For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
LFGFSPWLVYWVLVGNVPFETAVAVALLIALAVLAVGRSAQKPGRTVEIGSVATFSVLTVLTFALSEAFL ARWIVAVSNFGIFLVAVLGVLMGKPLVREYAAAELPSDVVNTELFKRMTMILTWIWVAAFAGMTLSSLVP PIVESDATILDTKTPVSFMCYWVIPVSLLGLAALASQLLPTRMLAGIDDVVRETSFVAYDEATIDELYYL AQEHANREVGPGKEAYNVKVGGMGTPLTGDEARKSWPSTYKVRDKRR*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. marinum M | MMAR_4417 | - | - | 100% (258) | hypothetical protein MMAR_4417 |
| M. marinum M | MMAR_3455 | - | 3e-11 | 25.13% (191) | hypothetical protein MMAR_3455 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_3941 | - | 1e-93 | 60.47% (258) | hypothetical protein Mflv_3941 |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | MLBr_00265 | - | 5e-15 | 53.62% (69) | hypothetical protein MLBr_00265 |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. avium 104 | MAV_1182 | - | 1e-97 | 66.16% (263) | hypothetical protein MAV_1182 |
| M. smegmatis MC2 155 | MSMEG_3475 | - | 1e-104 | 67.44% (258) | hypothetical protein MSMEG_3475 |
| M. thermoresistible (build 8) | TH_0418 | - | 4e-96 | 63.57% (258) | conserved hypothetical protein |
| M. ulcerans Agy99 | MUL_2729 | - | 9e-08 | 23.70% (173) | hypothetical protein MUL_2729 |
| M. vanbaalenii PYR-1 | Mvan_2458 | - | 6e-96 | 60.47% (258) | hypothetical protein Mvan_2458 |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_3941|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_2458|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_3475|M.smegmatis_MC2_155 --------------------------------------------------
TH_0418|M.thermoresistible__bu -----------------------------------------------LPT
MMAR_4417|M.marinum_M --------------------------------------------------
MAV_1182|M.avium_104 --------------------------------------------------
MLBr_00265|M.leprae_Br4923 --------------------------------------------------
MUL_2729|M.ulcerans_Agy99 MTCHQCHSNIDMSLLTCRYWNVGNVRSTGDSKCPPECACLLQRRQRQAAG
Mflv_3941|M.gilvum_PYR-GCK MGIIFGLAP-----WLVYWVLVGNVPFHTA-------------VLVALAV
Mvan_2458|M.vanbaalenii_PYR-1 MGIIFGFAP-----WIVYWVLVGNVPFHAA-------------VLIALAV
MSMEG_3475|M.smegmatis_MC2_155 MGILFGFAP-----WIIYWVLVGNVPFLTA-------------VLIALAT
TH_0418|M.thermoresistible__bu VSILFGFAP-----WIVFWVLVGNVPFTAA-------------VLVALAI
MMAR_4417|M.marinum_M --MLFGFSP-----WLVYWVLVGNVPFETA-------------VAVALLI
MAV_1182|M.avium_104 MGMLFGLAP-----WIVYWVLVGNVPFVAA-------------VLVALAL
MLBr_00265|M.leprae_Br4923 --------------------------------------------------
MUL_2729|M.ulcerans_Agy99 SATGQGLQPRTRPRWVPSLAACGNRPMGTASNPVRTRGRFELTAAGALGL
Mflv_3941|M.gilvum_PYR-GCK AVASFVVARVSGSPGRVLEIGAVATFAVLTVLTFTVSG---SFLEQWLQP
Mvan_2458|M.vanbaalenii_PYR-1 AVAAFVAARVARSPGRTLEIGAVATFLVLAALTFTMSS---AFMERWLQP
MSMEG_3475|M.smegmatis_MC2_155 AVATFVISRISGTPGRTLEIGALATFLVLTVLTFVLSQ---DAMERWMQP
