For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSDDKAAQTRKSFVEALKGKAKEVAGAITGNDSLTAEGQLEQAEAKERRAASRNEAEADAEAAQAREKAG EAELRGAQQRARAEVQAATAESAVRSEQAARRQMAEESGRRDVAGAQSAFEADVQREAQRATAERRGRVA DAAEEYHEAAADYQQKTAEAERAEADADRLRRQAAAADDHPKLP
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_1034 | - | - | 100% (184) | CsbD-like protein |
M. vanbaalenii PYR-1 | Mvan_4701 | - | 7e-11 | 48.53% (68) | CsbD family protein |
M. vanbaalenii PYR-1 | Mvan_1428 | - | 1e-08 | 30.85% (188) | band 7 protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_5236 | - | 9e-61 | 69.77% (172) | CsbD family protein |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_2518 | - | 1e-09 | 45.45% (66) | hypothetical protein MAB_2518 |
M. marinum M | MMAR_2989 | - | 8e-10 | 42.86% (77) | hypothetical protein MMAR_2989 |
M. avium 104 | MAV_3734 | - | 2e-11 | 47.14% (70) | hypothetical protein MAV_3734 |
M. smegmatis MC2 155 | MSMEG_1950 | - | 4e-41 | 48.89% (180) | hypothetical protein MSMEG_1950 |
M. thermoresistible (build 8) | TH_1853 | - | 2e-11 | 36.91% (149) | conserved hypothetical protein |
M. ulcerans Agy99 | MUL_2228 | - | 5e-09 | 41.56% (77) | hypothetical protein MUL_2228 |
CLUSTAL 2.0.9 multiple sequence alignment Mvan_1034|M.vanbaalenii_PYR-1 -------------------------------------------------- Mflv_5236|M.gilvum_PYR-GCK -------------------------------------------------- MSMEG_1950|M.smegmatis_MC2_155 -------------------------------------------------- MMAR_2989|M.marinum_M -------------------------------------------------- MUL_2228|M.ulcerans_Agy99 -------------------------------------------------- MAV_3734|M.avium_104 -------------------------------------------------- MAB_2518|M.abscessus_ATCC_1997 -------------------------------------------------- TH_1853|M.thermoresistible__bu MRLHRLALTNYRGIARREVEFPDRGVVVVSGANEIGKSSMIEALDLLFHA Mvan_1034|M.vanbaalenii_PYR-1 -------------------------------------------------- Mflv_5236|M.gilvum_PYR-GCK -------------------------------------------------- MSMEG_1950|M.smegmatis_MC2_155 -------------------------------------------------- MMAR_2989|M.marinum_M -------------------------------------------------- MUL_2228|M.ulcerans_Agy99 -------------------------------------------------- MAV_3734|M.avium_104 -------------------------------------------------- MAB_2518|M.abscessus_ATCC_1997 -------------------------------------------------- TH_1853|M.thermoresistible__bu KDRSTKKEVKQVKPTHADVGAEITAEISTGPYRFVYHKRFHKKCATQLTI Mvan_1034|M.vanbaalenii_PYR-1 ---------------------------------------MS---DDKAAQ Mflv_5236|M.gilvum_PYR-GCK -------------------------------MPDPRRSEMSQ--DDKAAQ MSMEG_1950|M.smegmatis_MC2_155 ---------------------------------------MTQ--HSKSDQ MMAR_2989|M.marinum_M ---------------------------------------MAD--KSGPQE MUL_2228|M.ulcerans_Agy99 ---------------------------------------MAD--KSGPQE MAV_3734|M.avium_104 ---------------------------------------MAEENKSGPAE MAB_2518|M.abscessus_ATCC_1997 ---------------------------------------MTEK-NSGPQE TH_1853|M.thermoresistible__bu LAPRREELSGDEAHERALAMLSETVDMELWRTQRVLQAGSTAPVDLSGCD : . : Mvan_1034|M.vanbaalenii_PYR-1 TRKSFVEALKGKAKEVAG-----------------AITGNDS---LTAEG Mflv_5236|M.gilvum_PYR-GCK TRKSFAESVKGKAKELAG-----------------AVTGNDS---LTAEG MSMEG_1950|M.smegmatis_MC2_155 ARKSFIDSVKGTAKEVVG-----------------AVTGNDS---LTAEG MMAR_2989|M.marinum_M AVEGVVEGAKGKAKEVFG-----------------AVTGRDD---VKREG MUL_2228|M.ulcerans_Agy99 AVEGVVEGAKGKAKEVFE-----------------AVTGRDD---VKREG MAV_3734|M.avium_104 AVKGVVEDVKGKAKEAVG-----------------AVAGRDD---LTREG MAB_2518|M.abscessus_ATCC_1997 AVRGVVEDVKGKAKEAAG-----------------TVTGRDD---LIEEG TH_1853|M.thermoresistible__bu ALSRALDAVAGEAVQTSGTEPLLIDRIDAEYRKYFTATGRPTGEWLAATK : : * * : : :*. : Mvan_1034|M.vanbaalenii_PYR-1 QLEQAEAKERRAASRNEAEADAEAAQAREKAGEAELRGAQQRARAEVQAA Mflv_5236|M.gilvum_PYR-GCK QLEQAEAKERREASRKEAEADAEAAQAQAQAREARLEGAQERAAAEVRAA MSMEG_1950|M.smegmatis_MC2_155 QLEKTQAKERREAGRAAAVADAEARQARAEEAQAQADGAQKRAAVAAEAA MMAR_2989|M.marinum_M QAQQDKADAQRDAAKKEAEAEAARRGADV---------AEERQKANQ--- MUL_2228|M.ulcerans_Agy99 