For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VSSGYDGAPMVACPHGHLNAWNYKFCGQCGSPIGVVAFPDDDAVAEDERPLRRRGLAVGGAIAAVLLAVI VAAVGFLMTRSSTGDDEAAPQAGGFTPGTVNPAGMVPACTTAPLVQAESVDMTADGMTVDAAFMSQCPGG NTEASTSARITVADGQRDIAAGVFDFSTAPLTMKPGETARRTLVFPAGTYWRTTEMFTGAPQLVFHPGEQ AEASTAASSGSDRLVAQTVAQPAHGSIDGVADAVLRELRDADYGYVSGSLANRWVPQISAKKSGLVVNGR TLTSADVLRDHLDLREKYSGVRLVSSAQWTTFSSADFWVTVVGAPKLSPAEANAWCDANRLGVNDCFAKF VSSLFGVDGTTAYRK
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_1128 | - | - | 100% (365) | hypothetical protein Mvan_1128 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0637 | - | 1e-104 | 51.80% (361) | hypothetical protein Mb0637 |
M. gilvum PYR-GCK | Mflv_5184 | - | 1e-168 | 78.96% (366) | hypothetical protein Mflv_5184 |
M. tuberculosis H37Rv | Rv0621 | - | 9e-90 | 50.76% (329) | hypothetical protein Rv0621 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | - | - | - | - | - |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | MSMEG_1190 | - | 5e-26 | 29.45% (343) | serine/threonine-protein kinase PknD |
M. thermoresistible (build 8) | TH_1429 | - | 1e-21 | 47.57% (103) | serine/threonine-protein kinase PknD |
M. ulcerans Agy99 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment Mvan_1128|M.vanbaalenii_PYR-1 -------------------------------------------------- Mflv_5184|M.gilvum_PYR-GCK -------------------------------------------------- Mb0637|M.bovis_AF2122/97 -------------------------------------------------- Rv0621|M.tuberculosis_H37Rv -------------------------------------------------- MSMEG_1190|M.smegmatis_MC2_155 MALSQGAKIAGYTVERMLGSGGMGEVYLAQHPRLPRHDALKVLRANISAD TH_1429|M.thermoresistible__bu -------------------------------------------------- Mvan_1128|M.vanbaalenii_PYR-1 -------------------------------------------------- Mflv_5184|M.gilvum_PYR-GCK -------------------------------------------------- Mb0637|M.bovis_AF2122/97 -------------------------------------------------- Rv0621|M.tuberculosis_H37Rv -------------------------------------------------- MSMEG_1190|M.smegmatis_MC2_155 PAYVERFNKEADLAAKLWHPHIVGIHDRGKHRNRLWISMDFVDGTDASRL TH_1429|M.thermoresistible__bu -------------------------------------------------- Mvan_1128|M.vanbaalenii_PYR-1 -------------------------------------------------- Mflv_5184|M.gilvum_PYR-GCK -------------------------------------------------- Mb0637|M.bovis_AF2122/97 -------------------------------------------------- Rv0621|M.tuberculosis_H37Rv -------------------------------------------------- MSMEG_1190|M.smegmatis_MC2_155 LHDRYPDGMPVPEVLDIVKAVAAALDYAHGRGLLHRDVKPANILISDGDH TH_1429|M.thermoresistible__bu -------------------------------------------------- Mvan_1128|M.vanbaalenii_PYR-1 ----------------------------MSSGYDG-----APMVACPHGH Mflv_5184|M.gilvum_PYR-GCK ----------------------------MSDGFDG-----TPMVVCPHGH Mb0637|M.bovis_AF2122/97 ---------------MAGDRGADPGPANVTPGADDHAQHASPTVLCPQGH Rv0621|M.tuberculosis_H37Rv ---------------MAGDRGADPGPANVTPGADDHAQHASPTVLCPQGH MSMEG_1190|M.smegmatis_MC2_155 GERRILLGDFGVARDLGDSAGNGLTATNMTVGTAAYAAPEQLMGLELDGR TH_1429|M.thermoresistible__bu -------------------------------------------------- Mvan_1128|M.vanbaalenii_PYR-1 LNAWNYKFCGQCGSPIG--------------------------------- Mflv_5184|M.gilvum_PYR-GCK LNAWHYKFCGQCGSPIG--------------------------------- Mb0637|M.bovis_AF2122/97 VNAWDYRFCERCGSPIG--------------------------------- Rv0621|M.tuberculosis_H37Rv VNAWDYRFCERCGSPIG--------------------------------- MSMEG_1190|M.smegmatis_MC2_155 ADQYSLAATAYHLLTGGPLFENSNPAVVIGQHLNAPPPALGDSRPELAPL TH_1429|M.thermoresistible__bu -------------------------------------------------- Mvan_1128|M.vanbaalenii_PYR-1 ------------------VVAFPDDDAVAEDERPLRRRGLAVGGAIAAVL Mflv_5184|M.gilvum_PYR-GCK ------------------AVAFPDDDPVEVERRP-RRRGLLIGGAVAAVV Mb0637|M.bovis_AF2122/97 ------------------VVPWPSEESGTRQTAPARSFVPLVVLAATLLV Rv0621|M.tuberculosis_H37Rv ------------------VVPWPSEESGTRQTAPARSFVPLVVLAATLLV MSMEG_1190|M.smegmatis_MC2_155 DAALSRALAKNPDDRFATCTDFANALEHPQNHAATMTAPVPSPNDVPTML TH_1429|M.thermoresistible__bu -------------------------------------------------- Mvan_1128|M.vanbaalenii_PYR-1 LAVIVAAVGFLMTRSSTGDDEAAPQA-GGFTPGTVNPAGMVPACTTAPLV Mflv_5184|M.gilvum_PYR-GCK VIAAAVAVTVLMAGSSS-DDVAVPQS-GGFGAGPVDPAGMVPACTTPPLV Mb0637|M.bovis_AF2122/97 VAVVVTAVGYAVTRPARNDREEPSSARGAATTGVPFAQAEAASCPDDPVL Rv0621|M.tuberculosis_H37Rv VAVVVTAVGYAVTRPARNDREEPSSARGAATTGVPFAQAEAASCPDDPVL MSMEG_1190|M.smegmatis_MC2_155 APVAVPYPSGPAAPPPPNGSRYRRVALAAAAAAVVVAVVAAAALLIKPTE TH_1429|M.thermoresistible__bu -------------------------------------------------- Mvan_1128|M.vanbaalenii_PYR-1 QAESVDMTADG------------MTVDAAFMSQCPGGNTEASTSARITVA Mflv_5184|M.gilvum_PYR-GCK QAESVDMTGDG------------MTVDAAFMSRCAGGDTATAASVRITVA Mb0637|M.bovis_AF2122/97 EAESIDLTSDG------------LAVSAAFMSACAGGDVESNSALEVTVA Rv0621|M.tuberculosis_H37Rv EAESIDLTSDG------------LAVSAAFMSACAGGDVESNSALEVTVA MSMEG_1190|M.smegmatis_MC2_155 EAPSAEPFSIAGTLQLPPDVVKTNGLPSGFMCAGTSDYGDIGPETPITVE TH_1429|M.thermoresistible__bu -------------------------------------------------- Mvan_1128|M.vanbaalenii_PYR-1 DGQRDIAAG-------------VFDFSTAPLTMKPGETARRTLVFPAGTY Mflv_5184|M.gilvum_PYR-GCK DGQRDIAAG-------------IFDFSAAPLTMKPGETARRTLVFPAGMY Mb0637|M.bovis_AF2122/97 DGRRDVAAG-------------SFDFSADPLRIEPGVPARRTLVFPPGMY Rv0621|M.tuberculosis_H37Rv DGRRDVAAG-------------SFDFSADPLRIEPGVPARRTLVFPPGMY MSMEG_1190|M.smegmatis_MC2_155 NESGELLAKGAIESSSKGGNGCFLKFRVDDVPSG-ARFYRVHVAQRAEMS TH_1429|M.thermoresistible__bu -------------------------------------------------- Mvan_1128|M.vanbaalenii_PYR-1 WRTTEMFTGAPQLVFHPGEQAEASTA-ASSGSDRLVAQTVAQPAHGSIDG Mflv_5184|M.gilvum_PYR-GCK WRTTEMFSGAPQMVVHPGEQSDATTATASSGSDRLVAHAVAEPEHGSIDG Mb0637|M.bovis_AF2122/97 WRTPDMLSGAPALAATRKGRSDRSAARGGSARTTMVAAASAAPAYGSINA Rv0621|M.tuberculosis_H37Rv WRTPDMLSGAPALAATRKGRSDRSAARGGSARTTMVAAASAAPAYGSINA MSMEG_1190|M.smegmatis_MC2_155 YTEEEAKAGIQFLLGTVHDEPTPTTTAPPAKASPPPTATRTVTVTPKAED TH_1429|M.thermoresistible__bu -------------------------------------------------- Mvan_1128|M.vanbaalenii_PYR-1 VADAVLRELRDADYGYVSGSLANRWVPQISAKKSGLVVNGRTLTSADVLR Mflv_5184|M.gilvum_PYR-GCK VAEAVLRELRDADYGYVSTSIANRWVPQISAKKAGLVVDGATITSADVLR Mb0637|M.bovis_AF2122/97 VAGAVLVELRDSDFPYVRVGIANRWVPQVSSKRVGLVAAGKTWTSADILR Rv0621|M.tuberculosis_H37Rv VAGAVLVELRDSDFPYVRVGIANRWVPQVSSKRVGLVAAGKTWTSADILR MSMEG_1190|M.smegmatis_MC2_155 TSLQRLRALANNDRPYVAAILADQWVPQISSKRAGLVADGVTWDNARILD TH_1429|M.thermoresistible__bu --------------------XADRWVPQLSSKRPGIVDKGVTWDNALTLQ *::****:*:*: *:* * * .* * Mvan_1128|M.vanbaalenii_PYR-1 DHLDLREKYSGVRLVSSAQWTTFSSADFWVTVVGAPKLSPAEANAWCDAN Mflv_5184|M.gilvum_PYR-GCK DHYGLRAKHSGVRLVSSAQWTTFDSDDFWVTVVGAPKLSPAEANGWCDAN Mb0637|M.bovis_AF2122/97 DHLALRQRFGGARLVWSGHWTTFSGPDFWVTVVGPAQPTAAEANRWCDSN Rv0621|M.tuberculosis_H37Rv DHLALRQRFGGARLVWSGHWTTFSGPDFWVTVVGPAQPTAAEANR----- MSMEG_1190|M.smegmatis_MC2_155 QHMRMRATYPDVRLLWSGDWSTYDGRDFWVTIVGLTSDNPGEILAWCSSA TH_1429|M.thermoresistible__bu EHLLLRQRY-DAVLVWSGDWSTFDAPNYWVTIVPVTFATPDGALAWCRAQ :* :* . .. *: *..*:*:.. ::***:* . .. Mvan_1128|M.vanbaalenii_PYR-1 RLGVNDCFAKFVSSLFGVDGTTAYRK Mflv_5184|M.gilvum_PYR-GCK RLGVDDCFAKFVSTLFGVEGTTAYRK Mb0637|M.bovis_AF2122/97 GFGADDCFAKFISTLVGAKGTTVYRK Rv0621|M.tuberculosis_H37Rv -------------------------- MSMEG_1190|M.smegmatis_MC2_155 GFDRDNCAAKVVSTWRPIAGSTKYN- TH_1429|M.thermoresistible__bu GLGRNDCYAKLVSTTHPVRGSTAHN-