For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
RDLVLTAFRPRTSPPTTASVLRSILWPLAIMAVIHRSYVLVFNRYITDDFAPVYRAVINFKFGWDIYNEN FGHVDPHYLYPPGGTLIIAPFGYLPEVASRNWFIFFNTVAIVLAGYFLLRLFNFTLASVAAPALLLAMFC TESVTNTLVFGNINGVILLLEVLFFRWLLDGNRSHEWWAGVSIGLTLVVKPLLAPLLLLPLLNRQWRALV TAFAVPVAFNLAAWPLISDPMNFVTRTVPYIFSTRDYFNSSILGNGLYYGLPMWLIMSLRIAFVVLGAAA LWLLYRYYRTRDPFFWMLTSSGVVLVTSWLVLSLGQGYYSIVLFPFLMTVVLPNSVIRNWVAWLAAYGFL TMDRWLLWQLPTTGRALEYLKITFGWSLMSVVVFSVLLFRYLDAKDDGRLDEGIDPPWMKQLTPADKAAE *
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_2488 | - | - | 100% (421) | putative integral membrane protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2692 | - | 1e-175 | 71.18% (406) | integral membrane protein |
M. gilvum PYR-GCK | Mflv_3915 | - | 0.0 | 89.93% (417) | putative integral membrane protein |
M. tuberculosis H37Rv | Rv2673 | - | 1e-175 | 71.18% (406) | integral membrane protein |
M. leprae Br4923 | MLBr_01338 | - | 1e-168 | 67.39% (414) | hypothetical protein MLBr_01338 |
M. abscessus ATCC 19977 | MAB_2978 | - | 1e-168 | 66.98% (427) | hypothetical protein MAB_2978 |
M. marinum M | MMAR_2043 | - | 1e-175 | 69.51% (410) | transmembrane protein |
M. avium 104 | MAV_3565 | - | 1e-177 | 70.49% (410) | hypothetical protein MAV_3565 |
M. smegmatis MC2 155 | MSMEG_2785 | - | 0.0 | 74.33% (413) | putative integral membrane protein |
M. thermoresistible (build 8) | TH_0624 | - | 0.0 | 78.48% (395) | POSSIBLE CONSERVED INTEGRAL MEMBRANE PROTEIN |
M. ulcerans Agy99 | MUL_3307 | - | 1e-175 | 69.27% (410) | transmembrane protein |
CLUSTAL 2.0.9 multiple sequence alignment Mvan_2488|M.vanbaalenii_PYR-1 -------MRDLVLTAFR--------PRTSPPTTASVLRSILWPLAIMAVI Mflv_3915|M.gilvum_PYR-GCK -----------MLTAFR--------PRTAPPTTATVLRSILWPLAIMAVI TH_0624|M.thermoresistible__bu -----------------------------------VLRSVLWPIAIMAVI MAB_2978|M.abscessus_ATCC_1997 -----MVSVDALVTGFKN----SLAPKTAPPSVATILRSVLWPVAIMAVI MSMEG_2785|M.smegmatis_MC2_155 MYCALVTATDSITTKLLN----AFRPRTSAPSTATVLRSVLWPIAILSVI Mb2692|M.bovis_AF2122/97 