For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SVLDMVLIAFAGVGAGAINALVGSGTLITFPTLVTLGFPPVTATMSNAVGLVAGGVSGTWGYRRELRGQW DRLRWQIPASFLGAGCGAWLLLHLPEKVFTRVVPVLLVLALALVVVGPKIQTWAKRRAEAAGRSADHVST ARMTALVAATFAVGVYGGYFTAAQGILLIAAMGALLPEDMQRMNAAKNLLSLIVNIVAAVAYTVVAFDRI SWAAAGLIAIGSLIGGFLGAHYGRRLSPNVLRGVIVVVGLIGLYRLLTV*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_3272 | - | - | 100% (260) | hypothetical protein Mvan_3272 |
| M. vanbaalenii PYR-1 | Mvan_2029 | - | 2e-33 | 37.70% (244) | hypothetical protein Mvan_2029 |
| M. vanbaalenii PYR-1 | Mvan_4025 | - | 3e-08 | 23.27% (245) | hypothetical protein Mvan_4025 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_3492 | - | 1e-129 | 88.85% (260) | hypothetical protein Mflv_3492 |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | MLBr_00468 | - | 1e-100 | 68.99% (258) | hypothetical protein MLBr_00468 |
| M. abscessus ATCC 19977 | MAB_3982 | - | 1e-104 | 71.48% (256) | hypothetical protein MAB_3982 |
| M. marinum M | MMAR_4417 | - | 8e-05 | 32.67% (101) | hypothetical protein MMAR_4417 |
| M. avium 104 | MAV_3519 | - | 1e-111 | 78.04% (255) | hypothetical protein MAV_3519 |
| M. smegmatis MC2 155 | MSMEG_3737 | - | 1e-121 | 80.77% (260) | integral membrane protein |
| M. thermoresistible (build 8) | TH_0204 | - | 1e-117 | 79.62% (260) | integral membrane protein |
| M. ulcerans Agy99 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment
MLBr_00468|M.leprae_Br4923 -MLVSHLATIGLAGFGAGAINALVGSGTLITFPTLVA--LGYSPVTSTMS
MAV_3519|M.avium_104 ------MFVICLAGLAAGAINALVGSGTLITFPTLVA--LGYPPVTATMS
Mvan_3272|M.vanbaalenii_PYR-1 -MSVLDMVLIAFAGVGAGAINALVGSGTLITFPTLVT--LGFPPVTATMS
Mflv_3492|M.gilvum_PYR-GCK -MSVLEMVLIALAGVGAGAINAIVGSGTLITFPTLVT--LGFPPVTATMS
TH_0204|M.thermoresistible__bu -VSVVDMVLIALAGIGAGAINALVGSGTLITFPTLVT--LGVPPVTATMS
MSMEG_3737|M.smegmatis_MC2_155 -MSVTHMILIALAGVGAGAINAVVGSGTLITFPTLVA--LGYPPVTSTMS
MAB_3982|M.abscessus_ATCC_1997 -MPVQEMVLIALAAFGAGAINVVAGSGTLITFPTLIA--FGYPPVVATMS
MMAR_4417|M.marinum_M MLFGFSPWLVYWVLVGNVPFETAVAVALLIALAVLAVGRSAQKPGRTVEI
: . .. .::. .. . **::..* . . * :.
MLBr_00468|M.leprae_Br4923 NAVGLVAGGVSATWGYRAELGDRWSRLRWQIPMSLTGAALGAFLLLHLPE
MAV_3519|M.avium_104 NATGLVAGSVSGTWGYRAELRGQWDRLRWQLPASLAGAGLGAYLLLHLPE
Mvan_3272|M.vanbaalenii_PYR-1 NAVGLVAGGVSGTWGYRRELRGQWDRLRWQIPASFLGAGCGAWLLLHLPE
Mflv_3492|M.gilvum_PYR-GCK NAVGLVAGGVSGTWGYRRELRGQWDRLRWQLPASFIGAAGGAWLLLHLPE
TH_0204|M.thermoresistible__bu NAVGLVAGGVSGAWGYRRELRGQWHRLRWQIPMSLIGAGLGAFLLLRLPE
MSMEG_3737|M.smegmatis_MC2_155 NAVGLVAGGVSGTWGYRRELRGQWKRLRWQIPASLIGAIIGAWLLLHLPE
MAB_3982|M.abscessus_ATCC_1997 NAVGLTVGSMTGVWGYRRELSGQWSRLKWQIPAVLLGALIGSFLLLHLPE
MMAR_4417|M.marinum_M GSVATFSVLTVLTFALSEAFLARWIVAVSNFGIFLV-AVLGVLMGKPLVR
.:.. .:. : :* :: : * * : * .
