For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MAGDRGADPGPANVTPGADDHAQHASPTVLCPQGHVNAWDYRFCERCGSPIGVVPWPSEESGTRQTAPAR SFVPLVVLAATLLVVAVVVTAVGYAVTRPARNDREEPSSARGAATTGVPFAQAEAASCPDDPVLEAESID LTSDGLAVSAAFMSACAGGDVESNSALEVTVADGRRDVAAGSFDFSADPLRIEPGVPARRTLVFPPGMYW RTPDMLSGAPALAATRKGRSDRSAARGGSARTTMVAAASAAPAYGSINAVAGAVLVELRDSDFPYVRVGI ANRWVPQVSSKRVGLVAAGKTWTSADILRDHLALRQRFGGARLVWSGHWTTFSGPDFWVTVVGPAQPTAA EANRWCDSNGFGADDCFAKFISTLVGAKGTTVYRK
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0637 | - | - | 100% (385) | hypothetical protein Mb0637 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_5184 | - | 1e-101 | 51.11% (360) | hypothetical protein Mflv_5184 |
M. tuberculosis H37Rv | Rv0621 | - | 0.0 | 100.00% (354) | hypothetical protein Rv0621 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | - | - | - | - | - |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | MSMEG_1190 | - | 8e-29 | 31.11% (360) | serine/threonine-protein kinase PknD |
M. thermoresistible (build 8) | TH_1429 | - | 5e-25 | 49.51% (103) | serine/threonine-protein kinase PknD |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_1128 | - | 1e-104 | 51.80% (361) | hypothetical protein Mvan_1128 |
CLUSTAL 2.0.9 multiple sequence alignment Mb0637|M.bovis_AF2122/97 -------------------------------------------------- Rv0621|M.tuberculosis_H37Rv -------------------------------------------------- Mflv_5184|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_1128|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_1190|M.smegmatis_MC2_155 MALSQGAKIAGYTVERMLGSGGMGEVYLAQHPRLPRHDALKVLRANISAD TH_1429|M.thermoresistible__bu -------------------------------------------------- Mb0637|M.bovis_AF2122/97 -------------------------------------------------- Rv0621|M.tuberculosis_H37Rv -------------------------------------------------- Mflv_5184|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_1128|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_1190|M.smegmatis_MC2_155 PAYVERFNKEADLAAKLWHPHIVGIHDRGKHRNRLWISMDFVDGTDASRL TH_1429|M.thermoresistible__bu -------------------------------------------------- Mb0637|M.bovis_AF2122/97 -------------------------------------------------- Rv0621|M.tuberculosis_H37Rv -------------------------------------------------- Mflv_5184|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_1128|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_1190|M.smegmatis_MC2_155 LHDRYPDGMPVPEVLDIVKAVAAALDYAHGRGLLHRDVKPANILISDGDH TH_1429|M.thermoresistible__bu -------------------------------------------------- Mb0637|M.bovis_AF2122/97 ---------------MAGDRGADPGPANVTPGADDHAQHASPTVLCPQGH Rv0621|M.tuberculosis_H37Rv ---------------MAGDRGADPGPANVTPGADDHAQHASPTVLCPQGH Mflv_5184|M.gilvum_PYR-GCK ----------------------------MSDGFDG-----TPMVVCPHGH Mvan_1128|M.vanbaalenii_PYR-1 ----------------------------MSSGYDG-----APMVACPHGH MSMEG_1190|M.smegmatis_MC2_155 GERRILLGDFGVARDLGDSAGNGLTATNMTVGTAAYAAPEQLMGLELDGR TH_1429|M.thermoresistible__bu -------------------------------------------------- Mb0637|M.bovis_AF2122/97 VNAWDYRFCERCGSPIG--------------------------------- Rv0621|M.tuberculosis_H37Rv VNAWDYRFCERCGSPIG--------------------------------- Mflv_5184|M.gilvum_PYR-GCK LNAWHYKFCGQCGSPIG--------------------------------- Mvan_1128|M.vanbaalenii_PYR-1 LNAWNYKFCGQCGSPIG--------------------------------- MSMEG_1190|M.smegmatis_MC2_155 ADQYSLAATAYHLLTGGPLFENSNPAVVIGQHLNAPPPALGDSRPELAPL TH_1429|M.thermoresistible__bu -------------------------------------------------- Mb0637|M.bovis_AF2122/97 ------------------VVPWPSEESGTRQTAPARSFVPLVVLAATLLV Rv0621|M.tuberculosis_H37Rv ------------------VVPWPSEESGTRQTAPARSFVPLVVLAATLLV Mflv_5184|M.gilvum_PYR-GCK ------------------AVAFPDDDPVEVERRP-RRRGLLIGGAVAAVV Mvan_1128|M.vanbaalenii_PYR-1 ------------------VVAFPDDDAVAEDERPLRRRGLAVGGAIAAVL MSMEG_1190|M.smegmatis_MC2_155 DAALSRALAKNPDDRFATCTDFANALEHPQNHAATMTAPVPSPNDVPTML TH_1429|M.thermoresistible__bu -------------------------------------------------- Mb0637|M.bovis_AF2122/97 VAVVVTAVGYAVTRPARNDREEPSSARGAATTGVPFAQAEAASCPDDPVL Rv0621|M.tuberculosis_H37Rv VAVVVTAVGYAVTRPARNDREEPSSARGAATTGVPFAQAEAASCPDDPVL Mflv_5184|M.gilvum_PYR-GCK VIAAAVAVTVLMAGSSS-DDVAVPQS-GGFGAGPVDPAGMVPACTTPPLV Mvan_1128|M.vanbaalenii_PYR-1 LAVIVAAVGFLMTRSSTGDDEAAPQA-GGFTPGTVNPAGMVPACTTAPLV MSMEG_1190|M.smegmatis_MC2_155 APVAVPYPSGPAAPPPPNGSRYRRVALAAAAAAVVVAVVAAAALLIKPTE TH_1429|M.thermoresistible__bu -------------------------------------------------- Mb0637|M.bovis_AF2122/97 EAESIDLTSDG------------LAVSAAFMSACAGGDVESNSALEVTVA Rv0621|M.tuberculosis_H37Rv EAESIDLTSDG------------LAVSAAFMSACAGGDVESNSALEVTVA Mflv_5184|M.gilvum_PYR-GCK QAESVDMTGDG------------MTVDAAFMSRCAGGDTATAASVRITVA Mvan_1128|M.vanbaalenii_PYR-1 QAESVDMTADG------------MTVDAAFMSQCPGGNTEASTSARITVA MSMEG_1190|M.smegmatis_MC2_155 EAPSAEPFSIAGTLQLPPDVVKTNGLPSGFMCAGTSDYGDIGPETPITVE TH_1429|M.thermoresistible__bu -------------------------------------------------- Mb0637|M.bovis_AF2122/97 DGRRDVAAG-------------SFDFSADPLRIEPGVPARRTLVFPPGMY Rv0621|M.tuberculosis_H37Rv DGRRDVAAG-------------SFDFSADPLRIEPGVPARRTLVFPPGMY Mflv_5184|M.gilvum_PYR-GCK DGQRDIAAG-------------IFDFSAAPLTMKPGETARRTLVFPAGMY Mvan_1128|M.vanbaalenii_PYR-1 DGQRDIAAG-------------VFDFSTAPLTMKPGETARRTLVFPAGTY MSMEG_1190|M.smegmatis_MC2_155 NESGELLAKGAIESSSKGGNGCFLKFRVDDVPSG-ARFYRVHVAQRAEMS TH_1429|M.thermoresistible__bu -------------------------------------------------- Mb0637|M.bovis_AF2122/97 WRTPDMLSGAPALAATRKGRSDRSAARGGSARTTMVAAASAAPAYGSINA Rv0621|M.tuberculosis_H37Rv WRTPDMLSGAPALAATRKGRSDRSAARGGSARTTMVAAASAAPAYGSINA Mflv_5184|M.gilvum_PYR-GCK WRTTEMFSGAPQMVVHPGEQSDATTATASSGSDRLVAHAVAEPEHGSIDG Mvan_1128|M.vanbaalenii_PYR-1 WRTTEMFTGAPQLVFHPGEQAEASTA-ASSGSDRLVAQTVAQPAHGSIDG MSMEG_1190|M.smegmatis_MC2_155 YTEEEAKAGIQFLLGTVHDEPTPTTTAPPAKASPPPTATRTVTVTPKAED TH_1429|M.thermoresistible__bu -------------------------------------------------- Mb0637|M.bovis_AF2122/97 VAGAVLVELRDSDFPYVRVGIANRWVPQVSSKRVGLVAAGKTWTSADILR Rv0621|M.tuberculosis_H37Rv VAGAVLVELRDSDFPYVRVGIANRWVPQVSSKRVGLVAAGKTWTSADILR Mflv_5184|M.gilvum_PYR-GCK VAEAVLRELRDADYGYVSTSIANRWVPQISAKKAGLVVDGATITSADVLR Mvan_1128|M.vanbaalenii_PYR-1 VADAVLRELRDADYGYVSGSLANRWVPQISAKKSGLVVNGRTLTSADVLR MSMEG_1190|M.smegmatis_MC2_155 TSLQRLRALANNDRPYVAAILADQWVPQISSKRAGLVADGVTWDNARILD TH_1429|M.thermoresistible__bu --------------------XADRWVPQLSSKRPGIVDKGVTWDNALTLQ *::****:*:*: *:* * * .* * Mb0637|M.bovis_AF2122/97 DHLALRQRFGGARLVWSGHWTTFSGPDFWVTVVGPAQPTAAEANRWCDSN Rv0621|M.tuberculosis_H37Rv DHLALRQRFGGARLVWSGHWTTFSGPDFWVTVVGPAQPTAAEANR----- Mflv_5184|M.gilvum_PYR-GCK DHYGLRAKHSGVRLVSSAQWTTFDSDDFWVTVVGAPKLSPAEANGWCDAN Mvan_1128|M.vanbaalenii_PYR-1 DHLDLREKYSGVRLVSSAQWTTFSSADFWVTVVGAPKLSPAEANAWCDAN MSMEG_1190|M.smegmatis_MC2_155 QHMRMRATYPDVRLLWSGDWSTYDGRDFWVTIVGLTSDNPGEILAWCSSA TH_1429|M.thermoresistible__bu EHLLLRQRY-DAVLVWSGDWSTFDAPNYWVTIVPVTFATPDGALAWCRAQ :* :* . .. *: *..*:*:.. ::***:* . .. Mb0637|M.bovis_AF2122/97 GFGADDCFAKFISTLVGAKGTTVYRK Rv0621|M.tuberculosis_H37Rv -------------------------- Mflv_5184|M.gilvum_PYR-GCK RLGVDDCFAKFVSTLFGVEGTTAYRK Mvan_1128|M.vanbaalenii_PYR-1 RLGVNDCFAKFVSSLFGVDGTTAYRK MSMEG_1190|M.smegmatis_MC2_155 GFDRDNCAAKVVSTWRPIAGSTKYN- TH_1429|M.thermoresistible__bu GLGRNDCYAKLVSTTHPVRGSTAHN-