For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTIVGAAEFVPQTRELSTLAAAAQSCRGCDLFENASRAVFGSGPVGARMMLVGEQPGDREDVAGEPFVGP AGRLLDKALDEAGLPRAPVYLTNAVKHFKFVPAERGTRRIHKTPSRTEVVACRPWLIAEMQAVEPAVVVL LGATAAKSLLGNAFRLTAHRGEVLSLPAETKPVGGRDAKVVVTVHPSSVLRGPSQAREESFRSLVSDLRF AGELLDA
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_3202 | - | - | 100% (217) | phage SPO1 DNA polymerase-related protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | - | - | - | - | - |
M. avium 104 | MAV_4094 | - | 2e-62 | 56.81% (213) | uracil DNA glycosylase superfamily protein |
M. smegmatis MC2 155 | MSMEG_0265 | - | 3e-72 | 64.15% (212) | uracil DNA glycosylase superfamily protein |
M. thermoresistible (build 8) | TH_1350 | - | 1e-74 | 66.20% (216) | uracil DNA glycosylase superfamily protein |
M. ulcerans Agy99 | MUL_0027 | - | 2e-08 | 27.66% (141) | glycosylase |
CLUSTAL 2.0.9 multiple sequence alignment Mvan_3202|M.vanbaalenii_PYR-1 ----MTIVGAAEFVPQTRELSTLAAAAQSCRGCD--LFENASRAVFGSGP TH_1350|M.thermoresistible__bu ----MAVTGAARFVPATRDLGELAEAVHACKGCD--LYVDATQAVFGAGP MSMEG_0265|M.smegmatis_MC2_155 ------MAGAQDFVPHTADLAELAAAAGECRGCG--LYRDATQAVFGAGG MAV_4094|M.avium_104 MTATSKAPGADRYLPEQRDIEALKHAAETCRGCS--LFADATQTVFGNGH MUL_0027|M.ulcerans_Agy99 -MGPSVTEDYDSSASRRLRKIALDAEIAGCRRCEGMNIAPATMSAPGYGC . . * *: * *: :. * * Mvan_3202|M.vanbaalenii_PYR-1 VGARMMLVGEQPGDREDVAGEPFVGPAGRLLDKALDEAGLPRAPVYLTNA TH_1350|M.thermoresistible__bu GTAPMVMVGEQPGDREDTAGQPFVGPAGRLLQRALDAAGIDRAEVYVTNA MSMEG_0265|M.smegmatis_MC2_155 RSARIMMIGEQPGDKEDLAGLPFVGPAGRLLDRALEAADIDRDALYVTNA MAV_4094|M.avium_104 PGAPIMLVGEQPGDQEDRAGAPFVGPAGRLLARALHDAGIDPGLTYQTNA MUL_0027|M.ulcerans_Agy99 VSSPVALIGQSLCEKCMESQVPFTGGSGELIDESIQRAGREKEDVFISDA : : ::*:. :: : **.* :*.*: .::. *. : ::* Mvan_3202|M.vanbaalenii_PYR-1 VKHFKFVPAERGTRRIHKTPSRTEVVACRPWLIAEMQAVEPAVVVLLGAT TH_1350|M.thermoresistible__bu VKHFTFT---RGRRLIHKTPSRSDVVACRPWLIAELDSVRPEVVVLLGAT MSMEG_0265|M.smegmatis_MC2_155 VKHFKFTRAAGGKRRIHKTPSRTEVVACRPWLIAEMTSVEPDVVVLLGAT MAV_4094|M.avium_104 VKHFKFTR-KDGKRRIHQKPGRTEIVACRPWLIAEIEAVHPRVIVCLGAT MUL_0027|M.ulcerans_Agy99 VHCHPPK---------NRSSHQHEIVDCSPYLHRELEIVRPRLVVALGRD *: . ::.. : ::* * *:* *: *.* ::* ** Mvan_3202|M.vanbaalenii_PYR-1 AAKSLLGNAFRLTAHRGEVLSLPAETKPV-G-GRDAKVVVTVHPSSVLRG TH_1350|M.thermoresistible__bu AAKSLLGPDFRLTAHRGEVLRLPAGDATV-GLGVDPLVVVTVHPSAVLRG MSMEG_0265|M.smegmatis_MC2_155 AAKALLGNDFRVTQHRGEVLHVDDVPG-------DPALVATVHPSSLLRG MAV_4094|M.avium_104 AAQSLLGTSFRVSAQRGQPLKLPASPEVIPDVAPEPVLVATVHPSSVLRD MUL_0027|M.ulcerans_Agy99 GER-VLTFFYPSARICEELFEIPRGRLPK----GVPYIFHVKHPSWIQRQ . : :* : : : : : . :. . *** : * Mvan_3202|M.vanbaalenii_PYR-1 PSQAREESFRSLVSDLRFAGELLDA------------------------- TH_1350|M.thermoresistible__bu RPGDRAEAFDALVADLEVAAGLMGS------------------------- MSMEG_0265|M.smegmatis_MC2_155 PKEERESAFAGLVDDLRVAADVRP-------------------------- MAV_4094|M.avium_104 RSERHDEVYRLFVDDLRSARSALG-------------------------- MUL_0027|M.ulcerans_Agy99 HDDNLEANYGRTCPRRSGGASTAKARKRRARRDVASADVQFLDGYPVLSH : . Mvan_3202|M.vanbaalenii_PYR-1 ---------------- TH_1350|M.thermoresistible__bu ---------------- MSMEG_0265|M.smegmatis_MC2_155 ---------------- MAV_4094|M.avium_104 ---------------- MUL_0027|M.ulcerans_Agy99 AVPCRPAWCIPRVPES