TH_0418|M.thermoresistible__bu AVATLVIGHRTGAPGRALQIGAVSTFVVLTVVTVVLHQ---TFLERWLQP
MMAR_4417|M.marinum_M ALAVLAVGRSAQKPGRTVEIGSVATFSVLTVLTFALSE---AFLARWIVA
MAV_1182|M.avium_104 AAVSLGLGGVLRRRWQLFDFASVAVLLVLAVLAFTLSE---SILQRWILP
MLBr_00265|M.leprae_Br4923 --------------------------MVLTVLVFALTE---SFTTSWIKQ
MUL_2729|M.ulcerans_Agy99 SALVMLAGLSRGVRVHALEVFGTAFFGAMLVVGLFATDNAIQWLELWSGE
.: .: . *
Mflv_3941|M.gilvum_PYR-GCK LSNAGILVAALVGVLAGRPFVREFAVVGQPKEVVESEPFARITSVLTWIW
Mvan_2458|M.vanbaalenii_PYR-1 LSNAGIFLVALVGALVGRPFVREFAVVGQPKEVIESEPFARITSTLTWIW
MSMEG_3475|M.smegmatis_MC2_155 LSNAGIFLVALVGAIIGKPFVKEYAEVGQPPGVVESDLFKRIVAILTWVW
TH_0418|M.thermoresistible__bu LGNAGILLAALTGVLVDKPFVREYAAVGQPPEVLESDVFNKITTVLTWVW
MMAR_4417|M.marinum_M VSNFGIFLVAVLGVLMGKPLVREYAAAELPSDVVNTELFKRMTMILTWIW
MAV_1182|M.avium_104 LSNAGIFLAALAGMLIGKPFVAEFAAAEQAPDVAKTELFGRIVKILGWIW
MLBr_00265|M.leprae_Br4923 FSIAGILWVVLIGQLTGELFVRDFAAAERPDDVVKTQLFARIVTLLTWI-
MUL_2729|M.ulcerans_Agy99 LTNAALACFAWLTLLIRRPFTMAYAKDTTPPEHWDSPLFKKINTVITIVW
. .: . : . :. :* . .: * :: : :
Mflv_3941|M.gilvum_PYR-GCK IAAFAGMTVSSAIPPMVQG-----DATILDTQTPLSFIFYWVVPFALLGV
Mvan_2458|M.vanbaalenii_PYR-1 IAAFGGMTVSSAIPPLVQG-----DATILDTRTPLSFLCYWVVPFSLLGV
MSMEG_3475|M.smegmatis_MC2_155 VGAFAGMTVSSAIPPIVQG-----DATILDTKTPLSFVCYWVIPFALLGV
TH_0418|M.thermoresistible__bu IGAFAGMTVSSAIPPIVQG-----DATLLDVNTPLSFVFYWVIPFSLLGL
MMAR_4417|M.marinum_M VAAFAGMTLSSLVPPIVES-----DATILDTKTPVSFMCYWVIPVSLLGL
MAV_1182|M.avium_104 VATFAGMTVSSAIPSVLQGSAGAAPAYMLDTKTPLSFLCYWIIPFALLGL
MLBr_00265|M.leprae_Br4923 --------------------------------------------------
MUL_2729|M.ulcerans_Agy99 AGAFTFAGTVGFIGDYLWH-------------DGTNFSTGWILQLAAIFF
Mflv_3941|M.gilvum_PYR-GCK AALLTRILPDRMVPPAEEIVRKTTFVAFAEAEIDQLIYLATEHANREAGA
Mvan_2458|M.vanbaalenii_PYR-1 AALLTRILPDRMLPPEEEIVRKTTFVAFAEAEIDQLIYLATEHANREVGA
MSMEG_3475|M.smegmatis_MC2_155 AALVSRVLPDRMMEGINDVVRKTTFVAYSEAAIDELYYLAQEHANREVGP
TH_0418|M.thermoresistible__bu AALASRLLPDRLAEEIGNAPRTTSFVAYSEATIDELYYLAQEHANREVGA
MMAR_4417|M.marinum_M AALASQLLPTRMLAGIDDVVRETSFVAYDEATIDELYYLAQEHANREVGP
MAV_1182|M.avium_104 AAVVSRLLPDRMLIGIDDLERETSFVAYDEATIDELYFLAQEHANREVGP
MLBr_00265|M.leprae_Br4923 --------------------------------------------------
MUL_2729|M.ulcerans_Agy99 AAAITDFYPDYAAAKFDLANGEPALVLSVLQTVGWLPSFLTVTG----IA
Mflv_3941|M.gilvum_PYR-GCK GKEAYDVRIGSKGVPLVGDETRESWPSTYKVRDRKR
Mvan_2458|M.vanbaalenii_PYR-1 GKEAYDVRIGSKGVPLVGDDTRESWPSTYKVRERKR
MSMEG_3475|M.smegmatis_MC2_155 GQEAYDVRVGGSGTPLVGDESRMSWPSTYKVRDRRR
TH_0418|M.thermoresistible__bu GKEAYDVRVGGKGTPLVGDESRMSWQSTYKVRDRRR
MMAR_4417|M.marinum_M GKEAYNVKVGGMGTPLTGDEARKSWPSTYKVRDKRR
MAV_1182|M.avium_104 GKEAYAVKVGGMGTPLTGDESRKSWPSTYKVRDKRR
MLBr_00265|M.leprae_Br4923 ------------------------------------
MUL_2729|M.ulcerans_Agy99 GLLTNSVDSLAAIALIVAGNVASSILAKVLPKQTKS