MLBr_00468|M.leprae_Br4923 KVFTAIVPMLLVLALVLVVAGPRIQSWTRCRAKAAVNRAEHTT-PAQMAM
MAV_3519|M.avium_104 KVFAEIVPVLLVAALVLVVTGPRIQAWTARRAELAGRSPEHVP-PGRMAT
Mvan_3272|M.vanbaalenii_PYR-1 KVFTRVVPVLLVLALALVVVGPKIQTWAKRRAEAAGRSADHVS-TARMTA
Mflv_3492|M.gilvum_PYR-GCK RVFIQVVPGLLVLALVLVVLGPRIQNWAKTRAEADGRSADHVS-AARMTA
TH_0204|M.thermoresistible__bu RVFVQVVPVLLVAALILVVCGPRIQAWARRRAEAAGRAADHVS-VVQLVA
MSMEG_3737|M.smegmatis_MC2_155 KVFVTVVPILLILALVLVLVGPRIQAWARKRAEASGNGADHVS-TRRMVA
MAB_3982|M.abscessus_ATCC_1997 KTFVTVVPVLLILALVLVVVGPKIQAWARRRSEAQGRDADHVP-PGRMAA
MMAR_4417|M.marinum_M EYAAAELPSDVVNTELFKRMT-MILTWIWVAAFAGMTLSSLVPPIVESDA
. :* :: : : * * : .. .. .
MLBr_00468|M.leprae_Br4923 LALGTFAVSVYGGYFTAGQGILLVSLMSILLPESMQRINAAKNLLSMLVN
MAV_3519|M.avium_104 LVFGTFAVGVYGGYFTAAQGILLVGLMGALLPESVQRMNAAKNLLALVVN
Mvan_3272|M.vanbaalenii_PYR-1 LVAATFAVGVYGGYFTAAQGILLIAAMGALLPEDMQRMNAAKNLLSLIVN
Mflv_3492|M.gilvum_PYR-GCK LVAGTFLVGVYGGYFTAAQGILLIAVMGALLPEDMQRMNAAKNLLSLVVN
TH_0204|M.thermoresistible__bu LVFGTFAIAVYGGYFTAAQGILFMALMGALLPEDIQRMNAVKNLLSLFIN
MSMEG_3737|M.smegmatis_MC2_155 VVLGTWAVGIYGGYFTAAQGILLVAVMGALLPESIQRMNAAKNLLSLLVN
MAB_3982|M.abscessus_ATCC_1997 LTGGNFLVGIYGGYFTAAQGIMQIAVMGALLPESMQRMNAAKNVLAMITN
MMAR_4417|M.marinum_M TILDTKTPVSFMCYWVIPVSLLGLAALASQLLP--TRMLAGIDDVVRETS
. : *:. .:: :. :. * *: * : : .
MLBr_00468|M.leprae_Br4923 LTAAVGYTLVAFDRINWSAAG-MIAASSLVGGLVGTRYARRLSPNVLRAT
MAV_3519|M.avium_104 VVAAVAYTSVAFGRISWAAAG-LIAAGSLVGGLLGARYGRRLSGGALRAI
Mvan_3272|M.vanbaalenii_PYR-1 IVAAVAYTVVAFDRISWAAAG-LIAIGSLIGGFLGAHYGRRLSPNVLRGV
Mflv_3492|M.gilvum_PYR-GCK IVAAVGYTVVAFDRISWAAAG-LIAVGSLIGGFLGAHYGRRLSPTALRAV
TH_0204|M.thermoresistible__bu MVAAAGFMLVAFDRISWTAAA-LIAVGSLIGGYLGAHYGRRLSPNALRAA
MSMEG_3737|M.smegmatis_MC2_155 IVAALAYTLVAFDRISWEAAG-LIAVGSLLGGFLGSHFGRRLSPNALRAV
MAB_3982|M.abscessus_ATCC_1997 IVAALAYTIVAFDRVSWTAAG-IIAAGSFVGGLAGARWGRRLSPGALRAV
MMAR_4417|M.marinum_M FVAYDEATIDELYYLAQEHANREVGPGKEAYNVKVGGMGTPLTGDEARKS
..* : : * :. .. . . *: *
MLBr_00468|M.leprae_Br4923 IVAIGLIGLVRLLAV-
MAV_3519|M.avium_104 IVVVGLIGLYRLLAVA
Mvan_3272|M.vanbaalenii_PYR-1 IVVVGLIGLYRLLTV-
Mflv_3492|M.gilvum_PYR-GCK IVVVGLIGLWRLLTV-
TH_0204|M.thermoresistible__bu IVVVGLIGLYRLLTL-
MSMEG_3737|M.smegmatis_MC2_155 IIIVGLIGLYRLLTV-
MAB_3982|M.abscessus_ATCC_1997 IVAVGLIGLWRLLF--
MMAR_4417|M.marinum_M WPSTYKVRDKRR----
: *