For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSITDIPFAVLRFQYRLARTPLQLIERRFLTRVDTEAPARLLYERAIGAADAAAGSFLRDNELEESGITR IEKASALGEAARLDEVAAQQKEQAADELQRKRDKAATAPQKAGQEARQRVQNARQKADKRTQDVAQSVAS RTAQAKREVDEAAGRKVEAAEKAKRSMQNRSRAAEKVVTSVAEKELDDAASKRSAAAGARAHADRLADFS EAEKDKRQAEKSE
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_1035 | - | - | 100% (223) | hypothetical protein Mvan_1035 |
| M. vanbaalenii PYR-1 | Mvan_2169 | - | 3e-07 | 27.50% (160) | hypothetical protein Mvan_2169 |
| M. vanbaalenii PYR-1 | Mvan_1457 | - | 3e-06 | 26.38% (163) | TP901 family phage tail tape measure protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2952c | - | 6e-07 | 25.62% (160) | hypothetical protein Mb2952c |
| M. gilvum PYR-GCK | Mflv_5235 | - | 3e-74 | 62.10% (219) | hypothetical protein Mflv_5235 |
| M. tuberculosis H37Rv | Rv2927c | - | 6e-07 | 25.62% (160) | hypothetical protein Rv2927c |
| M. leprae Br4923 | MLBr_01661 | - | 6e-05 | 22.50% (160) | hypothetical protein MLBr_01661 |
| M. abscessus ATCC 19977 | MAB_1531c | - | 2e-06 | 28.87% (97) | hypothetical protein MAB_1531c |
| M. marinum M | MMAR_1780 | - | 1e-05 | 25.00% (160) | hypothetical protein MMAR_1780 |
| M. avium 104 | MAV_3785 | - | 9e-07 | 25.00% (160) | hypothetical protein MAV_3785 |
| M. smegmatis MC2 155 | MSMEG_1951 | - | 9e-37 | 39.63% (217) | hypothetical protein MSMEG_1951 |
| M. thermoresistible (build 8) | TH_2964 | - | 4e-26 | 42.45% (139) | PUTATIVE putative conserved hypothetical protein |
| M. ulcerans Agy99 | MUL_2028 | - | 9e-06 | 25.00% (160) | hypothetical protein MUL_2028 |
CLUSTAL 2.0.9 multiple sequence alignment
Mvan_1035|M.vanbaalenii_PYR-1 -----------------------------------MSITDIPFAVLRFQY
Mflv_5235|M.gilvum_PYR-GCK -----------------------------------MTITDLPFAVLRLQY
MSMEG_1951|M.smegmatis_MC2_155 ---------------------------------MHMRITDVPFAVLRLQY
TH_2964|M.thermoresistible__bu --------------------------------------------VLRLQY
MMAR_1780|M.marinum_M ---------------------------------MAVYRVFEALDELGAIV
MUL_2028|M.ulcerans_Agy99 ---------------------------------MAVYRVFEALDELGAIV
