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M. vanbaalenii PYR-1 Mvan_2575 (ruvB)

annotation: Holliday junction DNA helicase B
coordinates: 2714375 - 2715442
length: 355

MGRFSEDSADEPDEREMSAALTVGEGDIDASLRPRSLGEFIGQPRVREQLQLVLEGAKNRGGTPDHILLS
GPPGLGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARPAEEMLYLAME
DFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFYEPSELERVLARSAGILG
IELGAEAGAEIARRSRGTPRIANRLLRRVRDYAEVRADGVITRDIAKYALEVYDVDELGLDRLDRAVLSA
LTRSFGGGPVGVSTLAVAVGEEATTVEEVCEPFLVRAGMIARTPRGRVATAQAWTHLGMKPPANAVGLGQ
TGLFD
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. vanbaalenii PYR-1Mvan_2575ruvB-100% (355)Holliday junction DNA helicase B
M. vanbaalenii PYR-1Mvan_2635-2e-1225.85% (352) recombination factor protein RarA
M. vanbaalenii PYR-1Mvan_4036clpX7e-0526.25% (160) ATP-dependent protease ATP-binding subunit

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb2623cruvB1e-17892.75% (345) Holliday junction DNA helicase RuvB
M. gilvum PYR-GCKMflv_3824ruvB0.094.40% (357) Holliday junction DNA helicase B
M. tuberculosis H37RvRv2592cruvB1e-17892.75% (345) Holliday junction DNA helicase RuvB
M. leprae Br4923MLBr_00483ruvB1e-17689.74% (351) Holliday junction DNA helicase RuvB
M. abscessus ATCC 19977MAB_2882cruvB1e-17388.86% (350) Holliday junction DNA helicase RuvB
M. marinum MMMAR_2111ruvB1e-17791.01% (345) Holliday junction DNA helicase RuvB
M. avium 104MAV_3473ruvB1e-17892.69% (342) Holliday junction DNA helicase B
M. smegmatis MC2 155MSMEG_2945ruvB0.092.68% (355) Holliday junction DNA helicase B
M. thermoresistible (build 8)TH_1490ruvB0.091.29% (356) PROBABLE HOLLIDAY JUNCTION DNA HELICASE RUVB
M. ulcerans Agy99MUL_1716ruvB1e-17690.72% (345) Holliday junction DNA helicase RuvB

CLUSTAL 2.0.9 multiple sequence alignment


Mvan_2575|M.vanbaalenii_PYR-1       ---MGRFS--EDSADEPDEREMSAALTVGEGDIDASLRPRSLGEFIGQPR
MSMEG_2945|M.smegmatis_MC2_155      ---MGRFE--DDAEVE--DREVSPALTVGEGDIDASLRPRSLGEFIGQPR
Mflv_3824|M.gilvum_PYR-GCK          ---MGRFSNADGPGDDADEREVTPALTVGEGDIDASLRPRSLGEFIGQPR
MMAR_2111|M.marinum_M               ------------MSTDPDEREVSPALTVGDGDVDVSLRPRSLREFIGQPR
MUL_1716|M.ulcerans_Agy99           ------------MSTDPDEREVSPALTVGDGDVDVSLRPRSLREFIGQPR
MLBr_00483|M.leprae_Br4923          ------------MSEDYLDRDVSPALTVGEADIDVSLRPRSLREFIGQPR
Mb2623c|M.bovis_AF2122/97           ------------MTERS-DRDVSPALTVGEGDIDVSLRPRSLREFIGQPR
Rv2592c|M.tuberculosis_H37Rv        ------------MTERS-DRDVSPALTVGEGDIDVSLRPRSLREFIGQPR
MAV_3473|M.avium_104                ---------MTAHDADWSDRDVSGALVPGEGDIDVSLRPRSLREFIGQPR
TH_1490|M.thermoresistible__bu      ---MSRFD-AHAAEQGEPEREVSPALTVGEGDIDAGLRPRSLDEFIGQPR
MAB_2882c|M.abscessus_ATCC_199      MSRVNEFDDLDDGEDGFDNAHMSGALTVGENDVDAGLRPKSLREFIGQPR
                                                      : .:: **. *: *:*..***:** *******

