For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VLRERFGVSERRACTVVGLHRSTMRLTPAPIATEEAELRAWLRRFSTDRPRWGWRRAAKMARKAGWKANN KRIRRLWREEGLRVPQRRRKKRLTGIGVAVGAMSPIRPNVIWAMDFQFDTTADGRILKMLNVIDEFTREA LAIEVDRAINADGVVDVLDRLALTHGAPHYVRFDNGPEFVTHAVSDWCRFNSAGSLFIDPGSPWQNAWIE SFNGRLRDELLNSWRFDSLLEARVIIEDWRCDYNANRPHSAHGELTPAEFALQWTTTHQPQVA
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_1111 | - | - | 100% (273) | integrase catalytic subunit |
M. vanbaalenii PYR-1 | Mvan_1112 | - | 1e-76 | 93.75% (144) | integrase, catalytic region |
M. vanbaalenii PYR-1 | Mvan_0580 | - | 1e-39 | 100.00% (75) | integrase, catalytic region |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_4763 | - | 1e-157 | 96.32% (272) | integrase catalytic subunit |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_2088 | - | 1e-07 | 23.14% (229) | transposase |
M. marinum M | MMAR_3784 | - | 1e-147 | 90.48% (273) | transposase, ISMyma01_aa2-like protein |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | MSMEG_1866 | - | 8e-57 | 44.77% (277) | transposase B |
M. thermoresistible (build 8) | TH_3317 | - | 2e-07 | 22.65% (234) | PUTATIVE Integrase, catalytic region |
M. ulcerans Agy99 | MUL_2691 | - | 1e-05 | 43.10% (58) | transposase ISMmr01_aa2-like |
CLUSTAL 2.0.9 multiple sequence alignment Mvan_1111|M.vanbaalenii_PYR-1 -------------------------------------------------- Mflv_4763|M.gilvum_PYR-GCK MPASGDHRVDVAPLDCPVRRHESQRGQTAQGTRSRERPAQEAGRQPGPRH MMAR_3784|M.marinum_M -------------------------------------------------- MSMEG_1866|M.smegmatis_MC2_155 -------------------------------------------------- MUL_2691|M.ulcerans_Agy99 -------------------------------------------------- MAB_2088|M.abscessus_ATCC_1997 -------------------------------------------------- TH_3317|M.thermoresistible__bu -------------------------------------------------- Mvan_1111|M.vanbaalenii_PYR-1 ----------------------MLRERFGVSERRACTVVGLHRSTMRLTP Mflv_4763|M.gilvum_PYR-GCK RHAQGDFGGKLLTPNRKRSAVIALRERFGVSERRACTVVGLHRSTMRLTP MMAR_3784|M.marinum_M ----------------------MLRERFGVSERRACTVVGLHRSTMRLQS MSMEG_1866|M.smegmatis_MC2_155 ----------------------MLTTTMGMSERLACKAVGLARSTCRRLP MUL_2691|M.ulcerans_Agy99 ---------------MRTGTVRHLQRVLAVSERFACRVTGQQRATQRHES MAB_2088|M.abscessus_ATCC_1997 ------------------------------MTRRVLKLARQPYYRWRANP TH_3317|M.thermoresistible__bu ---------MIAFIDAHRDQFGVELICRVLRAAIAGFLTSRGYRAAKARP . . : . Mvan_1111|M.vanbaalenii_PYR-1 APIA--TEEAELRAWLRRFSTDRPRWGWRRAAKMARKAG-WKANNKRIRR Mflv_4763|M.gilvum_PYR-GCK APVT--TEEAELRAWLRRFSTDRPRWGWRRAAKMARRAG-WKANNKRIRR MMAR_3784|M.marinum_M APIT--TEEAELRAWLRRFSTDWPRWGWRRAAKMARRAG-WAVNNKRIRR MSMEG_1866|M.smegmatis_MC2_155 LAETPADPDAEMRGWLRSYATKHPCHGFRRAWAALRYDERREVNKKKIHR MUL_2691|M.ulcerans_Agy99 