MYGALVTAADSIRTGLGASLLAGFRPRTGAPSTATILRSALWPAAVLSVL Rv2673|M.tuberculosis_H37Rv MYGALVTAADSIRTGLGASLLAGFRPRTGAPSTATILRSALWPAAVLSVL MMAR_2043|M.marinum_M MYGALVTAADSTRTGLRECMQAAFRPRTGPPSASAILRSVLWPAAILSVL MUL_3307|M.ulcerans_Agy99 MYGALVTAADSTRTGLRECMQAAFRPRTGPPSASAILRSVLWPAAILSVL MLBr_01338|M.leprae_Br4923 MYGALVTAADSTQTGLRNWLLAVFHPRTHTPSTATIVRSALWPAAILSVL MAV_3565|M.avium_104 MYGALVTAAES--TGLRDWIQAAFRPRTSAPSVATVLRSALWPIAIFSVL ::** *** *:::*: Mvan_2488|M.vanbaalenii_PYR-1 HRSYVLVFNRYITDDFAPVYRAVINFKFGWDIYNENFGHVDPHYLYPPGG Mflv_3915|M.gilvum_PYR-GCK HRSYVLVFNRYITDDFAPVYRAVINFKFGWDIYNEHFDHVDPHYLYPPGG TH_0624|M.thermoresistible__bu HRSWVLSTNRSITDDFTPVYNAAVAFLRGQPVYTANFNHVDPHFLYPPGG MAB_2978|M.abscessus_ATCC_1997 HRSYVLGTNGYITDDFGPVYRAVIAFKLHQPVYGENFNYVDPHYIYPPGG MSMEG_2785|M.smegmatis_MC2_155 HRSYVLGTNGYITDDFGPVYRAVINFKLGLDIYNEQFDHVDPHYLYPPGG Mb2692|M.bovis_AF2122/97 HRSIVLTTNGNITDDFKPVYRAVLNFRRGWDIYNEHFDYVDPHYLYPPGG Rv2673|M.tuberculosis_H37Rv HRSIVLTTNGNITDDFKPVYRAVLNFRRGWDIYNEHFDYVDPHYLYPPGG MMAR_2043|M.marinum_M HRAIVLTTNGNITDDFKPVYRAVLNFRRGWDIYNEHFDYVDPHYLYPPGG MUL_3307|M.ulcerans_Agy99 HRAIVLTTNGNITDDFKPVYRAVLNFRRGWDIYNEHFDYVDPHYLYPPGG MLBr_01338|M.leprae_Br4923 HRSTVITTNGNITDDFKPVYRAVLNFRHGWDIYNEHFDYVDPHYLYPPGG MAV_3565|M.avium_104 HRSIVVTTNGNITDDFKPVYRAVLNFRRGWDIYNEHFDYVDPHYLYPPGG **: *: * ***** ***.*.: * :* :*.:****::***** Mvan_2488|M.vanbaalenii_PYR-1 TLIIAPFGYLPEVASRNWFIFFNTVAIVLAGYFLLRLFNFTLASVAAPAL Mflv_3915|M.gilvum_PYR-GCK TLIIAPFGYLPEVASRNWFIFFNTVAIILAGYFLLRLFNYTLSSVAAPAL TH_0624|M.thermoresistible__bu TLLMAPFGYLTPDVSRGWFIFFNTVAIVLAAYFLLRLFNFTLASVAAPAL MAB_2978|M.abscessus_ATCC_1997 TLLLAPFGYLPVDASRYWFITINTIAIVIAAYFLLRLFNFTLASVAAPAL MSMEG_2785|M.smegmatis_MC2_155 TLLLAPFGYLPVDASRYWYISFNVLAFLIAAYLMLRIFDYTLSSVAAPAL Mb2692|M.bovis_AF2122/97 TLLMAPFGYLPFAPSRYLFISINTAAILVAAYLLLRMFNFTLTSVAAPAL Rv2673|M.tuberculosis_H37Rv TLLMAPFGYLPFAPSRYLFISINTAAILVAAYLLLRMFNFTLTSVAAPAL MMAR_2043|M.marinum_M TLLMAPFGYLPFAPSRYLFISINTAAILLAAYLLLRLFNFTLTSVAAPAL MUL_3307|M.ulcerans_Agy99 TLLMAPFGYLPFAPSRYLFISINTAAILLAAYLLLRLFNFTLTSVAAPAL