Mvan_2575|M.vanbaalenii_PYR-1       VREQLQLVLEGAKNRGGTPDHILLSGPPGLGKTSLAMIIAAELGSSLRVT
MSMEG_2945|M.smegmatis_MC2_155      VREQLQLVLEGAKKRGGTPDHILLSGPPGLGKTSLAMIIAAELGSSLRVT
Mflv_3824|M.gilvum_PYR-GCK          VREQLQLVLEGAKNRGGTPDHILLSGPPGLGKTSLAMIIAAELGSSLRVT
MMAR_2111|M.marinum_M               VREQLQLVIQGAKNRGGTPDHILLSGPPGLGKTSLAMIIAAELGSSLRMT
MUL_1716|M.ulcerans_Agy99           VREQLQLVIQGAKNRGGTPDHILLSGPPGLGKTSLAVIIAAELGSSLRMT
MLBr_00483|M.leprae_Br4923          VREQLQLVIEGAKNRGATPDHILLSGPPGLGKTSLAMIIAAELGSSLRMT
Mb2623c|M.bovis_AF2122/97           VREQLQLVIEGAKNRGGTPDHILLSGPPGLGKTSLAMIIAAELGSSLRVT
Rv2592c|M.tuberculosis_H37Rv        VREQLQLVIEGAKNRGGTPDHILLSGPPGLGKTSLAMIIAAELGSSLRVT
MAV_3473|M.avium_104                VREQLQLVIEGAKNRGGTPDHILLSGPPGLGKTSLAMIIAAELGSSLRVT
TH_1490|M.thermoresistible__bu      VREQLQLVIEGAKNRGGTPDHILLSGPPGLGKTSLAMIIAAELGSSLRVT
MAB_2882c|M.abscessus_ATCC_199      VREQLELVLSGAKNRGGTPDHILLSGPPGLGKTSLAMIIAAELGSSLRVT
                                    *****:**:.***:**.*******************:***********:*

Mvan_2575|M.vanbaalenii_PYR-1       SGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARPAEEMLYLAMEDFRVD
MSMEG_2945|M.smegmatis_MC2_155      SGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARPAEEMLYLAMEDFRVD
Mflv_3824|M.gilvum_PYR-GCK          SGPALERAGDLAAMLSNLIEGDVLFIDEIHRIARPAEEMLYLAMEDFRVD
MMAR_2111|M.marinum_M               SGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARPAEEMLYLAMEDFRVD
MUL_1716|M.ulcerans_Agy99           SGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARPAEEMLYLAMEDFRVD
MLBr_00483|M.leprae_Br4923          SGPALERAGDLAVMLSNLVEHDVLFIDEIHRIARPAEEMLYLAMEDFRVD
Mb2623c|M.bovis_AF2122/97           SGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARPAEEMLYLAMEDFRVD
Rv2592c|M.tuberculosis_H37Rv        SGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARPAEEMLYLAMEDFRVD
MAV_3473|M.avium_104                SGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARPAEEMLYLAMEDFRVD
TH_1490|M.thermoresistible__bu      SGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARPAEEMLYLAMEDFRVD
MAB_2882c|M.abscessus_ATCC_199      SGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARPAEEMLYLAMEDFRVD
                                    ************.*****:* *****************************

Mvan_2575|M.vanbaalenii_PYR-1       VVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFYEP
MSMEG_2945|M.smegmatis_MC2_155      VVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFYEP
Mflv_3824|M.gilvum_PYR-GCK          VVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFYEP
MMAR_2111|M.marinum_M               VVVGKGPGATSIPLDVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFYEP
MUL_1716|M.ulcerans_Agy99           VVVGKGPGATSIPLDVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFYEP
MLBr_00483|M.leprae_Br4923          VIVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFYEP
Mb2623c|M.bovis_AF2122/97           VVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFYEP
Rv2592c|M.tuberculosis_H37Rv        VVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFYEP
MAV_3473|M.avium_104                VVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFYEP
TH_1490|M.thermoresistible__bu      VVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFYEP
MAB_2882c|M.abscessus_ATCC_199      IVVGKGPGATSIPLEVAPFTLVGATTRSGSLTGPLRDRFGFTAHMDFYEP
                                    ::************:**************:********************

Mvan_2575|M.vanbaalenii_PYR-1       SELERVLARSAGILGIELGAEAGAEIARRSRGTPRIANRLLRRVRDYAEV
MSMEG_2945|M.smegmatis_MC2_155      VELERVLARSAGILGIELGAEAGAEIARRSRGTPRIANRLLRRVRDFAEV
Mflv_3824|M.gilvum_PYR-GCK          AELERVLARSAGILGIELGAEAGAEIARRSRGTPRIANRLLRRVRDYAEV
MMAR_2111|M.marinum_M               AELERVLVRSAGILGIQLGADAGAEIARRSRGTPRIANRLLRRVRDFAEV
MUL_1716|M.ulcerans_Agy99           AELERVLVRSAGILGIQLGADAGAEIARRSRGTPRIANRLLRRVRDFAEV
MLBr_00483|M.leprae_Br4923          TELEGVLARAAGILGIELGVEAGAEIARRSRGTPRIANRLLRRVRDFAEV
Mb2623c|M.bovis_AF2122/97           AELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEV
Rv2592c|M.tuberculosis_H37Rv        AELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEV
MAV_3473|M.avium_104                AELQQVLARSAGILGIELGAEAAEEIARRSRGTPRIANRLLRRVRDFAEV
TH_1490|M.thermoresistible__bu      AELEQVLARSAGILGIELGAEAAAEIARRSRGTPRIANRLLRRVRDYAEV
MAB_2882c|M.abscessus_ATCC_199      DELELVLARSAGILGIELGADAGTEIARRSRGTPRIANRLLRRVRDYAEV
                                     **: **.*:******:**.:*. **********************:***