QAQQDKADAQRDAAKKEAEAEAARRGADV---------AEERQKANQ--- MAV_3734|M.avium_104 QAQQDKAEAQRDAAKKEAEAEAARGGAEA---------AEERQRANQ--- MAB_2518|M.abscessus_ATCC_1997 KAQQDKAQAQREAAQKEAEAEKSRAEAKS---------DEKRQKAHE--- TH_1853|M.thermoresistible__bu RLQAADEQVARCAARVAEVEDAVRRHATLTESLAELEDGRRTADAQLAAA : : . . * *.: : * .. . Mvan_1034|M.vanbaalenii_PYR-1 -------------------------TAESAVRSEQAARRQMAEESGRRDV Mflv_5236|M.gilvum_PYR-GCK -------------------------GVETQVSADQAAARQSVEEAGRRDV MSMEG_1950|M.smegmatis_MC2_155 -------------------------VVENDVRAQQDAQKREAEAAARRDA MMAR_2989|M.marinum_M -------------------------------------------------- MUL_2228|M.ulcerans_Agy99 -------------------------------------------------- MAV_3734|M.avium_104 -------------------------------------------------- MAB_2518|M.abscessus_ATCC_1997 -------------------------------------------------- TH_1853|M.thermoresistible__bu REAAEAVERLTRQLAEAQLAAEAAEATHTASVAALNERRRLRAEIEERTA Mvan_1034|M.vanbaalenii_PYR-1 AGAQSAFEADVQREAQRAT----------AERRGRVADAAEEYHEAAADY Mflv_5236|M.gilvum_PYR-GCK ARAQTQAEAKVAQESARAQ----------AEQREEIVEAAEEYQEAAADY MSMEG_1950|M.smegmatis_MC2_155 ERQKTQADIDAQREVQLAD----------AAERSDVAVARQEAAEAAADH MMAR_2989|M.marinum_M -------------------------------------------------- MUL_2228|M.ulcerans_Agy99 -------------------------------------------------- MAV_3734|M.avium_104 -------------------------------------------------- MAB_2518|M.abscessus_ATCC_1997 -------------------------------------------------- TH_1853|M.thermoresistible__bu AVAALQPEVDAALEAEATAREVQQEADTAAERAREAADAARERVDTARQA Mvan_1034|M.vanbaalenii_PYR-1 QQKTAEAERAEADADRLRRQAAAADDHPKLP------------------- Mflv_5236|M.gilvum_PYR-GCK QEATSEAARAEAQAERLRQRAN--DSTPT--------------------- MSMEG_1950|M.smegmatis_MC2_155 QDAVKESADVRARADRMRQEADKLTEEADLPGDEK--------------- MMAR_2989|M.marinum_M -------------------------------------------------- MUL_2228|M.ulcerans_Agy99 -------------------------------------------------- MAV_3734|M.avium_104 -------------------------------------------------- MAB_2518|M.abscessus_ATCC_1997 -------------------------------------------------- TH_1853|M.thermoresistible__bu VQRLADRAERDTLADRLRRIDAAATELARVDGELATLTVTEAALRQIEAA Mvan_1034|M.vanbaalenii_PYR-1 -------------------------------------------------- Mflv_5236|M.gilvum_PYR-GCK -------------------------------------------------- MSMEG_1950|M.smegmatis_MC2_155 -------------------------------------------------- MMAR_2989|M.marinum_M -------------------------------------------------- MUL_2228|M.ulcerans_Agy99 -------------------------------------------------- MAV_3734|M.avium_104 -------------------------------------------------- MAB_2518|M.abscessus_ATCC_1997 -------------------------------------------------- TH_1853|M.thermoresistible__bu ELAVERAAGQAELASAHIELTAAVDLELRVGDEQLTIPAGGSWTAGATAP Mvan_1034|M.vanbaalenii_PYR-1 -------------------------------------------------- Mflv_5236|M.gilvum_PYR-GCK -------------------------------------------------- MSMEG_1950|M.smegmatis_MC2_155 -------------------------------------------------- MMAR_2989|M.marinum_M -------------------------------------------------- MUL_2228|M.ulcerans_Agy99 -------------------------------------------------- MAV_3734|M.avium_104 -------------------------------------------------- MAB_2518|M.abscessus_ATCC_1997 -------------------------------------------------- TH_1853|M.thermoresistible__bu TEIELPGLLTARIVPGAPAAQMQETLDVARAALADALQHAGVADVASARS Mvan_1034|M.vanbaalenii_PYR-1 -------------------------------------------------- Mflv_5236|M.gilvum_PYR-GCK -------------------------------------------------- MSMEG_1950|M.smegmatis_MC2_155 -------------------------------------------------- MMAR_2989|M.marinum_M -------------------------------------------------- MUL_2228|M.ulcerans_Agy99 -------------------------------------------------- MAV_3734|M.avium_104 -------------------------------------------------- MAB_2518|M.abscessus_ATCC_1997 -------------------------------------------------- TH_1853|M.thermoresistible__bu QVERRRELSTARETFAATVVALTGEDTLERLRARLAELDAAASDDTGELG Mvan_1034|M.vanbaalenii_PYR-1 -------------------------------------------------- Mflv_5236|M.gilvum_PYR-GCK -------------------------------------------------- MSMEG_1950|M.smegmatis_MC2_155 -------------------------------------------------- MMAR_2989|M.marinum_M -------------------------------------------------- MUL_2228|M.ulcerans_Agy99 -------------------------------------------------- MAV_3734|M.avium_104 -------------------------------------------------- MAB_2518|M.abscessus_ATCC_1997 -------------------------------------------------- TH_1853|M.thermoresistible__bu VDDAQAELTAAERAYQQAHTDCETHRKAAVLAARRLAEKSQTAAALREKL Mvan_1034|M.vanbaalenii_PYR-1 -------------------------------------------------- Mflv_5236|M.gilvum_PYR-GCK -------------------------------------------------- MSMEG_1950|M.smegmatis_MC2_155 -------------------------------------------------- MMAR_2989|M.marinum_M -------------------------------------------------- MUL_2228|M.ulcerans_Agy99 -------------------------------------------------- MAV_3734|M.avium_104 -------------------------------------------------- MAB_2518|M.abscessus_ATCC_1997 -------------------------------------------------- TH_1853|M.thermoresistible__bu TAARTELDTAAARLAAQRADVDDETLVVRAAAHGEEAERAAVRVAQLNAE Mvan_1034|M.vanbaalenii_PYR-1 -------------------------------------------------- Mflv_5236|M.gilvum_PYR-GCK -------------------------------------------------- MSMEG_1950|M.smegmatis_MC2_155 -------------------------------------------------- MMAR_2989|M.marinum_M -------------------------------------------------- MUL_2228|M.ulcerans_Agy99 -------------------------------------------------- MAV_3734|M.avium_104 -------------------------------------------------- MAB_2518|M.abscessus_ATCC_1997 -------------------------------------------------- TH_1853|M.thermoresistible__bu LSAAQPDQVAAALDTAARHAETVHAEHRRTADALRELNAQLEVYGSEGRK Mvan_1034|M.vanbaalenii_PYR-1 -------------------------------------------------- Mflv_5236|M.gilvum_PYR-GCK -------------------------------------------------- MSMEG_1950|M.smegmatis_MC2_155 -------------------------------------------------- MMAR_2989|M.marinum_M -------------------------------------------------- MUL_2228|M.ulcerans_Agy99 -------------------------------------------------- MAV_3734|M.avium_104 -------------------------------------------------- MAB_2518|M.abscessus_ATCC_1997 -------------------------------------------------- TH_1853|M.thermoresistible__bu GELDAAKAEREQAEAEFLRIGRLARAVKLLRETMLRHRDASRRRYVDPFR Mvan_1034|M.vanbaalenii_PYR-1 -------------------------------------------------- Mflv_5236|M.gilvum_PYR-GCK -------------------------------------------------- MSMEG_1950|M.smegmatis_MC2_155 -------------------------------------------------- MMAR_2989|M.marinum_M -------------------------------------------------- MUL_2228|M.ulcerans_Agy99 -------------------------------------------------- MAV_3734|M.avium_104 -------------------------------------------------- MAB_2518|M.abscessus_ATCC_1997 -------------------------------------------------- TH_1853|M.thermoresistible__bu AEVERLGRIVFGDSFEVEIDSDLCIRSRTLAGRTVDYESLSGGAKEQLGI Mvan_1034|M.vanbaalenii_PYR-1 -------------------------------------------------- Mflv_5236|M.gilvum_PYR-GCK -------------------------------------------------- MSMEG_1950|M.smegmatis_MC2_155 -------------------------------------------------- MMAR_2989|M.marinum_M -------------------------------------------------- MUL_2228|M.ulcerans_Agy99 -------------------------------------------------- MAV_3734|M.avium_104 -------------------------------------------------- MAB_2518|M.abscessus_ATCC_1997 -------------------------------------------------- TH_1853|M.thermoresistible__bu VARLAGAALVARDDTVPVVIDDALGFTDAERLVKMGAVFDAVGGDGQVIV Mvan_1034|M.vanbaalenii_PYR-1 --------------------- Mflv_5236|M.gilvum_PYR-GCK --------------------- MSMEG_1950|M.smegmatis_MC2_155 --------------------- MMAR_2989|M.marinum_M --------------------- MUL_2228|M.ulcerans_Agy99 --------------------- MAV_3734|M.avium_104 --------------------- MAB_2518|M.abscessus_ATCC_1997 --------------------- TH_1853|M.thermoresistible__bu LTCSPDRYAGISDAHRIELTA