MLBr_01338|M.leprae_Br4923 TLLMAPFGYLPFAPSRYLFILINTGAILIAWYLILRLFKYTLSSVAAPTL MAV_3565|M.avium_104 TLLMAPFGYLPEYPSRYLFILINTVAILIAWYLLLRLFGYTLSSVAAPAL **::******. ** :* :*. *:::* *::**:* :**:*****:* Mvan_2488|M.vanbaalenii_PYR-1 LLAMFCTESVTNTLVFGNINGVILLLEVLFFRWLLDG----NRSHEWWAG Mflv_3915|M.gilvum_PYR-GCK LLAMFCTESVTNTLVFGNINGVLLLLEVLFFRWLLDG----NRNHEWLAG TH_0624|M.thermoresistible__bu LLAMFCTETVTNTLVFTNINGILLLLEVLFLRWLLDG----EKRHEWLAG MAB_2978|M.abscessus_ATCC_1997 LLAMFCTESVTNTLVFTNINGVVLLLEVLFFRWLLHG----TKKSEWLAG MSMEG_2785|M.smegmatis_MC2_155 VLAMFCTESVTNTLVFTNINGCMLLGAVLFFRWLLKG----GRNAELLAG Mb2692|M.bovis_AF2122/97 ILAMFATETVTNTLVFTNINGCILLLEVLFLRWLLDG----RASRQWCGG Rv2673|M.tuberculosis_H37Rv ILAMFATETVTNTLVFTNINGCILLLEVLFLRWLLDG----RASRQWCGG MMAR_2043|M.marinum_M VLAMFATETVTNTLVFTNINGCILLLEVLFLRWLLDG----RVSHQWWAG MUL_3307|M.ulcerans_Agy99 VLAMFTTETVTNTLVFTNINGCILLLEVLFLRWLLDG----RVSHQWWAG MLBr_01338|M.leprae_Br4923 LLAMFCTETVTSTLVFTNINGCIMLLEVLFLWWLINGSEPKTVSQQWWAG MAV_3565|M.avium_104 LLAMFCTETVTNTLVFTNINGCVLLAEMLFLRWLLDG----RVGRQWWAG :**** **:**.**** **** ::* :**: **:.* : .* Mvan_2488|M.vanbaalenii_PYR-1 VSIGLTLVVKPLLAPLLLLPLLNRQWRALVTAFAVPVAFNLAAWP----- Mflv_3915|M.gilvum_PYR-GCK ISIGLTLVVKPLLAPLLLLPLLNRQWRALVAAFVVPLVFNAAAWP----- TH_0624|M.thermoresistible__bu VSIGLTLVVKPLLAPLLLLPVLNRQWRALVTAFAVPLAFNAAAWP----- MAB_2978|M.abscessus_ATCC_1997 VAIGLTLVIKPLLAPLLLLPLLNRQWRVFAAAFGIPAFFNLVALYGPRKV MSMEG_2785|M.smegmatis_MC2_155 AAIGLTLVVKPSLAPLLLLPVLNRQFYTLITAFGVPLVFNIAAWP----- Mb2692|M.bovis_AF2122/97 LAIGLTLVLKPLLGPLLLLPLLNRQWRALVAAVVVPVVVNVAALP----- Rv2673|M.tuberculosis_H37Rv LAIGLTLVLKPLLGPLLLLPLLNRQWRALVAAVVVPVVVNVAALP----- MMAR_2043|M.marinum_M IAIGFTLVLKPLLGPLLLLPLLNRQWRTLVTAIVIPIVINLAALP----- MUL_3307|M.ulcerans_Agy99 IAIGFTLVLKPLLGPLLLLPLLNRQWRTLVTAIVIPIVINLAALP----- MLBr_01338|M.leprae_Br4923 GAIGLTLVLKPLLGPLLCLPLLNRQWQALVPAIALPVVINLAALP----- MAV_3565|M.avium_104 VAIGLTLTLKPVLGPLLLLPLLNRQWRALVPAFAIPILINAAAWP----- :**:**.:** *.*** **:****: .: .*. :* .* .* Mvan_2488|M.vanbaalenii_PYR-1 LISDPMNFVTRTVPYIFSTRDYFNSSILGNGLYYGLPMWLIMSLRIAFVV Mflv_3915|M.gilvum_PYR-GCK LISDPMNFVTRTVPYILSTRDYFNSSILGNGLYYGLPMWLIMTLRVTIIV TH_0624|M.thermoresistible__bu LVADPMNFVTRTVPYILSTRDYFNSSILGNGVYYGLPTWLIILLRIGFGL MAB_2978|M.abscessus_ATCC_1997 RIVDGWDYLRRTVKYLGETRDYFNSSIAGNGLYYGLPEPLIAFLRIAFLA MSMEG_2785|M.smegmatis_MC2_155 LVPDPMNFVRHTVPYIMSTRDYFNSSIVGNGIYYGLPMWLILLLRVVFLL Mb2692|M.bovis_AF2122/97 LVSDPMSFFTRTLPYILGTRDYFNSSILGNGVYFGLPTWLILFLRILFTA Rv2673|M.tuberculosis_H37Rv LVSDPMSFFTRTLPYILGTRDYFNSSILGNGVYFGLPTWLILFLRILFTA MMAR_2043|M.marinum_M LINHPMDFFTRTLPYILGTRDYFNSSIQGNGIYFGLPTWLILFLRLLFTA MUL_3307|M.ulcerans_Agy99 LINHPMDFFTRTLPYILGTRDYFNSSIQGNGIYFGLPTWLILFLRLLFTA MLBr_01338|M.leprae_Br4923 LVSHPMDFFTRTVPYILGTRDYFNSSIEGNGVYFGLPTWLIVFLRLLFTV MAV_3565|M.avium_104 LVSDPMDFVTRTLPYIGGVRDYFNSSIEGNGVYFGLPTWLIVFMRILFTL : . .:. :*: *: .******** ***:*:*** ** :*: : Mvan_2488|M.vanbaalenii_PYR-1 LGAAALWLLYRYYRTRDPFFWMLTSSGVVLVTSWLVLSLGQGYYSIVLFP Mflv_3915|M.gilvum_PYR-GCK LGAISLWLLYRHYRTRDPFFWMLTSSGVLLTTSWLALSLGQGYYSIALFP TH_0624|M.thermoresistible__bu LAVVALVLLYRYYRTRDPLLWMTTSAGVLLIASWLVLSLGQGYYSMMLFP MAB_2978|M.abscessus_ATCC_1997 IALVSVWLLYKYYRRRDPRFWALTTGGVLLTASFLLLGLGQGYYSMALFP MSMEG_2785|M.smegmatis_MC2_155 LAVGSLWLLYRYYRERDPRFWLLTSSGVLLTASFLLLSLGQGYYSTMLFP Mb2692|M.bovis_AF2122/97 ITFGALWLLYRYYRTGDPLFWFTTSSGVLLLWSWLVMSLAQGYYSMMLFP Rv2673|M.tuberculosis_H37Rv ITFGALWLLYRYYRTGDPLFWFTTSSGVLLLWSWLVMSLAQGYYSMMLFP MMAR_2043|M.marinum_M IAIASLWLLYRYYRTRDPLFWFTTSSGVLLLWSWLAMSLAQGYYSMMLFP MUL_3307|M.ulcerans_Agy99 IAIASLWLLYRYYRTRDPLFWFTTSSGVLLLWSWLAMSLAQGYYSMMLFP MLBr_01338|M.leprae_Br4923 LAICSLWLLNRYYRTRDPLFWFTCSTGVLLLWSWLVLPLAQGYYSMMLFP MAV_3565|M.avium_104 IAIGALWLLYRYYRTRDPRFWFTNSAGVLLLWSWLVLPLAQGYYSMMLFP : :: ** ::** ** :* : **:* *:* : *.