For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MASRLQDALADNAQIWGGWVVGPTVLGPEEFAAAGYDYVGFDVQHGYLSDADVALLLRRLEHVPIATVVR LPGVDAAPIGRVLDAGADGVVIAMVESAAQAAAAVAATRYAPGGVRSFGPLRAGLGIEPAALQARASVFA MVETARGLAAIDEICRVEGLTGIYVGPADLAISLGHGPTEAWTRPDVLNAMQHLQRTAAKAGLVTGIHAN TGTIGNAMAQKGFQMITLASESQALRRGAAAHLAEATGQSVAPGQQRYC
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_2241 | - | - | 100% (259) | HpcH/HpaI aldolase |
M. vanbaalenii PYR-1 | Mvan_6019 | - | 2e-18 | 31.08% (222) | HpcH/HpaI aldolase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_4105 | - | 1e-112 | 78.40% (250) | HpcH/HpaI aldolase |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_0401 | - | 2e-91 | 69.23% (247) | hypothetical protein MMAR_0401 |
M. avium 104 | MAV_5121 | - | 6e-94 | 70.20% (245) | HpcH/HpaI aldolase/citrate lyase family protein |
M. smegmatis MC2 155 | MSMEG_2565 | - | 1e-101 | 72.37% (257) | 4-hydroxy-2-oxovalerate aldolase |
M. thermoresistible (build 8) | TH_0281 | - | 2e-47 | 65.73% (143) | 4-hydroxy-2-oxovalerate aldolase |
M. ulcerans Agy99 | MUL_1051 | - | 5e-89 | 67.61% (247) | hypothetical protein MUL_1051 |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_0401|M.marinum_M MKVVSNLQQRLGRGTPLWGGWITGPTWLGPEEFARAGYDYVGFDTQHGYL MUL_1051|M.ulcerans_Agy99 MKVVSNLQQRLGRGTPLWGGWITGPTWLGPEEFARAGYDYVGFDTQHGYL MAV_5121|M.avium_104 MTAPSNLRLALNRRTPIFGGWVTGPTLLGPEEFARAGYDYVGFDAQHGYL Mvan_2241|M.vanbaalenii_PYR-1 --MASRLQDALADNAQIWGGWVVGPTVLGPEEFAAAGYDYVGFDVQHGYL Mflv_4105|M.gilvum_PYR-GCK --MTSRLQQALSSGGPVWGGWVVGPTVIGPEEYAAAGYDYVGIDVQHSYL MSMEG_2565|M.smegmatis_MC2_155 -MTASRLQQALADRQTVWGGWVVGPTILGPEEFAAAGYDYVGFDVQHGYL TH_0281|M.thermoresistible__bu -------------------------------------------------- MMAR_0401|M.marinum_M DDADVAGLLRRLEGVPIATVVRLPNADPAPIGRVLDAGADAVIIAMIESA MUL_1051|M.ulcerans_Agy99 DDADVAGLLRRLEGVPIATVVRLPNADPGPIGRVLDAGADAVIIAMIESA MAV_5121|M.avium_104 DDADIAGVLRRIEHLPIGTVVRLPNADAAPIGRVADAGADAVVIAMIESP Mvan_2241|M.vanbaalenii_PYR-1 SDADVALLLRRLEHVPIATVVRLPGVDAAPIGRVLDAGADGVVIAMVESA Mflv_4105|M.gilvum_PYR-GCK SDADVALMLRRLEHVPIATVVRLPDAAPAPIGRVLDAGADGVIIAMVESA MSMEG_2565|M.smegmatis_MC2_155 DDADVALLLRRLEHVPIATAVRLPSPDPAPIGRVLDAGADAVIIAMVETP