MLBr_01661|M.leprae_Br4923 ---------------------------------MAVYRVFEALDELGAIV
Mb2952c|M.bovis_AF2122/97 -----------------------------------MYRVFEALDELSAIV
Rv2927c|M.tuberculosis_H37Rv -----------------------------------MYRVFEALDELSAIV
MAV_3785|M.avium_104 -----------------------------------MYRVFEALDELSAIV
MAB_1531c|M.abscessus_ATCC_199 MTTTTLNESTRNFTRTRNGYDPIEVNEYISRLTIMHQSGLNDVETLKSRL
*
Mvan_1035|M.vanbaalenii_PYR-1 RLARTPLQLIERRFLTRVDTEAPARLLYERAIGAADAAAGSFLRDN-ELE
Mflv_5235|M.gilvum_PYR-GCK RIARTPLQLFESSVISRMDTEAPRRLMFERAVGSIDATVGNLLRDR-DLE
MSMEG_1951|M.smegmatis_MC2_155 QVARLPLQLIEDQVMTRLDPETPARLFYERSFGKLDETVGGALGAV-DLR
TH_2964|M.thermoresistible__bu QLARFPLQVIGDQFVARLDDESPARLWYEGSLGRLDAVIGGALGDE-ALR
MMAR_1780|M.marinum_M EEARG-VPMTAGCVVPRGDVLELLDDIKDAIPGELDDAQD-VLDAR-DSM
MUL_2028|M.ulcerans_Agy99 EEARG-VPMTAGCVVPRGDVLELLDDIKDAIPGELDDAQD-VLDAR-DSM
MLBr_01661|M.leprae_Br4923 EEARG-VPMTAGCVVPRGDVLELIDDIKDAIPGELDDAQD-VLDAR-DAM
Mb2952c|M.bovis_AF2122/97 EEARG-VPMTAGCVVPRGDVLELIDDIKDAIPGELDDAQD-VLDAR-DSM
Rv2927c|M.tuberculosis_H37Rv EEARG-VPMTAGCVVPRGDVLELIDDIKDAIPGELDDAQD-VLDAR-DSM
MAV_3785|M.avium_104 EEARG-VPMTAGCVVPRGDVLELIDDIKDAIPGELDDAQD-VLDAR-DSM
MAB_1531c|M.abscessus_ATCC_199 EDATKQISSLKDEVTTLSDTSPSAHAMTDRMAKMLRIAVDEVAEMQNEAR
. * : . . * : . .
Mvan_1035|M.vanbaalenii_PYR-1 ESGITRIEKASALGEAAR-----LDEVAAQQKEQAADELQRKRDKAATAP
Mflv_5235|M.gilvum_PYR-GCK QSGITRIERAVELAEAAR-----LDEVADQKKRQAGDELKEKRDQAVAAP
MSMEG_1951|M.smegmatis_MC2_155 ERGSALVERSNALLRAIQ-----LEAEATRNTREADAELREAQAEAAEDL
TH_2964|M.thermoresistible__bu RRGAARMDRSAALGRAAR-----LDDTATERVQAADAELRHTREQAEQRQ
MMAR_1780|M.marinum_M LQEAKAHADSMVSSATTE-----SESMLNHARAEADRILSDAKAQADRMV
MUL_2028|M.ulcerans_Agy99 LQEATAHADSMVSSATTE-----SESMLNHARAEADRILSDAKAQADRMV
MLBr_01661|M.leprae_Br4923 LNDAKAHADSMVSSATTE-----SESLLSHARAEADRILSDAKSQVDRMA
Mb2952c|M.bovis_AF2122/97 LQDAKTHADSMVSSATTE-----AESILNHARTEADRILSDAKAQADRMV
Rv2927c|M.tuberculosis_H37Rv LQDAKTHADSMVSSATTE-----AESILNHARTEADRILSDAKAQADRMV
MAV_3785|M.avium_104 LSDAKTHAESMVSSATTE-----SESMLNHARAEADRVLSDAKAQADRMV
MAB_1531c|M.abscessus_ATCC_199 TESAALIASAKADAEAMRTKHKELLADMAARQSALETEYTEVMARAREEA
: : . ..
Mvan_1035|M.vanbaalenii_PYR-1 QKAGQEARQRVQNARQKADKRTQDVAQSVASRTAQAKREVDEAAGR----
Mflv_5235|M.gilvum_PYR-GCK QKAREEAKERVQEARAEAEQGKRQAAENVAKRTSQAEEQIDQSAQQ----
MSMEG_1951|M.smegmatis_MC2_155 KDARADREQNVKEARSTALQRKQAAEQARQKRTQTAKAKTDEVAAK----
TH_2964|M.thermoresistible__bu HAAQATTQQQVREARETAENRKRDAAVTAQR--GTAAAKRQAXXXX----
MMAR_1780|M.marinum_M GEARQHSERMVGEAREEAIRIAAAAKREYEASMSRAKSECDRLIESGNIS
MUL_2028|M.ulcerans_Agy99 GEARQHSERMVGEAREEAIRIAAAAKREYEASMSRAKSECDRLIESGNIS
MLBr_01661|M.leprae_Br4923 SEARQHSERMLGDAREESIRIATVAKREYEASLNRAQSECDRLIENGNIS
Mb2952c|M.bovis_AF2122/97 SEARQHSERMVADAREEAIRIATAAKREYEASVSRAQAECDRLIENGNIS
Rv2927c|M.tuberculosis_H37Rv SEARQHSERMVADAREEAIRIATAAKREYEASVSRAQAECDRLIENGNIS
MAV_3785|M.avium_104 SEARQHSERMVAEAREEAVRIATAAKREYEASVSRAQAEADRLLENGNIS
MAB_1531c|M.abscessus_ATCC_199 NQIVAQAVSESERLRAAEAKRREKAETELDEELTKLRTDTQSAVDEQRRS
* . . . :
Mvan_1035|M.vanbaalenii_PYR-1 -KVEAAEKAKRSMQNRSRAAEKVVTSVAEKELDDAASKRSAAAGARAHAD
Mflv_5235|M.gilvum_PYR-GCK -RKQNAEKAKQNVQNRSRAAEKAEVKVAEEQLDDAADKRSAAVGARAHAD
MSMEG_1951|M.smegmatis_MC2_155 -RKEVAQTAKQRKEEAINTVEQAKTKNARAKLADAQETRVEAAEKIVEAD
TH_2964|M.thermoresistible__bu -RGGTRRRPRRRN------LRRSRPRHGSRR-------------------
MMAR_1780|M.marinum_M YENAVQEGIKEQQRLVSQNEVVQAANAEATRLVDTAHAESDRLRGECDVY
MUL_2028|M.ulcerans_Agy99 YENAVQEGIKEQQRLVSQNEVVQAANAEATRLVDTAHAESDRLRGECDVY
MLBr_01661|M.leprae_Br4923 YEKAIQEGIKEQQRLVSQNEVVQAANAESTRLIDTAHAEADRLRGECDIY
Mb2952c|M.bovis_AF2122/97 YEKAVQEGIKEQQRLVSQNEVVAAANAESTRLVDTAHAEADRLRGECDIY
Rv2927c|M.tuberculosis_H37Rv YEKAVQEGIKEQQRLVSQNEVVAAANAESTRLVDTAHAEADRLRGECDIY
MAV_3785|M.avium_104 YEKAVQEGIKEQQRLVSQNSVVEAAHAEATRLIDSAHAEADRLRGECDIY
MAB_1531c|M.abscessus_ATCC_199 IQGECEKRLADAKDEADRRLRLADEQIERRLDQARRSVEEIGQQRISILE
. .
Mvan_1035|M.vanbaalenii_PYR-1 RLADFSEAEKDKRQAEKSE--------------------------
Mflv_5235|M.gilvum_PYR-GCK KLEDYSETEKLKRQAAADKP-------------------------
MSMEG_1951|M.smegmatis_MC2_155 QIEEWAEAEKAKRS-------------------------------
TH_2964|M.thermoresistible__bu ---------------------------------------------
MMAR_1780|M.marinum_M VDTKLAEFEEMLNGTLRSVGRGRHQLRTAAGTHDYATR-------
MUL_2028|M.ulcerans_Agy99 VDTKLAEFEEMLNGTLRSVGRGRHQLRTAAGTHDYATR-------
MLBr_01661|M.leprae_Br4923 VDNKLAEFEEFLNGTLRSVGRGRHQLRTAAGTHDYVTR-------
Mb2952c|M.bovis_AF2122/97 VDNKLAEFEEFLNGTLRSVGRGRHQLRTAAGTHDYAVR-------
Rv2927c|M.tuberculosis_H37Rv VDNKLAEFEEFLNGTLRSVGRGRHQLRTAAGTHDYAVR-------
MAV_3785|M.avium_104 VDNKLAEFEEFLNGTLRSVGRGRHQLRTAAGTHDYAVR-------
MAB_1531c|M.abscessus_ATCC_199 QLMGVHGRLESIPSALESAYRDRDNSKSIVMVPSKRVLDQKVIEG