***** *** Mvan_2488|M.vanbaalenii_PYR-1 FLMTVVLPNSVIRNWVAWLAAYGFLTMDRWLLWQ---LPTTGRALEYLKI Mflv_3915|M.gilvum_PYR-GCK FLMTVVLPNSVIRSWVAWLAAYGFLTMDRWLLWQ---LPSTGRAFEYLKI TH_0624|M.thermoresistible__bu FLMTVVLPNSVIRNWVAWLAVYGFMTMDRWLIVRPVEMLTTGRFLEYMKI MAB_2978|M.abscessus_ATCC_1997 FVMTIVLPNSVLRNWPAWLAVYGFFSMDRWLLGH---WPTTGRALEYLKI MSMEG_2785|M.smegmatis_MC2_155 FLMTVVLPNSVLRNWPAWLAIYGFMTMDRWLLGH---WPTTGRFLEYMKI Mb2692|M.bovis_AF2122/97 FLMTVVLPNSVIRNWPAWLGVYGFMTLDRWLLFN---WMRWGRALEYLKI Rv2673|M.tuberculosis_H37Rv FLMTVVLPNSVIRNWPAWLGVYGFMTLDRWLLFN---WMRWGRALEYLKI MMAR_2043|M.marinum_M FLMTITLRNSVIRNWPAWLGIYGFMTLDRWLLFN---WMRWGRALEYLKI MUL_3307|M.ulcerans_Agy99 FLMTITLRNSVIRNWPAWMGIYGFMTLDRWLLFN---WMRWGRALEYLKI MLBr_01338|M.leprae_Br4923 FLMTVVLPNSLIRNWPAWLGIYGFLTLDRWLLFN---WMRYGRALEYLKI MAV_3565|M.avium_104 FLMTVVLPNSLIRNWPAWLGIYGFMTLDRWLLFN---WMRYGRALEYLKI *:**:.* **::*.* **:. ***:::****: . ** :**:** Mvan_2488|M.vanbaalenii_PYR-1 TFGWSLMSVVVFSVLLFRYLDAKDDGRLDEGIDPPWMK----QLTPADKA Mflv_3915|M.gilvum_PYR-GCK TYGWSLMMVVVFAVLLFRYLDARQDNRLDEGIDPAWMK----QLTPAAKP TH_0624|M.thermoresistible__bu TYGWSLMLIVVTTVLYFRYLDAKADGRLDEGIDPPWLQKSKAEPVPATTS MAB_2978|M.abscessus_ATCC_1997 TYGWCLLLIVVMMVLVLRYRDARAAGTLDQGLDPEWMRAQTGTKESATDD MSMEG_2785|M.smegmatis_MC2_155 TYGWSLMLVVVFCVLYFRYLDAKQDGRLDQGIDPPWMAR---ERTPAPV- Mb2692|M.bovis_AF2122/97 TYGWSLLLIVTFTVLYFRYLDAKADNRLDGGIDPAWLTP---EREGQR-- Rv2673|M.tuberculosis_H37Rv TYGWSLLLIVTFTVLYFRYLDAKADNRLDGGIDPAWLTP---EREGQR-- MMAR_2043|M.marinum_M TYGWSLLLIVTFTVLYFRYLDAKAEDRLDSGIDPAWLTA---ERERASVD MUL_3307|M.ulcerans_Agy99 TYGWSLLLIVTFTVLYFRYLDAKAEDRLDSGIDPAWLTA---ERERASVD MLBr_01338|M.leprae_Br4923 TYGWSLLLIVVSTVLCFRYLDAKAENRLDHGIDPAWLTA---ERERASVN MAV_3565|M.avium_104 TYGWSLLLIVVFSVLCYRYLDAKAEDRLDRGIDPAWLTA---GRE----- *:**.*: :*. ** ** **: . ** *:** *: Mvan_2488|M.vanbaalenii_PYR-1 AE------------------ Mflv_3915|M.gilvum_PYR-GCK SE------------------ TH_0624|M.thermoresistible__bu ASGS---------------- MAB_2978|M.abscessus_ATCC_1997 DIERPEGESDRRAVAGATDS MSMEG_2785|M.smegmatis_MC2_155 -------------------- Mb2692|M.bovis_AF2122/97 -------------------- Rv2673|M.tuberculosis_H37Rv -------------------- MMAR_2043|M.marinum_M A------------------- MUL_3307|M.ulcerans_Agy99 A------------------- MLBr_01338|M.leprae_Br4923 A------------------- MAV_3565|M.avium_104 --------------------