TH_0281|M.thermoresistible__bu -------------------------------------------------- MMAR_0401|M.marinum_M EQAAAAVAATRYPPAGVRSYGPLRASLGTDPAELQSRAGVYAMVETAAAL MUL_1051|M.ulcerans_Agy99 EQAAAAVAATRYPPAGVRSYGPLRASLGTDPAELQSRAGVYAMVETAAAV MAV_5121|M.avium_104 DQAAAAVAATRYPPAGVRSFGPLRVSLGHDPAAHESRVSVFAMIETAAAL Mvan_2241|M.vanbaalenii_PYR-1 AQAAAAVAATRYAPGGVRSFGPLRAGLGIEPAALQARASVFAMVETARGL Mflv_4105|M.gilvum_PYR-GCK ADAAAAVAATRYAPGGVRSFGPLRASLGLDPSALQERASVFAMIETTRGL MSMEG_2565|M.smegmatis_MC2_155 EQAAAALAATRYAPEGVRSFGPLRASLGHDTVALQERASVIAMIETATGV TH_0281|M.thermoresistible__bu ------VAATRYPPSGVRSFGPLRSDLGHDPTVLQDRVAVFAMVETIRGV :*****.* ****:**** .** :. : *..* **:** .: MMAR_0401|M.marinum_M STIDDICAVDGLAGIYVGPADLAISLGTGVVGALDHPAVRQAVVGIHRAA MUL_1051|M.ulcerans_Agy99 STIDDICAVDGPAGIYVGPADLAISLGTGVVGALDHAAVRQAVVGIHRAA MAV_5121|M.avium_104 SGITQICAVDGLTGIYVGPADLAISLGAGVIGATRQPEVLDAIVHIHKAA Mvan_2241|M.vanbaalenii_PYR-1 AAIDEICRVEGLTGIYVGPADLAISLGHGPTEAWTRPDVLNAMQHLQRTA Mflv_4105|M.gilvum_PYR-GCK AAVDEICRVDGLTGIYVGPADLAISMGHGPTDAWSRRDVFDVILTAQRAA MSMEG_2565|M.smegmatis_MC2_155 AAVQDIAAVAGLTGLYVGPADLAISMGNQPTDAWTHPDVLAAFVTVRQAA TH_0281|M.thermoresistible__bu RNIAEICAVPGLSGIYVGPADLSLSMGHGPGGAGRVTEVDDTIDRIQQAA : :*. * * :*:*******::*:* * * .. :::* MMAR_0401|M.marinum_M SAASLHTGIHAGAAKAGKAMAQLGFEMITLAAESQALRRGAAEYLNEATA MUL_1051|M.ulcerans_Agy99 SAANLHTGIHAGAAKAGKAMAQLGFEMITLAAESQALRRGAAEYLNEATA MAV_5121|M.avium_104 TKAGLVTGIHAGDGSTGHAMAQLGFDMITLAAEAQALRRGAAEHLREATQ Mvan_2241|M.vanbaalenii_PYR-1 AKAGLVTGIHANTGTIGNAMAQKGFQMITLASESQALRRGAAAHLAEATG Mflv_4105|M.gilvum_PYR-GCK AAAGVVSGIHASAGSAGNMLAQNGFQMITLASESQALRRGAAAHLSDARG MSMEG_2565|M.smegmatis_MC2_155 DAAGLAGGIHAGTGRAGKAAADMGFRMITLASESQALRRGAVEHLDEATG TH_0281|M.thermoresistible__bu ASAGLVTGIHAGDGAAGRAMAARGFRVITLASEGQALRRGAAAHLAEATA *.: ****. . *. * ** :****:*.*******. :* :* MMAR_0401|M.marinum_M GTR---------------- MUL_1051|M.ulcerans_Agy99 GTR---------------- MAV_5121|M.avium_104 ------------------- Mvan_2241|M.vanbaalenii_PYR-1 QSVAPGQQRYC-------- Mflv_4105|M.gilvum_PYR-GCK ES---GDGR---------- MSMEG_2565|M.smegmatis_MC2_155 AGGGHEQRGYL-------- TH_0281|M.thermoresistible__bu PRDDLPETSTTPGSSGRYH