv_2969|M.gilvum_PYR-GCK VAVAGLLILGFNPLSFFDVADWQDDPSVTTRAIVVVAALATLALAVIVLL MSMEG_4246|M.smegmatis_MC2_155 VAVAGLLILGFNPLSFFDVDIWREDPSWLARAAVVLLAVVTLLLAVVVLL TH_1104|M.thermoresistible__bu VAVAGLLMLGFNPLSFFDVGMWRDDESVAARLTVIALALVTLMLAVVVLL MUL_3535|M.ulcerans_Agy99 VAVAGLLTLGLHPLMFFPT-IWSGSDSVLPRAVVVGGLVLTLPLATVVLI MAB_2491c|M.abscessus_ATCC_199 TACISLAAVGVSPLNVDGL----TGVIAIARGVAMLLLLVHLALVAVTAL .* .* :*. ** . : : * *..:. : Mb2202c|M.bovis_AF2122/97 KGKVWTGLLGMFVVVLLVVGAVRLSRPHAPWARWRYTRHPEKMRRALQRE Rv2180c|M.tuberculosis_H37Rv KGKVWTGLLGMFVVVLLVVGAVRLSRPHAPWARWRYTRHPEKMRRALQRE MMAR_3224|M.marinum_M KGKVWTGLLGMFIVVLLVIGAIRLSRPHAPWARWRYTAKPDKMRRALQRE MAV_2314|M.avium_104 KGKVWTGLLGMFLVVLLVIGAVRLSRPHAPWARWRYSTQPEKMRRALQRE Mvan_3542|M.vanbaalenii_PYR-1 KGKVWTGLVGMFITPLLFVGAIRLSRPHAPWARWRYTKRPRKMHRALERE Mflv_2969|M.gilvum_PYR-GCK KGKVWTGLVGMFITPLLVIGAVRLSRPHAPWARWRYTSRPRKMHRALERE MSMEG_4246|M.smegmatis_MC2_155 KGKVWTGLVGMFITPLLVIGAIRLSRPHAPWARWRYTKRPRKMHRALERE TH_1104|M.thermoresistible__bu KGKVWTGLVGMFITPLLVIGAIRLSRPHAPWARWRYTGRPRKMHRALLRE MUL_3535|M.ulcerans_Agy99 KGKVWTGLLGMFIVVLLVIGAIRLSRPHAPWAPVALYRETGQDAASVAAR MAB_2491c|M.abscessus_ATCC_199 KGKYPTAMLGIFLAPIAWVAAFRLARPTSPWARWRYS--PRRLTRARQRA *** *.::*:*:. : :.*.**:** :*** . : : Mb2202c|M.bovis_AF2122/97 RTWRRPVVRIKLWLQYVIAGTPRMPDERAVDAQLDQDVRPAPPPER---- Rv2180c|M.tuberculosis_H37Rv RTWRRPVVRIKLWLQYVIAGTPRMPDERAVDAQLDQDVRPAPPPER---- MMAR_3224|M.marinum_M RTLRRPVVRAKLWLQCAIAGTPRLPDERAVEAQLDRDVHPAPPPEG---- MAV_2314|M.avium_104 RTLRRPVVRAKLYLQCAIAGTPRFPDERTVDATLDHEVHPAPAP------ Mvan_3542|M.vanbaalenii_PYR-1 RWLRRPVVQAKLWLQDAIAGMPKFPDDALVDEQLDREIHAAPAPGN---- Mflv_2969|M.gilvum_PYR-GCK RWLRRPVVQAKLWLQDAIAGMPKFPDDALVDEQLDREIHAAPAPAE---- MSMEG_4246|M.smegmatis_MC2_155 RWLRRPVVQAKLWLQDAITGMPRFPDDAAVDEQLDREIHAAPAPGAGIDA TH_1104|M.thermoresistible__bu RRVRRPVVQAKIWFQDAIAGMPRFPDDAKVDEQLDREIRAAPAPPD---- MUL_3535|M.ulcerans_Agy99 AHLAPPGGAGQALVAVCDRRHPSAARRARRRGAVGSRRSPRAATRG---- MAB_2491c|M.abscessus_ATCC_199 LGFDHRWGPVRRHWLDAIGGTPTP---ELPQPPTDSRTR----------- : * . Mb2202c|M.bovis_AF2122/97 ---------TAPILISGSVWSD------------- Rv2180c|M.tuberculosis_H37Rv ---------TAPILISGSVWSD------------- MMAR_3224|M.marinum_M ---------TEPILTS--V---------------- MAV_2314|M.avium_104 ---------TGPILIGR------------------ Mvan_3542|M.vanbaalenii_PYR-1 ---------PEPVTQKAS----------------- Mflv_2969|M.gilvum_PYR-GCK ---------REPAPQKAS----------------- MSMEG_4246|M.smegmatis_MC2_155 KIEARIEARTERTRRTGSCGTSTTPSSSTTDARST TH_1104|M.thermoresistible__bu ---------RAGATSMRS----------------- MUL_3535|M.ulcerans_Agy99 --------HRADIDLRIGCGDAVLL---------- MAB_2491c|M.abscessus_ATCC_199 -----------------------------------