CAAPSEGPDGALRDWLRQYAKDHPRRGFRPAYYDVRAET----------A MAB_2088|M.abscessus_ATCC_1997 ITDAELVEAYRANALFDAHGED-PEFGYRYLVEEAREAG-EPMAERTAWR TH_3317|M.thermoresistible__bu PSERAMRDELLIAELRTVHEQNFSVYGVKKMHHAMKRRG-WRVGREQTRR . . . . * : : Mvan_1111|M.vanbaalenii_PYR-1 LWREEGLRVPQRRR--KKRLTGIGVAVG------AMSPIRPNVIWAMDFQ Mflv_4763|M.gilvum_PYR-GCK LWREEGLRVPQRRR--KKRLTGIGVAVG------AMSPIRPNVIWAMDFQ MMAR_3784|M.marinum_M LWREEGLRVPQRRK--KKRLTGIGVEVG------AMSPICPNVIWAMDFQ MSMEG_1866|M.smegmatis_MC2_155 LWREEGLQVRVHSP--RKRAG--VSSIP------PIEADAPNVVWAIDFQ MUL_2691|M.ulcerans_Agy99 LLRK---------------------------------------------- MAB_2088|M.abscessus_ATCC_1997 ICSQQQLWSVFGKK--RGKNGKPGPPVHDDLVQRDFTAETPNMLWLSDIT TH_3317|M.thermoresistible__bu LMRKAGLRGVQRGKPVFTTISDPAHCRPADLVNRQFSAEAPDRLWVADIT : : Mvan_1111|M.vanbaalenii_PYR-1 FDTTADGRILKMLNVIDEFTREALAIEVDRAIN-ADGVVDVLDRLALTHG Mflv_4763|M.gilvum_PYR-GCK FDTTADGRTLKMLNVIDEFTREALAIEVDRAIN-ADGVVDVLDRLALTYG MMAR_3784|M.marinum_M FDTTADGRTLKMLNVIDEFTREALAIEVDRAIN-ADGVVAVLDRLTAQRA MSMEG_1866|M.smegmatis_MC2_155 FDSTIDGKAIKIASMIDEHTRVSLLNIVERSIT-ADRLVEELKKVFVAAG MUL_2691|M.ulcerans_Agy99 -------------------------------------------------- MAB_2088|M.abscessus_ATCC_1997 EHYTGDGK-LYLCAIKDAFSNRIVGYSIDSRMK-SRLATAALRNAVGRRG TH_3317|M.thermoresistible__bu FVRTWQGFCYTAF-VTDACTKAIKGWAVAASMRTEDLPLEAFNHAVWHSD Mvan_1111|M.vanbaalenii_PYR-1 --APHYVRFDN-GPEFVTHAVSDWCRFNSAGSLFIDPGSPWQNAWIESFN Mflv_4763|M.gilvum_PYR-GCK --APHYVRFDN-GPEFVANAVADWCRFNSAGSLFIDPGSPWQNAWIESFN MMAR_3784|M.marinum_M --TPHYVRFDN-GPEFVAHAVSDWCRFNSAGSLFIDPGSPWQNAWIESFN MSMEG_1866|M.smegmatis_MC2_155 G-PPRVLRMDN-GPEFISQALQQFCDG-RIGMSYIPPGTPWNNGHIESFN MUL_2691|M.ulcerans_Agy99 -------------------------------------------------- MAB_2088|M.abscessus_ATCC_1997 V-VAGCVVHTDRGSQFRSRKFVQALHHHGMVGSMGRVGAAGDNAAMESFF TH_3317|M.thermoresistible__bu SDLSELIHHSDRGSQYLSLTYTDRLAELGIAPSVGSRGDSYDNALAEAVN Mvan_1111|M.vanbaalenii_PYR-1 GRLRDELLNSWR-FDSLLEARVIIEDWRC-DYNANRPHSAHGELTPAEFA Mflv_4763|M.gilvum_PYR-GCK GRLRDELLNLWR-FDSLLEARVIIEDWRR-DYNANRPHSAHGELTPAEFA MMAR_3784|M.marinum_M GRLRDELLNSWR-FDSLLEAQVLIEDWRR-DYNANRPHTAHGELTPTEFA MSMEG_1866|M.smegmatis_MC2_155 NRLRKECLNRNH-WNTLLEARVVIGDFKD-EHNHRHRHSALGYRTPAEYA MUL_2691|M.ulcerans_Agy99 -------------------------------------------------- MAB_2088|M.abscessus_ATCC_1997 SLLQKNVLDRRR-WATREELRIAIVTWIERTYHRRRRQGALGRLTPVEYE TH_3317|M.thermoresistible__bu AAYKTELINRGKPWRSVDDVELATAGWVA-WYNQERLHEALGYVPPAEYE Mvan_1111|M.vanbaalenii_PYR-1 LQWTTTHQPQVA-------- Mflv_4763|M.gilvum_PYR-GCK LQWTTTHQPQVA-------- MMAR_3784|M.marinum_M LQWTTTHQPQAA-------- MSMEG_1866|M.smegmatis_MC2_155 AVCSCTHTPVACSIN----- MUL_2691|M.ulcerans_Agy99 -------------------- MAB_2088|M.abscessus_ATCC_1997 AIMTTTASQAA--------- TH_3317|M.thermoresistible__bu AALTGTSHPASQPTPALATN