Mvan_2575|M.vanbaalenii_PYR-1       RADGVITRDIAKYALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTL
MSMEG_2945|M.smegmatis_MC2_155      RADGIITRDIAKSALEVYDVDELGLDRLDRAVLSALTRSFNGGPVGVSTL
Mflv_3824|M.gilvum_PYR-GCK          RADGVITRDIAKYALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTL
MMAR_2111|M.marinum_M               RADGVITRDVAKAALAVYDVDELGLDRLDRAVLSALTRSFSGGPVGVSTL
MUL_1716|M.ulcerans_Agy99           RADGVITRDVAKAALAVYDVDELGLDRLDRAVLSALTRSFSGGPVGVSTL
MLBr_00483|M.leprae_Br4923          RADGVITRDVAKAALAVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTL
Mb2623c|M.bovis_AF2122/97           RADGVITRDVAKAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTL
Rv2592c|M.tuberculosis_H37Rv        RADGVITRDVAKAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTL
MAV_3473|M.avium_104                RADGVITRDVAKAALAVYDVDELGLDRLDRAVLTALTRSFGGGPVGVSTL
TH_1490|M.thermoresistible__bu      RADGVITRDVAKAALEVYDVDELGLDRLDRAVLTALTRSFGGGPVGVSTL
MAB_2882c|M.abscessus_ATCC_199      RADGVITVDVAKSALAVYDVDELGLDRLDRAVLLALTRSFGGGPVGLSTL
                                    ****:** *:** ** ***************** ******.*****:***

Mvan_2575|M.vanbaalenii_PYR-1       AVAVGEEATTVEEVCEPFLVRAGMIARTPRGRVATAQAWTHLGMKPPANA
MSMEG_2945|M.smegmatis_MC2_155      AVAVGEEATTVEEVCEPFLVRAGMIARTPRGRVATPLAWTHLGLQPP--V
Mflv_3824|M.gilvum_PYR-GCK          AVAVGEEATTVEEVCEPFLVRAGMIARTPRGRVATAQAWKHLGMTPPAGA
MMAR_2111|M.marinum_M               AVAVGEEASTVEEVCEPFLVRAGMVARTPRGRVATALAWTHLGMTPPAGA
MUL_1716|M.ulcerans_Agy99           AVAVGEEASTVEEVCEPFLVRAGMVARTPRGRVATALAWTHLGMTPPAGA
MLBr_00483|M.leprae_Br4923          AVAVGEEATTVEEVCEPFLVRAGMVARTPRGRVATAQAWTYLCMTPPVGV
Mb2623c|M.bovis_AF2122/97           AVAVGEEAATVEEVCEPFLVRAGMVARTPRGRVATALAWTHLGMTPPVGA
Rv2592c|M.tuberculosis_H37Rv        AVAVGEEAATVEEVCEPFLVRAGMVARTPRGRVATALAWTHLGMTPPVGA
MAV_3473|M.avium_104                AVAVGEEAATVEEVCEPFLVRAGMVARTPRGRVATAQAWTHLGMVPPAGA
TH_1490|M.thermoresistible__bu      AVAVGEEATTVEEVCEPFLVRAGMIARTPRGRVATAQAWTHLGLSPPAGV
MAB_2882c|M.abscessus_ATCC_199      AVAVGEESTTVEEVCEPFLVRAGMLARTPRGRVATPLAWTHLGLTPPPQL
                                    *******::***************:**********. **.:* : **   

Mvan_2575|M.vanbaalenii_PYR-1       VGLGQTGLFD--
MSMEG_2945|M.smegmatis_MC2_155      TGIGQAGLFD--
Mflv_3824|M.gilvum_PYR-GCK          GGLGQVGLFE--
MMAR_2111|M.marinum_M               N---QPGLFE--
MUL_1716|M.ulcerans_Agy99           N---QPGLFE--
MLBr_00483|M.leprae_Br4923          TGLSQPGLFES-
Mb2623c|M.bovis_AF2122/97           S---QPGLFE--
Rv2592c|M.tuberculosis_H37Rv        S---QPGLFE--
MAV_3473|M.avium_104                AGLGQPGLFD--
TH_1490|M.thermoresistible__bu      TAFGQPALFEEP
MAB_2882c|M.abscessus_ATCC_199      LG--QTGLFD--
                                        * .**: