For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MARRAGWQVNNKRIRRLWREEGLRVPQRRRKTRLTGIGVAVGAMSPIRPNVIWAMDFQFDTAADGRTLKM LNVIDEFTREALAIEVDRAINADGVVDVLDRLALTHGAPRYVRFDNGPEFVAHAVADWCRFNSAGSLFID PGSPLLTG
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_1112 | - | - | 100% (148) | integrase, catalytic region |
| M. vanbaalenii PYR-1 | Mvan_1111 | - | 5e-77 | 93.75% (144) | integrase catalytic subunit |
| M. vanbaalenii PYR-1 | Mvan_5965 | - | 7e-05 | 31.82% (88) | integrase catalytic subunit |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_4763 | - | 2e-77 | 95.14% (144) | integrase catalytic subunit |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | MMAR_3784 | - | 4e-72 | 89.58% (144) | transposase, ISMyma01_aa2-like protein |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_1866 | - | 3e-26 | 42.07% (145) | transposase B |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment
Mvan_1112|M.vanbaalenii_PYR-1 --------------------------------------------------
Mflv_4763|M.gilvum_PYR-GCK MPASGDHRVDVAPLDCPVRRHESQRGQTAQGTRSRERPAQEAGRQPGPRH
MMAR_3784|M.marinum_M --------------------------------------------------
MSMEG_1866|M.smegmatis_MC2_155 --------------------------------------------------
Mvan_1112|M.vanbaalenii_PYR-1 --------------------------------------------------
Mflv_4763|M.gilvum_PYR-GCK RHAQGDFGGKLLTPNRKRSAVIALRERFGVSERRACTVVGLHRSTMRLTP
MMAR_3784|M.marinum_M ----------------------MLRERFGVSERRACTVVGLHRSTMRLQS
MSMEG_1866|M.smegmatis_MC2_155 ----------------------MLTTTMGMSERLACKAVGLARSTCRRLP
Mvan_1112|M.vanbaalenii_PYR-1 ---------------------------------MARR-AGWQVNNKRIRR
Mflv_4763|M.gilvum_PYR-GCK APVT--TEEAELRAWLRRFSTDRPRWGWRRAAKMARR-AGWKANNKRIRR
MMAR_3784|M.marinum_M APIT--TEEAELRAWLRRFSTDWPRWGWRRAAKMARR-AGWAVNNKRIRR
MSMEG_1866|M.smegmatis_MC2_155 LAETPADPDAEMRGWLRSYATKHPCHGFRRAWAALRYDERREVNKKKIHR
* .*:*:*:*
Mvan_1112|M.vanbaalenii_PYR-1 LWREEGLRVPQRRRKTRLTGIGVAVGAMSPIRPNVIWAMDFQFDTAADGR
Mflv_4763|M.gilvum_PYR-GCK LWREEGLRVPQRRRKKRLTGIGVAVGAMSPIRPNVIWAMDFQFDTTADGR
MMAR_3784|M.marinum_M LWREEGLRVPQRRKKKRLTGIGVEVGAMSPICPNVIWAMDFQFDTTADGR
MSMEG_1866|M.smegmatis_MC2_155 LWREEGLQVRVHSPRKRAG--VSSIPPIEADAPNVVWAIDFQFDSTIDGK
*******:* : :.* : .:.. ***:**:*****:: **:
Mvan_1112|M.vanbaalenii_PYR-1 TLKMLNVIDEFTREALAIEVDRAINADGVVDVLDRLALTHG-APRYVRFD
Mflv_4763|M.gilvum_PYR-GCK TLKMLNVIDEFTREALAIEVDRAINADGVVDVLDRLALTYG-APHYVRFD
MMAR_3784|M.marinum_M TLKMLNVIDEFTREALAIEVDRAINADGVVAVLDRLTAQRA-TPHYVRFD
MSMEG_1866|M.smegmatis_MC2_155 AIKIASMIDEHTRVSLLNIVERSITADRLVEELKKVFVAAGGPPRVLRMD
::*: .:***.** :* *:*:*.** :* *.:: . .*: :*:*
Mvan_1112|M.vanbaalenii_PYR-1 NGPEFVAHAVADWCRFNSAGSLFIDPGSPLLTG-----------------
Mflv_4763|M.gilvum_PYR-GCK NGPEFVANAVADWCRFNSAGSLFIDPGSPWQNAWIESFNGRLRDELLNLW
MMAR_3784|M.marinum_M NGPEFVAHAVSDWCRFNSAGSLFIDPGSPWQNAWIESFNGRLRDELLNSW
MSMEG_1866|M.smegmatis_MC2_155 NGPEFISQALQQFCDG-RIGMSYIPPGTPWNNGHIESFNNRLRKECLNRN
*****:::*: ::* * :* **:* ..
Mvan_1112|M.vanbaalenii_PYR-1 --------------------------------------------------
Mflv_4763|M.gilvum_PYR-GCK RFDSLLEARVIIEDWRRDYNANRPHSAHGELTPAEFALQWTTTHQPQVA-
MMAR_3784|M.marinum_M RFDSLLEAQVLIEDWRRDYNANRPHTAHGELTPTEFALQWTTTHQPQAA-
MSMEG_1866|M.smegmatis_MC2_155 HWNTLLEARVVIGDFKDEHNHRHRHSALGYRTPAEYAAVCSCTHTPVACS
Mvan_1112|M.vanbaalenii_PYR-1 --
Mflv_4763|M.gilvum_PYR-GCK --
MMAR_3784|M.marinum_M --
MSMEG_1866|M.smegmatis_MC2_155 IN